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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0347200 |
| Transcript ID | LotjaGi5g1v0347200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial pyruvate carrier; TAIR: AT5G20090.1 Uncharacterized protein family (UPF0041); Swiss-Prot: sp|Q949R9|MPC1_ARATH Mitochondrial pyruvate carrier 1; TrEMBL-Plants: tr|I3T207|I3T207_LOTJA Mitochondrial pyruvate carrier; Found in the gene: LotjaGi5g1v0347200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66338449..66340847) extracted from Lotus japonicus Gifu genome v1.2.
CTCGCAATAAGCATGCTTAATATTATTCTTCCAAAGCACTGTGAGACCAAGCTTTAGAGCTTGGATTTCAGTAGTGAGAG GATCTCCTCCCGTCGAACCCGCATAGAAAATTACTCCACCCATACCTATACAACACAAACTACTACTATATGCTCCACCC ACACCTCTCTAGAAAATTGCTTTATTTTTTATATTATTTAAAAAAAACAAAAAGGTAAGAAACGCGAGAGGTGATGTCGT TTTACTATCATTGGTCAACTCAATAAGGCTCCTCCCCACTCAGATTTGGTCTGTCATTCTCTTCCAAAATCAACGGCGGC GATTCTCCCTGCCACCACCAACCTCGCCCTCTCTGCCACCACTTTCACTTCAAGGTATCTCTCCGCTTCGTATATCCCTT TATATCATTCTTTCGCTCTGTAAATCTTCACCCAATTGATTGAAACCCTCTATGATTACCCTAAATTTCATTTGTTTGCA TTATTTTTCTTCATCCATAATCAATTGAATTGAATTAAGCCCTGAAGCTTTGTATTTTGTCAATTGCATTTAATTCTTTT ACTTTGGATGATAGGGTTCACAATTGTGGTATGAGAATGGAAGAAAAATAATATCATTTTTATGGATTTTTTGCATGCCC CCTAAGTTAGTTCTCACAATGGATGATTGCATCTCTAAGTGGGATAATTATGAGATGCAGTAAGATGTTATTCAATAGTC AGTACAGAAGGATTCGCGGTCTTTAGTCTTTTTTTATGATCAATTTTACTTTCTAGTGTTGCAATGCCACTATTTGGGTT TTTTCAATTGAACAATAATTTGCATTTACATGCTTGATATACTTGTAATATGATATTTTTGCTCTGTTGAATCATTTTAC AATTTTTGATGCCAATCAGAAGTAGCGCTGGTATCATATGGCTTCCTCCTTCCGAGCATTCTTGAACAGTCCAATTGGAC CTAAAACAACTCACTTTTGGGGACCTGTTGCCAACTGGGGATTCGTCGTAGCTGTGAGTTTTGCTCATATGAATTGTTGA TTTTATTTACTTGGCTAGTTATTCATTATTCATAATACGCAATGGTCCTAACCCTAGATTTCGTACTGATATGATGTGTC AAACTTTGTTATGTGAAGGGATTGGCTGACTTGAACAAACCTCCAGAAATGCTATCTGGCAACATGACATCAGGTTTAGC ACCCCTGCTCCCATGAAATGTTGATTCTTTTTTCTTGGTGTATGATGATCTGTGGCTTATTTCATCTCATGCTTGTTTTT CATGTTGCAGCAATGTGTGTCTATTCAGCCTTGTTCATGAGATTTGCATGGATGGTTCAGCCACGAAACTATCTACTTCT TGCGTGCCATGCCTCCAATGAGACAGTTCAACTCTATCATTTCACCCGTTGGGCAAAGTCACAGGGGTAAGCTGCTTTGA TTTTAACCAGTTCTACTTGCCGTGACTCCCTGGCCATTGAATGACAGTATTTTGATCTGTTGGGTTACAAAGGTTTCTCC AAGTTACAAGCCTTCTCAAGGCCTAGTTAAAACTGTGTAGTCTTCTATACTAAAATGGTAGACATATATTTGTTATGATC TATCATACGCTTGATTTATTTCGCTTCACCACTATCACTGTAGTTTACTGAGTTCCATCTCTATTTTCTCCTTACGCCTG CATTAGACATTTCTTTTGAATCAATGGAGCTATAGATGTCAGATTACTGATAAACGTTTGTATCTCTTTGCAATATTCTA TAGGTATCTCTCGGGGAAGAAGGAGGAAGCTTCACCTCAGTGACTTGAATCCTGATGCTTAAAACTTTCCTGAATGGGGA GTGCTTTGAATTGAATTTGTACTTGAACTTGTGAATTTATGAATAATTGATTGTAAGAAGGGTCTTATGGAAACTGTTAA AGATTGAGAATGTGCAAAGAGTATGACTGATCCAGAAGTATTTGTGAATCATGGCTTTGAAATTCAACTTAATTATACAG TTTATTTTGATTTATTTTGTTGTTTGTGTAGGGGGCGGGGTTGTTAAAAATTGGAGTGTTAGTATTTTAAACTATAATTT GAGCATAATGTTGACAAAATAAGAAGCATAAGGTGTGTTTGTTATTCTGTTTTAGGACCATCACCCATCAGTATGCATTT GTCATGAAGCAACAATTCGTTAACAAAACTGGGCTTGTTGCTTCTCACAAAACCAGGCCATAGATAGGATTGAATATATT GATCAAAGCCGAAGTGTATTCTTGAAGAATCACATTTTCATTGTCCCTACATTAAAATTTCAAAAAGATGATTTCGTGCT CATTTCTCACACAAACTGTTTGTTTAGTTTTTCCCTTTTAACTGAATTAAAATGTTATATTTCTTGTGTGGTATGTCTC
CDS sequence (LotjaGi5g1v0347200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTCCTTCCGAGCATTCTTGAACAGTCCAATTGGACCTAAAACAACTCACTTTTGGGGACCTGTTGCCAACTG GGGATTCGTCGTAGCTGGATTGGCTGACTTGAACAAACCTCCAGAAATGCTATCTGGCAACATGACATCAGCAATGTGTG TCTATTCAGCCTTGTTCATGAGATTTGCATGGATGGTTCAGCCACGAAACTATCTACTTCTTGCGTGCCATGCCTCCAAT GAGACAGTTCAACTCTATCATTTCACCCGTTGGGCAAAGTCACAGGGGTATCTCTCGGGGAAGAAGGAGGAAGCTTCACC TCAGTGA
Protein sequence (LotjaGi5g1v0347200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSFRAFLNSPIGPKTTHFWGPVANWGFVVAGLADLNKPPEMLSGNMTSAMCVYSALFMRFAWMVQPRNYLLLACHASN ETVQLYHFTRWAKSQGYLSGKKEEASPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 105 | 105 | 6.6E-66 | – | |
| PANTHER | 1 | 105 | 105 | 6.6E-66 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Pfam | 5 | 102 | 98 | 3.3E-36 | ||
| Phobius | 20 | 37 | 18 | - | – | |
| Phobius | 38 | 43 | 6 | - | – | |
| Phobius | 44 | 64 | 21 | - | – | |
| Phobius | 65 | 108 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mitochondrial inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. | ||
| Biological process | Mitochondrial pyruvate transmembrane transport | The process in which pyruvate is transported across a mitochondrial membrane, into or out of the mitochondrion. |
Expression pattern of LotjaGi5g1v0347200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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