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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0345700 |
| Transcript ID | LotjaGi5g1v0345700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger family protein; TAIR: AT2G02070.1 indeterminate(ID)-domain 5; Swiss-Prot: sp|Q9ZUL3|IDD5_ARATH Protein indeterminate-domain 5, chloroplastic; TrEMBL-Plants: tr|A0A1J7HJ99|A0A1J7HJ99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0345700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66220943..66228264) extracted from Lotus japonicus Gifu genome v1.2.
TGATGAGTGAAAGTTTGTCTGAGAGTGAGTGAGAAGATACGAAATAAGAGATAGAGAGAGAGAGTGTGGCGTAGCTGTTT CATGCTGCTTTCACACTTCCTATGTCGTTATGTGACTCAGGATTGGGTCCACCGACCGTAGGCCTTACCCTCTCTCTATC ACTCTCTCTCTCTCCCATGAAATTTTTTCATATTTGTAAAAAGAAAATTCATTGATTTATGACAAGAGAGAGGTGAGCAA AATCTGGAATAAAGCTTTTGAAGAGGAAAAAAAGGCAGAGAATAATAAAGAGAAGAGCAAAAAAAAAATGCCTTGTGTAT ATGTGTTGGTGTATCTGCATGACACCGAATCACTAGTGAAGAAACTCTGTTGTGGTGATGTTATTATTTTCCCTTCCTCA AATTTCTTCTCATTTATAACAAGCCAACCTCAGCACAAGGAAAAAATTTATATCAAGTAGTGAGAATTCAATTCATCACA CCATGGTGATGGTGGGGTTGATTAATTCTATTTTTGCTCTTTTTCTTCATTCATCTTAGATAGTACTAGCTAGCTTGCTC TTTCTTCATCTTTTGTTGTTGATTTACAAGAATTCTCTATTAATCTTGATAAGTTCTGTGAGATTAATTGGGGGTGTGAA TTGAAGAGGACTACTCATGCATGTGGGTTTTCCAGAATTCTGATTGAAGAAGAAGTAGAAAGAAGGTTACTTAATTACTA CTGTAAGAGATATGGCAGCATCGTCTTCCTCAGCATCACTCTTTGGATTCAGAGAAGAGGATAATCAGATGAACCAACAG CAGCAACATTCCCTGGTGGCAGCAGCACCATCCTCTTCAGCAACTCCATCTGCACCACCACCCCAGAAGAAAAAAAGAAA CCAACCTGGAACACCAAGCAAGTATCTCAATTTTATCAGAAAAAAAGATCTATCTCTTATATCAATGACAATTTTTTTTC TTTCATAGATTTTCTCTATTTTCACTCCACAAAAACATTTTCTGGGCTACCATTTTTTCTTCATTTTATATAAACGGGTT CGGATCCTCTCCAGCAACAAGTCTCTCTGCAGCCTTTCTCCTGAACAATTTTAACCATTGATTCTCATAGCTAATTATGA AAATTAACTTATATTTTTTATATGTCGCAGAGGCAGCAGAGAATCTGAATCCAGATATGAAACCCTAATTAATTTTTAAG AAGTTAAAATGTATTGGAATTCAATTCAATGGGGGATGTTTAGGAAATCTTTGTCTTCAAGCTTTGTCAATTTGTTTTAT TTATTTATTATTGTTGCCTTGTGAATTTTGTAATAATTTGTTTTGTTTTGGCATTTTTCCATGGAAACAGATCCAGATGC AGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAA GGGAGCAAAACTTGCAACTCCACAGAAGAGGACACAACTTGCCTTGGAAGCTTAAGCAGAAGACAAACAAAGAGCCAAAG AGAAAGGTTTATCTGTGCCCTGAGCCCACATGCGTCCACCATGACCCTTCAAGGGCTCTGGGCGACCTCACAGGGATCAA GAAGCATTACTCTCGCAAACATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATATGCTGTTCAATCTGATT GGAAAGCTCATTCTAAGACTTGTGGCACCAGGGAATACAGATGTGACTGTGGCACTCTCTTCTCCAGGTAACTAATTCTT CTTCAATTAACACCACATCAAGTTACTCTTTTATTTCTCCAAACGGTTAAATGTTTTTTACTAACTAAGCTAGCGTTTTC ATCATGCAATTTTTGGTATGTCTAGCTATAGGCTAGGCTAATTCCAAGAATGGTAATAAGCAGCTGAAGGAAAGAAAAAG CTTTGTTTGGTTTTGGCTTGTTTGGGGTTTGGGTTAGGGCTTCATTAGATTCCTTACAGCGTGTTTGGATTGTCAGTTGA CATATAATCCAAAACAGTCGGAAGCTACAATTTCTACTACTTTGAAGTTATGATCAATTTTGAAGGGAAACTTATGTATG TCCGTATGTAGTTTCTGGGTTTTACAATTGATTTTGATAGCAGGAAAACTGTTCCAAATATTCTAAAACCTTGTTTGGCC GGATAAACTTCTCTTTCATCATAGTCAATTATGAAACCCAAAAAACCACTCACAAAATTAGCTTCTCCATCAAATTTATT GTGGTTTCAAGAATCAACAAATATGCACTAATTATCAAAGCTTTTCCGTAAAGTTGACTCTGACTTCAGAATCAATTATT GAAACTTTTTCAAACATGCACTAGTAGTTTTTCCCATAAGTGATTATGAGAGTAGCAATCGATCACATGACCAAAAATGC TAATAGTGATGAAAAGGCCTTAGATGCTTTTCTTTATGTGTTTGTGTTTGGTTTCATTCCAATTGATTGATTAAGATTCT GTCCTCTCTCTTCTCGTATGGTTTCCTTTGTCATCTTACGTGAAATAATAATATTGGATGGAAGAAACATCCCCCCACGT GAATCTATCACTGGAAACTGCCTTGGTCGTAGGGGTTTCAGAAAAACAAACACACACGGAGGAACAGCAACCATCAAAAA GCATAATGGAAAAAACACTTCACCTTTTTCATTCATTTTACCTCGAAAACAGTGCTGTTTTTTTCTGATCTCGATCAATT CTTTGTGTTTTTTTTTCTCTTCCTGTTCACGTGTTGCTATGCCATGAAGAGAGGAGAGAGAGTGTGTTTGTGTGTGGTGT TCTGATATGTTGTTGTTAGCAGCTTTGTTTTCTTCTGGGTTGGCTAGATGTGTACAGTACTGTGCTCTTGCAGGTGCACC TTTTCATGATAACGTTAGGGCCTATTCATGGATTCAACTCCTCCCTCTCTCTTTCTATTTCTTGTCTACTATTTTTCTTT CTTTTCTTTCCAAAAATGATTTGAGATTCAGCATATTTATACAGAAAAATTACAGGTAGTCAAAATCATGCATAACAGAA AAAACTTTAGTTCCTTTGCTCTTAATTTTATGCTCTTAATTTTATTTATCATGATTTTGATTTCATAGTGAATTTTTACC GTTTACCCAATCAGACACTTAATTTAAAGGAATCATGCTGAATGAATAACATGTTTAGATAAGTTTTTCTCTTATTAAAA ACAATTATGACACTCATAAGCTAATTCTTGTAAGCTTTTTCTCAAAACTAATTTTAATTTGTTAATTATGTAATGAACAT ATATGAAGTGCCTAATGAATGTTCATGATTGAATATAAAGTATGCACATTTTGGTTGAGAATTTTGATTTGCCTATATAA GAGTCAACCTCAGCCTAGTTTTAGCACAAGTAGTCACACGATCCTTTTCAACGTTGAATACATTCTTTGGGTTCCATTTA TTGAACACCCAGTCTATACATTTGCCCTTCTTCCTTCATTGATTGGTTTTTTTTTTGTAGTTAATTCTGGTGAAATATTC CACCCTGCAAGCGTTTATGTTACTTATGTCTTTATAGGAATTTTTAGTAAACTTCTTAATCACTTGCAGAGTCATTCACA TTATTATTTTATCTGGCTACTAGTTTCAAAAATATACGCAAGTATTTGTCCTCAGGTTAATTAAGATTTTCACTCTTTTA TCTGGATGTGTATATTTTTTTACGTGATTAATTAGCTTTTTTTTGTCTTTTACTTGGAAAAGCCAAGTTCTCCTCCTAGT AATCTATGTATACTTCAGTACATGTGATTACAGTTTTACACATCACTTATAATTTCATGTAATGCCGCTTTTCATGTATC AGTAAAACATTTTATTTTTCCTACCAGTCGGTCTCTGCTGACAATGACACTATAGATTAATTTCATAATTATCAGTTGTA AGCATATAGTTACGAAAATAATCAAGATTTGTAATATCATAAAAATAATAATTAGGGTTTGATTAAATTTGGAATTGTAA TTACTGCAGGAGAGACAGTTTCATCACCCACAGGGCCTTCTGTGATGCATTGGCACAAGAGAGTGCAAGACAACCTCCAA ACCTGAGCAGTGCCATTGGCAGCCATCTATATGGGAGCAGCAGCAACAATATGGGGTTAGCCTTATCCCATGTGGGACCT CAATTGTCCAACATGCAACCATCAGACCTAAACAACAACAACCAGTCAGCTGAGCTCTTGCGGCTCGGTGGCGCGGCCGG TCGGACCGGAGTGCAATTTGACCAAATGTTCCAAACAAGCCTTGGCCCAGCCTCCTTCAGACCTACACAGCAAAGCGTGG CCTCCTTCTTCTTGCCTCATGAGTCGAACCAGAACTACCACCATGATCAGCAGCAACAACAACAAGGGTTGGTGCAGCAA AACAAGTCGTTTCAAGGGCTAATTCAATTGTCTGAACTCAACAACCACCACCATCACAATCACAACAACAATTCTCCATC AGGTTAGTCATCACAGACCTAGGTTGATGATGAAAAATGGGGCAATTAAGAAAAAAATATCTTCATAATATAATAAAATT TACCTTCTTAAAAAATCATACTTTAATTATCTGATTTGTTTTCTCAATTTTAAAAACAATTTTTAGAAAAAAAATTAGAA TGCTGTTTTTCAAAACTAAAATCATGCCCTAACTCTTTCAATTAATCTCACCTACCATTTCAGGTGGTGCCAACAACAAC AGCCTCTTCAACCTTCCATTCCTTTCAAGCAACAACAGCACCAACAGCAGCAACACCTCCTTCTCGGACCACTTCAATGA AAATGGTAGTGTCAACGACCAAGCCACCAATTTCTTCACCGGCAACGTGATGGGTGGCGGTGGCGGCGGCGGTAGTCATC AGCAGCACCACCAAACAACAGCAACAACCTCCGCTGCTCCTTCTCTGTTCAGCACATCCCTCCAAGCCAACAACAGTGCA ATGGCTCACATGTCTGCAACTGCACTCCTTCAGAAAGCTGCTCAATTGGGTACAACTTCAAGCAACAGCACCGCTTCTCT GTTGAAAAGCTTTGGAAGCTCTTCCTCTAGCAGTGCACCCAAACCAATGGCTGGTGCTGCTGCAAACTATGGCGGCGTCG GCGTCGGTATGTTCAACGAGCAGAACAACCTGCAGGACTTGATGAACTCGTTTGCTGCGGCAAGTGGCAGCGGCGGCCAT AACAATGTTTCCTCCATGTTTGAAACTGGGGGGTTTGAGGCTTATGATCGTGCAGGTGGTGTGAGTAGGGATCAGCAGAA GATGCAGGCGGCGATGAGCATTGGAGGGTCTGATAGGCTGAGTACTCGTGATTTTCTTGGTGTTGGTCAGATTGTGAGAA GCATGAGTGGTGGTGGACAAAGAGAACAGCAACATGCTTTTAATGCTTTGGAGGCAGAGAGAAATGCTGCTGCTGCTACA GCTGCGCCGTCAGGGCAATCTTTTGGAGGTGGTGGAGGGAATTTTCAGTGACAAAGCAAATCATCAGAAAGTAATTGAGA ACAAAGGTACGTTTATTACTATGTTCTAGTTTCTACACACACATTCACATGTAACTTTTTGTTTTCATCTATTACGTGCA TGTTTGAATACACAATGCAAAATTATAGTGGAGCTAAAATTACGGTGGACAATCACAAAAATTAACTGAGGTTACTTTTG TTGTCCACTATAATTTTAGCTACAATATAATTTTCTTGTGTGTTGTCAATTATAATTCTAAATTCAGATATTTAAGTAAT TTAACAATTTGATTAAGGTTGAATAATTCATATATTTCATTAAGATGAAACTATTCTAAAACTCAAATTTCTTATGCTCG TAAATTTAGTATTTTCTTAAGTACATTGAATTATATGATATATCATGTTTAATTTGTCTTTGTAGTGCTATTTTTCTTAT CCACCTTGATATATTTATATTCAACTTTTCTTAAAATTTATTTTTACTATTTTTTTATACTTTTCTTTTATTTCTATTCC ATCACTTATCATATTTATCATTTTTCATCTACTCTCCCTATGTCTCTGTAAAAATGTACCTAGAAGGAGTGTCAACACAA TATTTTTCTTTCCTTATTCAACTAGTCAACATGAGTTCAATGACCTTATTATAAAATGATTATTGTTGTGATCAAGGAAT GATTTTCCTTGATGGGTGTGTTTCTAGGGAGGGGTTAGTAGTAGTAGTACTGTTTAATTATTCAATGATGAGGTTTGAGG ACTCGATAGATTCTTCCTTTTTTTTTTTCATTTCCAATTTCTTGAAAAAGGGAGTGTGTGCTCTGACAAGCTGTCTTGCA TGGGGAGGACAGTGACGTTCTGCACCATTTTGTTTCTTCTATTGTCTTCTCCTTTTCATTTTCTTTCATTTTTGGATATA TTTTGAGTTGGCAGAGTCACGAGTGCGATTTACTGGTGGGCTGCGTTGCCGAATAAATATCCTTCTGCTCTTATCGACAT CTCATTGCCACATCATATATATTCTATAAATAATATATAAAAATACTAGTAACAATGTTAAAATCATTTTTACCATTTTT TATAGATAATTTGACCCTTTTTTATAATATTTTCTAATGCTTTTTTTTTTCTTTGACTTTTTGCAGGGATTTCAGCTTGT TCCATTGACTGTCAAGCTCATCTAGTAAAGGCTTTTGAGATCAGCATTTGGGAAGCATGGGAATATCTGGACTTTATTAT TAATAGAACAACAAAAAATTAGACTTCAACATTAGGCTTCTTCTTCAACTCCGTTACATTGGGATAAAAAAAAATCGTTA ATATTTCTGCTCCTCCCCCCGCTACAACTTTATTTGGATTATGAACAAAGTAGCTTCAAGTTTTTCATGTTTAATTTAAT AGATTTTGTTATTGGACAAATGCATTAGTTATTGCATCCGTTATGACTGAACAATTTTTTTGCTTTACATGCATAAATAA TGTGTATGGATATACTCTAGATTTTGATGAGTTCGTGATAAAATATTATGCTAGCTTTAGGGGGCTTCAAGAATCTTCTT TGTTGAAATAACAAAATTCTATTAATAATATTCATTAGGTTTTTTGGTCAAACTTAAACCGGTCTGATAATTTTTTTATA ATCAATTGAAAGTGTTATTTTGGGCAAAGTATAGAGAGGGTGTGAAATTTTTGGACAATAATTATTTATTCACACCTCAA AATGAGGTGGAATGAGGTGGAGGAAGAGAGAGATAGGAAGAAAAGAAAAAGTACGAGTGAGAAAGTATAAGATGTGATAG ATGATAAGAGGAGAGAGATAGAAATAAAAATAGTGGAAATGA
CDS sequence (LotjaGi5g1v0345700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACTTGCAACTCCACAGAAGAGG ACACAACTTGCCTTGGAAGCTTAAGCAGAAGACAAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGCCCTGAGCCCACAT GCGTCCACCATGACCCTTCAAGGGCTCTGGGCGACCTCACAGGGATCAAGAAGCATTACTCTCGCAAACATGGTGAGAAG AAGTGGAAGTGTGACAAGTGCTCCAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCTAAGACTTGTGGCACCAG GGAATACAGATGTGACTGTGGCACTCTCTTCTCCAGGAGAGACAGTTTCATCACCCACAGGGCCTTCTGTGATGCATTGG CACAAGAGAGTGCAAGACAACCTCCAAACCTGAGCAGTGCCATTGGCAGCCATCTATATGGGAGCAGCAGCAACAATATG GGGTTAGCCTTATCCCATGTGGGACCTCAATTGTCCAACATGCAACCATCAGACCTAAACAACAACAACCAGTCAGCTGA GCTCTTGCGGCTCGGTGGCGCGGCCGGTCGGACCGGAGTGCAATTTGACCAAATGTTCCAAACAAGCCTTGGCCCAGCCT CCTTCAGACCTACACAGCAAAGCGTGGCCTCCTTCTTCTTGCCTCATGAGTCGAACCAGAACTACCACCATGATCAGCAG CAACAACAACAAGGGTTGGTGCAGCAAAACAAGTCGTTTCAAGGGCTAATTCAATTGTCTGAACTCAACAACCACCACCA TCACAATCACAACAACAATTCTCCATCAGGTGGTGCCAACAACAACAGCCTCTTCAACCTTCCATTCCTTTCAAGCAACA ACAGCACCAACAGCAGCAACACCTCCTTCTCGGACCACTTCAATGAAAATGGTAGTGTCAACGACCAAGCCACCAATTTC TTCACCGGCAACGTGATGGGTGGCGGTGGCGGCGGCGGTAGTCATCAGCAGCACCACCAAACAACAGCAACAACCTCCGC TGCTCCTTCTCTGTTCAGCACATCCCTCCAAGCCAACAACAGTGCAATGGCTCACATGTCTGCAACTGCACTCCTTCAGA AAGCTGCTCAATTGGGTACAACTTCAAGCAACAGCACCGCTTCTCTGTTGAAAAGCTTTGGAAGCTCTTCCTCTAGCAGT GCACCCAAACCAATGGCTGGTGCTGCTGCAAACTATGGCGGCGTCGGCGTCGGTATGTTCAACGAGCAGAACAACCTGCA GGACTTGATGAACTCGTTTGCTGCGGCAAGTGGCAGCGGCGGCCATAACAATGTTTCCTCCATGTTTGAAACTGGGGGGT TTGAGGCTTATGATCGTGCAGGTGGTGTGAGTAGGGATCAGCAGAAGATGCAGGCGGCGATGAGCATTGGAGGGTCTGAT AGGCTGAGTACTCGTGATTTTCTTGGTGTTGGTCAGATTGTGAGAAGCATGAGTGGTGGTGGACAAAGAGAACAGCAACA TGCTTTTAATGCTTTGGAGGCAGAGAGAAATGCTGCTGCTGCTACAGCTGCGCCGTCAGGGCAATCTTTTGGAGGTGGTG GAGGGAATTTTCAGTGA
Protein sequence (LotjaGi5g1v0345700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEK KWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSSAIGSHLYGSSSNNM GLALSHVGPQLSNMQPSDLNNNNQSAELLRLGGAAGRTGVQFDQMFQTSLGPASFRPTQQSVASFFLPHESNQNYHHDQQ QQQQGLVQQNKSFQGLIQLSELNNHHHHNHNNNSPSGGANNNSLFNLPFLSSNNSTNSSNTSFSDHFNENGSVNDQATNF FTGNVMGGGGGGGSHQQHHQTTATTSAAPSLFSTSLQANNSAMAHMSATALLQKAAQLGTTSSNSTASLLKSFGSSSSSS APKPMAGAAANYGGVGVGMFNEQNNLQDLMNSFAAASGSGGHNNVSSMFETGGFEAYDRAGGVSRDQQKMQAAMSIGGSD RLSTRDFLGVGQIVRSMSGGGQREQQHAFNALEAERNAAAATAAPSGQSFGGGGGNFQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 511 | 511 | 1.8E-182 | – | |
| PANTHER | 1 | 511 | 511 | 1.8E-182 | – | |
| Gene3D | 2 | 29 | 28 | 3.3E-5 | – | |
| SUPERFAMILY | 5 | 102 | 98 | 1.02E-7 | ||
| ProSiteProfiles | 6 | 28 | 23 | 10.99 | ||
| Pfam | 6 | 28 | 23 | 2.7E-5 | ||
| SMART | 6 | 28 | 23 | 0.0052 | ||
| ProSitePatterns | 8 | 28 | 21 | - | ||
| Gene3D | 40 | 130 | 91 | 8.8E-7 | – | |
| SMART | 47 | 77 | 31 | 130.0 | ||
| SMART | 82 | 102 | 21 | 150.0 | ||
| MobiDBLite | 264 | 285 | 22 | - | – | |
| MobiDBLite | 269 | 285 | 17 | - | – | |
| MobiDBLite | 519 | 538 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi5g1v0345700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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