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LotjaGi5g1v0349800.1

Overview

Field Value
Gene ID LotjaGi5g1v0349800
Transcript ID LotjaGi5g1v0349800.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G38520.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60; TrEMBL-Plants: tr|I1LF55|I1LF55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:66584622..66590387) extracted from Lotus japonicus Gifu genome v1.2.

CCCTTTTTTCTCGGCATCATGTCCATAAACTTGTCATTGTCCAAAATGACATTTTTCATTTCAAAGTTTCAATCTTTTTT CAATAATTCCAAGTTTTCTTCATCTGGGTGTGTGTCTATATAATAAAGCTTTTTCCTTTTTCCAATTTCATTCATTCATT GACTCTCTTTCTCTCTCTAACGTAGTTCCATTGAACCTTCTACCATTCTGGTTGTGGAGCCCATAGCTGGACCTGTGCTT TGCTGGCTTCAAGCTCTCAATCGTTGGTCTTTTTATGGTGTTTGTCTGCTGCTGAGTTCACAACAAAAGGGTTTCAATTT GCTCCAAACTTTTCATTTTTCATCTTCATCAATTTCATCATCATCTTCTGCATCATACATACCAAACCAAGTTGAGGAAC AGCCAAAGCCAAAAAAAGTAAAAAAGTAAGAAGAAAGAAGAAGAACAACCCCACTTGTGTTTTTTTCTGCTGATTTGATG GATCCATAGATCTAATGAATTTAGACCCTTTTTCTTTCAGGATCATTATCCTCTTCATCTGGAGCATCCCTATCAGTTGT CTAATTGTTGAGTAAGATCCTTTATTATGACTTTTACAATATGCTTTGTACTTGATGAGAAAGCTAGCTTATTGTTGTCA TTATTAGATTTTATTAGGAGGATTAGTCTAACTTGGGGTATTAATTTTCAATGTTAATGTGAACAAGGGATTTCCAATGA CTTGACTAAAAGGTATTTTTCTGAGAAAAAGTGGGGTTTGAACTTGGAAAAAAATATTGAAATTTGTTACTGTTGAATTG TCATCTTGTAGAAATTGGAAAGTTGGATTTTTCTTCAAAATTGCTATTGGAGAAGAGGATTTATATTTATTCCTGGTCAT AGTCTTTGTTATGATAACAAGAAACCAAGAAGTTTGATTTTTCTTCTAAACTGTTATTGGAGAAGCTGATTTCTAGTTGG TACCATTCATTCATTATAAAACTGTGATAAGCAGCTTGTTTCATATGTTTCTAGTTTGTACAAGGTTCAGGTTGTGTTTG AGGTTTAACCAGAACTGATTATTATTATCTGTACTTGTTTATTGGTATTGTTGCAGCTTGTGGTGACCGGTGAAGAGTGC AGAACTGTATCTGTAGTGAATTAAAATCCTGCGAGGGGTGTTGTTTCTGTGGTAGTTGATAGATGTGGAAATCCTTGGTG GCTTTTTGTTGAAATGAGGGATGTTATCACAGTTAATGAACCTATTGAGGGCGTGCTTTCGGCCAGGTTTGGATGGAAGA TATGCACGCTCAGGATCAGATGCTGGAGGTAAACAGGATGGACTATTGTGGTACAAGGACTCGGGGCAGCACTTGAATGG CGAATTTTCAATGGCTGTTGTTCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCAGGCAGTTTGTGCTCCC ATGAGTCCGGCCCGTGTGGAACTTTTGTCGGTGTCTATGACGGGCATGGAGGGCCGGAGACATCGCGGTTTATCAATAAT CACCTATTTCAACATCTCAAGAGTAAGTTGACAATATAATGAGTGAATTCTTCTAGCTTTTTTGTATTGGCATAGTGCAT GTTTGGAAACTCTTCCATAAGCTCGAATCAATTCTAGGGAGAAACTTATGTGAGTAGCTTTTGGGTTCCAGGATTTATTC TTTCGGTGCCACTCTGCCAGTAGTGGTTGGTAGGTTGCAGTGAAAGTTTCAGATAGACACTGAGCTGAGTCTCAGAAAAT TGTGGATTTCAATACCTGTTTAGTTGCATGTCTATCAGTTGTGTATTTATTTGTGTTTTGACTCATTGCTTTCCTCATGA TTATCAAATATCAATTAAACAAATTCTTTCTCTATTTTAAATTTCAGGATTTACTTCAGAGCAACAATCAATGTCAGTGG ATGTTATTCGCAAGGCATTCCAAGCAACTGAAGATGGGTTTATGTCAGTGGTTGCTAAACAGTGGCCATTGGCACCACAA ATTGCAGCTGTAGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACTCTTTTTATAGCAAATGCTGGAGATTCCAG GGCTGTTTTGGGAAGAGTTGTCAAGGCAACCGGTGAGGTTTTGGCCACACAATTATCGACAGAGCACAATGCATCAATAG AGTCTGTAAGACAGGAACTGCATTCTTTGCACCCTGACGATTCAAATATCGTTGTTCTAAAGCATAATGTATGGCGTGTG AAGGGCATTATTCAAGTAAGTCACTCTTAGCTCATAATGTTACTTCACTTGCTGCTTGAGCCAGTATTTTTATTTTCTAG CTGCTACATGTACACGTAGTAGATAACATCACGAAAGTCACTTCATTCTGAAACTCAAATCACTCAACACTTTATATCAT TTTAAATTTGTAACAATCCTGTGCAGGAAGCAAACATTCAGTTTCAGGATGTAATAAGTTTTCAGGATAAACTTTAAGTT ACTAATGCTTTTGTATCTTTCTTTTCTTTCATGAAAACTTGGACATTCAGCTTGTCATATCTAATTCTTATTGCTTTCTG ATAATCCTTGTACTTTTCATCACTGATTTTATTAGATTTAGATACCTCAACTGGCTTAATTCAAATGCTTATTATTGTAA CACCAAACAAAACTTGACTTGGACCTTCCTCTCTCTCTCTCTCTCTTAATTGAAATACATCAAAAATTTAGAAAATCTTT GTTGCAGATTTCTAGATCTATTGGTGATGTGTATTTGAAAAAGGCTGAGTTCAACAGAGAACCATTATATGCTAAGTTTC GTCTTCGTGAGCCGTTTAAGAGGCCAATTCTGAGCTCAGAACCATCAATTACAGTGCATCAGTTGCAGCCACATGACCAA TTTATTATATTCGCGTCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCG TAGTGTAAGATACCTATTTAAATTCAACTTTACCTGATAGTGTTATACCATTACTATATTACTAGTAAGTTTTAAAATGA GTTCATTAATTGCTCTTTTAGTCTGAAAACTTTTGTGGGTTTTTTGAGTTTCTGTTATTCCTGAGAACTTTGCATGTAGC TGACACTGCCATGCCATTGTTTCTTAGATCTCTGAATTATTCTTTTCGTTTTGATTTATTTGCAAGTATCTGTCAAGCTT GAATGGTGCTTGTGTACATAATTTGTAGCGGGGATTTTGTATGCGCTAGTAACATACATTGCAGCCCATATATCCATAGA GATGAGATTGAATATATGTAATATTCAGTGAGGTGAGGGAACATGCATCTTCACCATGAGAAGCTGCCAGTCTCTGAGCC TGTTTGGATACGGACCTATTGGAGCTTATCTACTAGAAAAAACACTAGATAAGCTCCAATAAGTGCTCTTTGGTTTGTAT CCACTCGACTACACGGGTTCTTCAAGTCATAAGAATTGAAAGTTAGTGGTCTTTTAGTTTTAGTTGTTCATAAGCTTAAT GGTTTACACATGCATCGTTTGAGCGTGTTACATTTATGCTAACAGACATTTTAGCAAACTAGGTGTTTTTTTTCCATGGG GTCAATTGCAACTTGAATTTATCAGAAGTAGTGGATTCAGTAGAAATATTTGAGTTGGTGACATAGAGAAGTTAGTAAAA CTTCGAAAGTAATTCTGGACAAGAAAACAAAAAAAAAAAATTATACAGTTGAGCACAGATTGTTTTTCCATTTAAAAAAT GTAATCTTATGATTTATATCATTCAGTTGTTGCATAATCTTATTCTTTGAAACCCTAACAAAAAAGTTGTCTGATAATTT TGCACACAGAAATTCATTATGTTCATAAAGCCTTCCTCTGCCTTGGATAACTCTTGAAACAAAAAATTGTATTCTTAACT TGGATAACTCTGGTTTTCATCAAACGTGATTTTGGAAATTGGGCTTAAGCTGTAGCAAATCTGTTGGATAATCTTTGATA AAGGAAGGGTGATTTAGTAAAAAATTATGCATAATGTCCTTAAATTGCTTTACTGCTTGAACATATACAATATGTGAGGT ACTTATGAAATGCTGGCAGAAAATTAGTCCAAAGTGTATTCATGTTTTATTATCTATCCTTCTTTCAGGGAAGTGCAAGG AGGCTGGTGAAAACTGCACTTCAAGAGGCAGCAAAGAAGAGAGAAATGAGATATTCCGATTTAAGGAGAATTGACAGGGG AGTTCGTCGTCATTTCCATGATGATATCACTGTGATTGTTGTGTATCTTGATTCAAATCTCATGAGTAGGGCAAGCACTG TGAAGTTCCCTAGTGTTTCTATTAGAGGTGGTGGTATTAGCCTGCCTCATAACACACTTGCACCTATTGGTGGTACCTGA TCATCTAAGTTGTATCTTAACTTTTTTTCCTTTTTTTGTGTCATTTTCATGTGTGAATATCAGTTTATCTTCAAATAGCA ATGAGAGAAACAGCACTTCAATTCTTTTGAATGTGAACTGTAGTAACTCACTAGATAACATACTAATACTCTTGTTTAGT CTCATTCCCTCAAACCAAAAGAGCAGAAAGGGTTGTTCTGATGACACCATTATTTTTAAGAGTTACCTCGGTTTTATCTA GCAAATCTTATGTACTACTAGTACTACCTACGACTAAAGACTCAACGCTCCATCCCTCAGCTATAGACATTTATTTTCAA TTTATATATATTTTTTAAAATATTTAAAAGAGAATAGTTGACCATAAAAGGATAGGTGATAACACTTTAGATGGTGTAAT ACTTACTACTGTAGCACTGAACAAAGTAGAATTTAAGGACCCTAAAGTTTTTTATATTTTTTATAGGTAAATGTTAGTTG TTAGTAATGTTAGTAAATTAGTCATCCTCAAGGTTTGACCCCTGGACCTTTCACCATTCATCCAACCCAACCCTTATCAT GTCCCTAGCTCTTATCACTTGAGCTAACCCTCGAAAACTGTAAAGTAGGTTTTGGCTATTAGGAAGTAGGAACCTTTCTC GATGCAAGTGATAAGGTATGTGCCTAAAGTTGATTAGTTTTGATCCTTGAACAAAGGCTAGTCCTTATTATGGGGAATTG TTCTCTTTAGTTTGTCCGAAAGCTTGTGTTTGTTTTATCAAGAAAAGAAATATAGTAGTTGTAACTTTTTGTTGTTGTGT TCAAGGGAAGATAATTCACGGCTATGTATGTTGAACCTTGAGAGAAGTCAATGAGAAACTCCATAAAGGGAAAAGAAAAA AAGAACAAAATATCAGATAATGTTTGAATTTGTACACTTTTGTCATGTGTTTCCCAGCTCAATTAATTAAAGTTAGCCAA GAACGACACATTTTTACTAGGTAAGTATACATTGCTTCTTAGATACCACGTAGCACGTACGACATGTCTAATGTCTTGTA GTACATTATGAATTGAATTTGCGTATGTAAAACATGAAACTGGTGCATTAAAGCTTATAGAATTGAAGGCTGAAGCTTCT ATCTTATCGTGCTTTGAATTTTGCGTTCATTTTTTTTATAAACACACTATTAATCCCCACAAATAGTTTACATGAATCAA TGGATAGACATCCATTTAATATTTCCCCATATACATCTCCCGTTTTGCGAATAATTACTCTATTCATTCATCATAGCCTC ATAGGTGATTTTTGCAAATACTCAATAGCTCTATATGACTATATCCAACCATCATCCCTAAAGAAAAATGGAAAATGAAG TGAAAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0349800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTATCACAGTTAATGAACCTATTGAGGGCGTGCTTTCGGCCAGGTTTGGATGGAAGATATGCACGCTCAGGATCAGA TGCTGGAGGTAAACAGGATGGACTATTGTGGTACAAGGACTCGGGGCAGCACTTGAATGGCGAATTTTCAATGGCTGTTG TTCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCAGGCAGTTTGTGCTCCCATGAGTCCGGCCCGTGTGGA ACTTTTGTCGGTGTCTATGACGGGCATGGAGGGCCGGAGACATCGCGGTTTATCAATAATCACCTATTTCAACATCTCAA GAGATTTACTTCAGAGCAACAATCAATGTCAGTGGATGTTATTCGCAAGGCATTCCAAGCAACTGAAGATGGGTTTATGT CAGTGGTTGCTAAACAGTGGCCATTGGCACCACAAATTGCAGCTGTAGGGTCATGCTGTCTTGTTGGTGTTATTTGTAAT GGAACTCTTTTTATAGCAAATGCTGGAGATTCCAGGGCTGTTTTGGGAAGAGTTGTCAAGGCAACCGGTGAGGTTTTGGC CACACAATTATCGACAGAGCACAATGCATCAATAGAGTCTGTAAGACAGGAACTGCATTCTTTGCACCCTGACGATTCAA ATATCGTTGTTCTAAAGCATAATGTATGGCGTGTGAAGGGCATTATTCAAATTTCTAGATCTATTGGTGATGTGTATTTG AAAAAGGCTGAGTTCAACAGAGAACCATTATATGCTAAGTTTCGTCTTCGTGAGCCGTTTAAGAGGCCAATTCTGAGCTC AGAACCATCAATTACAGTGCATCAGTTGCAGCCACATGACCAATTTATTATATTCGCGTCTGATGGGCTCTGGGAGCACC TTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCGTAGTGGAAGTGCAAGGAGGCTGGTGAAAACTGCACTT CAAGAGGCAGCAAAGAAGAGAGAAATGAGATATTCCGATTTAAGGAGAATTGACAGGGGAGTTCGTCGTCATTTCCATGA TGATATCACTGTGATTGTTGTGTATCTTGATTCAAATCTCATGAGTAGGGCAAGCACTGTGAAGTTCCCTAGTGTTTCTA TTAGAGGTGGTGGTATTAGCCTGCCTCATAACACACTTGCACCTATTGGTGGTACCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0349800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSQLMNLLRACFRPGLDGRYARSGSDAGGKQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGSLCSHESGPCG TFVGVYDGHGGPETSRFINNHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGFMSVVAKQWPLAPQIAAVGSCCLVGVICN GTLFIANAGDSRAVLGRVVKATGEVLATQLSTEHNASIESVRQELHSLHPDDSNIVVLKHNVWRVKGIIQISRSIGDVYL KKAEFNREPLYAKFRLREPFKRPILSSEPSITVHQLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKTAL QEAAKKREMRYSDLRRIDRGVRRHFHDDITVIVVYLDSNLMSRASTVKFPSVSIRGGGISLPHNTLAPIGGT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF593
17 382 366 7.6E-188 –
PANTHER
PTHR13832
17 382 366 7.6E-188
IPR015655
Gene3D
G3DSA:3.60.40.10
37 366 330 1.1E-84
IPR036457
SMART
SM00332
40 354 315 6.7E-85
IPR001932
ProSiteProfiles
PS51746
48 356 309 43.034
IPR001932
CDD
cd00143
49 356 308 4.80609E-68
IPR001932
SUPERFAMILY
SSF81606
57 357 301 4.97E-57
IPR036457
Pfam
PF00481
77 326 250 1.2E-41
IPR001932
ProSitePatterns
PS01032
82 90 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0349800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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