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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0351700 |
| Transcript ID | LotjaGi5g1v0351700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR protein; TAIR: AT2G17020.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9SDA8|FBL10_ARATH F-box/LRR-repeat protein 10; TrEMBL-Plants: tr|A0A1J7HJC3|A0A1J7HJC3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0351700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66763447..66768750) extracted from Lotus japonicus Gifu genome v1.2.
TTTCCTCTCATTTCCCCTCATCCCCCTTTCCCTCTTGCATCAAAAACAAAACCACATGTGATTACATTACCATTTACCAA CAACTCCTCTTCATCATTTTACTCAAAGCCTTCTTCTTCTCTCAACAAAATGTAAGATCAAGTTTTGATCTAGTAGTACA ACTCTATGTTTTGATGATTACAAGTTAACCTTTTGATATGAACAATTGTGGTACTCTAACGTGTTTTTCTGAGTGTGCTA TTTACAGGCTCTGACCCTGACTCAATTTCACACAAATCAGAAGCACTGTGTATAAAGGGTAACCCAAGCAACGCTTTCGC ATTCACCATGTTCAGTATGAACAGTGGAAAAGCTTCAGAAGATCTGAAGCTATACAAACTCTGATGAGGACTCAGTCGCT AGAAGCTCTGATGATCCAGAAGTTCTGACAACCAAGAAACACTGAAGGTTCAGATGTTCCGATGGTGTAGAAGACTCTGA AGATCCAGAAGCTGAATAGTGGAAACTCTGAAGTCCAGAAGCAAGAAACTCTGAAGGCCATGTTCTTCCCTCTGAGTTCA GAATCAGAAGATACAATGGTCAGAGGATCTGTGCTATCCCTCTGACTCTGATCAACCGGCTTCACAAGTTCCAATACGAA GCATTCCTCTGATCAGAAGTCTCCTAGGTTAAAAGGTCAAGTCGCTATCCAAGTACAAAAGCAAGTGTACCTTCCTGACG ACCTACCTAACGTTCTCAGCCACAGCAGAAGCTGGATTTTCCAGAACTGCCCTCCAACGGTAGCATTTCCCATGCAACGC TCAACCCTAATCCTTGGAGTATATATAGAGGCTGAAGATTGAAAGAAGCGGCTAGAAAAAAAGAAGAAAAAAATATACAA GAAGCAATACACACGCGCAAGATATATTCTAAGCTTTCTTTCATCTTGTAATTTATTTTAGTTTACACTCAGCTTATTCA GAAGCAAACCCTTGTAAACACCAACCTCAAACAGTTGTTTGATTTTCCTTTAGGAGATCAAGGTTGATCGGATCCTAGAG AAGACTAAGAGAGTGAATCTTAGTGTGAGCTAAGTCAGTGTAATTGTTAGTCACTTGTAGGTTTCAAGTGCAGTTGTAAC TCTTACCTGATTAGTGGATTGCCTTCATTCTAAGAAGGAAGAAATCACCTTAACGGGTGGACTGGAGTAGCTTGAGTGAT TTATCAAGTGAACCAGGATAAAATCCTTGTGTGCTTTTCTATCTCTATCTTTTGCACTTAGTTCTCGAAAAGATTTGTTA AAATCTTTAAGGTGGTAGTTTTGTACTGAAAACGTTATTCAAACCCCCCCTTTCTACCGTTTTTCATACCTTCACAAAAG ACATGCCCGATCCAGAGAGCTCAGAAGCAGGAACCATGGAGGTGAATCTGGAACACCTCCCTTACGCTCTCCTCGCCACC ATCATGACCAAGCTCGACATCGCTTCCATCTGTTCCTTAGCCTCCACCTCCTCCACCTTCCGCTCCTGCGCCAATCAAAT CCTCTCTTTCCTCCCCAATTTCCACCTCGTCGTACGTATCATACCCATCATTCCCTTTCACCACCCCACTTCCTCTATTT GTCAAAGTTCGTTTTTTTTTCGATTTTCCGATCTGGGTTTCTTCGGAAATCCCCAATCTAACAACGCTTGTTTGTTTTTC AGGACATTGCGCCTTCTGGGGGTCTGCTGAGACCGTTGCTGCCACCGAACCCTTACCTTCAGAGCCTCAAGGTTGATTGC GGTCGCCTTGATGATTCTGCAATAGCCCTCTTGGTCAAACCCTCCTTGCATGAGCTTTGCCTGCACAACTGTGCCGATTT CAGTGGGAAACTGCTCTCTGAGATTGGAACCAGATGCAAGGATCTAAGGTTTGTGATAATCCATTTCATCTTTCTGGTGG TAATTGTGGTTGATGATATGATTTAGCACTTGTAATGCATGTTTGGGATGGACTAGTCCACTTAGCATGGTGTAGTTTAG CAGTTTTTAGTGCAGTTGTTATTGGTTGGCTGTTTATTCCCATCAGGTCTCTCTACTTGGGCTCGGTAGCAGAAAAAAGA GGGAGGGCAATTCATATTTCTGATCTGGAGGAGTTACTCAGCGGATGCTCCCAATTGGAAGTAAGCCATAGCTATTAAAA TTAAAAGCTTCAAGATATAATTAAAGTAACAGATTTCAAGATTCTCTAGATTATACATTCTTATGGTCTTGAACAATGGG ATGGAAAAAAATATCAAACAAAAGATTGGTTTTTCATCGTTACATAGATCTTGGTGATTTATCAACATTTATGAGCCCTT CTTGCTTGCTATGGTAAAAAGCTCTTTGCTAAGATGTTAGGTCTTACTCTCTTTGGTAAATCATGTTGACTATGCATTGG TCTCATTTTGTTTCTTTGATCATTGGATTTTCTACTAACATTTGATCCCATTTGGACCTTTACTGATCTCTAAAAGTTTA CTTGATTGTAAATATCTGCATAAAAAATCAGGAGAAATGTTAAGACTTGGGAAATTTTGTATGTGTTTTCACTGTTGATA CCAAACTAAAGACTGAATTGACCAATTTTGTCATTACAGCTTATTGATGTAGTAATGTGCTCGTTTGGATGTGGACTAAA GAGCATTTATAAGAGCTTATCTACTAGAAGAAACACTAGATAAGCTCCAATAAGTGTTCTCTGGTCCGCATCCAAACAGG CTCAAAAGTCTCCTCATGGTCTTCTTCCTTGAAATGTTTGTTTTTATGTTTTTACCCCCGATTTTAAAATATGATGACAT GCTGACTGATGATTATTGATGCCATTAGATCTAATACACATGATGGTTATTTTGGTAGGCATTGAATCTGATGTTTGACG TCTCTCTCTTTCTACGTCATAACTTTGCTCGAGTTTGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTAC ATTTCTTCAGTTACTGTGACTGAACTGCTTAGCCCCAATTTGGGATCCCATCAGTCCTTAAGTCCTGTTCAACCATCCGT ACTTCCAGGCATTCAGAAACTATGCCTTTCAGTGGACTATATAACTGATGCTATGGTTAGTACAATATCTAAAGGTCTTG TCTTTTTGACCCATTTGGATCTTCGGGATGCACCACTGATTGAACCAAGAATTACATTTGACCTAACGAACGCTGGCCTT CAACAAATTAATCCCCATGGAAGGCTGAACTATCTTTCGCTGATACGAAGCCAAGAGTTCCTCATTACCTATTTCCGAAG AGTAAACGATCTGGGATTACTTCTAATGGCTGACAAGTGTGCAAACTTGGAGAGCATATGTCTCGGCGGCTTTTGTCGTG TTACAGACACCGGTTTCAAAACTATCCTGCATTCTTGCTCCTGCCTACTCAAGCTGAAGGTCACTCATGGGACTCAGTTA ACTGACCTAGTTTTTCATGATATCTCTGCAACATCTCTTACTTTACTACACGTGAGCTTAAGATGGTGCAATCTGTTAAC AAACCATGCAGTTTTGAGGTTGGTATCAAATGTGGAGCTTAAAATTCTCGACTTGAGATATTGCAGGAGCCTTGGGGATG ATGCTCTCCAGGCCATTGGCACACTTACAAAACTGAAAGTTTTACTATTAGATGGCTCTGATATAACTGATGCTGGACTT TCATGCTTACGGCCATCTGTTATTAATTCACTATATGCGTTATCTCTTCGAGGGTGCAAGAGGCTTACCGATAAATGCAT TGCAGTTCTATTTCATGGTTGTGGCATGCTGGAATTGAGAGAACTGGATCTTTCTAATCTTCCTAACCTCTCGGATAACG GAGTTCTGATGCTGGCAAAAAGTAGGATTCTCCTTTTTGAACTCCGAATGCGACAGTGCCCTCTAATCGGTGACACTTCA GTCATGGCATTAGCTTCAATGTTGGTTAATGAGGCAAGATGGCATGGAAGCAGTTTACGTGTGTTGGATCTTTACAACTG CGGTGGCATTACACAGCTTTCATTCCGCTGGCTAAAGAAACCATATTTTCCAAGGCTGAAATGGTTGGGAGTGACTGGAA GTGTTAACAGAGACATGGTAGATGCTTTAGCTAGAAGTAGGCCCTTCTTGCATGTGGCATGCCATGGTGAGGAGCTCGGG GCTGATCCGTATGATATCTCAGATGGCTTATATACACATGATTATGATGAGGTGGATGAATTTGAGCAGTGGCTGCTTGA AGCTGATATTGATACTGACGATGAAGAAATGGTTGATGCTGAAAACAATGAAGAACTGGTTATCTAATTTGCTTTAAAGC AAATGTCTAATTTGCTGGCACATGGCTTAGCATGTTAGACTTTTGTGTGATCTGTTGTATGCATTTGATTTGGACAAGTC GTGTTAACTTCTTATAATTCTTTGTTGATTGGAACTTGGTAAAACTTTTTTGTTAATATTTGTTGTTTGGAACTTGTGCC CAAACCATTCAATGGATTTGAAGTATTGGCTGTAAGCATGACATGATGCAAGTCTCATTGCTGTGTGTCAAAGACCTTAA CTTCTGTTGTTAGAACATTTTTTGGGACAAAAGATTGTTCAAAATCCTGTTCTGCTGTCCACTAGTTTTGTTTTTTGTGT AGACATTGAGTGATGAGTTGGGGAAGGGAGTGGGATGTTTTTTTTTTGGCTAAAAAGCATTTTTGGCCCCTGATGTTTCA AGTTTGTGCAAATTCTGCCATTATTCTATTTTTGTCGACGTTTCTACCCCTCATGTTTTCAAACAGTGCACCCTCTACCC CTCCGTCAGTTAGGCTTTCTCAAGAGAGGTTCCTTAGTGGATTGGAGAGATGAAGAGGAGTATATGAAGTTGATGATGAT CAAGGAAATGATATAAATTAAATTTGCTTGATGTGTATATCAATTATGTATGTAACTGAACTGGTTAAATGCATGTTTTG CTACTTACAGGTCCTGAGTTTGAATCTCTCATGCCCCCTTTTTCCAATTTCACTTGTAATATCCACGTGGTATGTCTAGA AAATATTAAAAAAAAAAGTCAAATCAGCTCATACCGTTAGTTTGTTAACGTCTGACTAACGGAGGGGTAGACGGTGCACT GTTTGAAAACATGAGGGGTAGAAACATCGATAAAAATAGAGTAGGGACAGAATTTGCATAAACTTAAAATATCAGGGGTC AAAAGTGATTTTTAGCCTTTTTTTTTTTTTTTTTACTTTGAACACCGCATGGAGTTATGTTCTCCTATCTTTATCACTTA GTGTATGTGTTTAAATACAGTTGA
CDS sequence (LotjaGi5g1v0351700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCGATCCAGAGAGCTCAGAAGCAGGAACCATGGAGGTGAATCTGGAACACCTCCCTTACGCTCTCCTCGCCACCAT CATGACCAAGCTCGACATCGCTTCCATCTGTTCCTTAGCCTCCACCTCCTCCACCTTCCGCTCCTGCGCCAATCAAATCC TCTCTTTCCTCCCCAATTTCCACCTCGTCGACATTGCGCCTTCTGGGGGTCTGCTGAGACCGTTGCTGCCACCGAACCCT TACCTTCAGAGCCTCAAGGTTGATTGCGGTCGCCTTGATGATTCTGCAATAGCCCTCTTGGTCAAACCCTCCTTGCATGA GCTTTGCCTGCACAACTGTGCCGATTTCAGTGGGAAACTGCTCTCTGAGATTGGAACCAGATGCAAGGATCTAAGGTCTC TCTACTTGGGCTCGGTAGCAGAAAAAAGAGGGAGGGCAATTCATATTTCTGATCTGGAGGAGTTACTCAGCGGATGCTCC CAATTGGAAGCATTGAATCTGATGTTTGACGTCTCTCTCTTTCTACGTCATAACTTTGCTCGAGTTTGGGCTTCTGCCTC AGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACTGTGACTGAACTGCTTAGCCCCAATTTGGGATCCC ATCAGTCCTTAAGTCCTGTTCAACCATCCGTACTTCCAGGCATTCAGAAACTATGCCTTTCAGTGGACTATATAACTGAT GCTATGGTTAGTACAATATCTAAAGGTCTTGTCTTTTTGACCCATTTGGATCTTCGGGATGCACCACTGATTGAACCAAG AATTACATTTGACCTAACGAACGCTGGCCTTCAACAAATTAATCCCCATGGAAGGCTGAACTATCTTTCGCTGATACGAA GCCAAGAGTTCCTCATTACCTATTTCCGAAGAGTAAACGATCTGGGATTACTTCTAATGGCTGACAAGTGTGCAAACTTG GAGAGCATATGTCTCGGCGGCTTTTGTCGTGTTACAGACACCGGTTTCAAAACTATCCTGCATTCTTGCTCCTGCCTACT CAAGCTGAAGGTCACTCATGGGACTCAGTTAACTGACCTAGTTTTTCATGATATCTCTGCAACATCTCTTACTTTACTAC ACGTGAGCTTAAGATGGTGCAATCTGTTAACAAACCATGCAGTTTTGAGGTTGGTATCAAATGTGGAGCTTAAAATTCTC GACTTGAGATATTGCAGGAGCCTTGGGGATGATGCTCTCCAGGCCATTGGCACACTTACAAAACTGAAAGTTTTACTATT AGATGGCTCTGATATAACTGATGCTGGACTTTCATGCTTACGGCCATCTGTTATTAATTCACTATATGCGTTATCTCTTC GAGGGTGCAAGAGGCTTACCGATAAATGCATTGCAGTTCTATTTCATGGTTGTGGCATGCTGGAATTGAGAGAACTGGAT CTTTCTAATCTTCCTAACCTCTCGGATAACGGAGTTCTGATGCTGGCAAAAAGTAGGATTCTCCTTTTTGAACTCCGAAT GCGACAGTGCCCTCTAATCGGTGACACTTCAGTCATGGCATTAGCTTCAATGTTGGTTAATGAGGCAAGATGGCATGGAA GCAGTTTACGTGTGTTGGATCTTTACAACTGCGGTGGCATTACACAGCTTTCATTCCGCTGGCTAAAGAAACCATATTTT CCAAGGCTGAAATGGTTGGGAGTGACTGGAAGTGTTAACAGAGACATGGTAGATGCTTTAGCTAGAAGTAGGCCCTTCTT GCATGTGGCATGCCATGGTGAGGAGCTCGGGGCTGATCCGTATGATATCTCAGATGGCTTATATACACATGATTATGATG AGGTGGATGAATTTGAGCAGTGGCTGCTTGAAGCTGATATTGATACTGACGATGAAGAAATGGTTGATGCTGAAAACAAT GAAGAACTGGTTATCTAA
Protein sequence (LotjaGi5g1v0351700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPDPESSEAGTMEVNLEHLPYALLATIMTKLDIASICSLASTSSTFRSCANQILSFLPNFHLVDIAPSGGLLRPLLPPNP YLQSLKVDCGRLDDSAIALLVKPSLHELCLHNCADFSGKLLSEIGTRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCS QLEALNLMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHQSLSPVQPSVLPGIQKLCLSVDYITD AMVSTISKGLVFLTHLDLRDAPLIEPRITFDLTNAGLQQINPHGRLNYLSLIRSQEFLITYFRRVNDLGLLLMADKCANL ESICLGGFCRVTDTGFKTILHSCSCLLKLKVTHGTQLTDLVFHDISATSLTLLHVSLRWCNLLTNHAVLRLVSNVELKIL DLRYCRSLGDDALQAIGTLTKLKVLLLDGSDITDAGLSCLRPSVINSLYALSLRGCKRLTDKCIAVLFHGCGMLELRELD LSNLPNLSDNGVLMLAKSRILLFELRMRQCPLIGDTSVMALASMLVNEARWHGSSLRVLDLYNCGGITQLSFRWLKKPYF PRLKWLGVTGSVNRDMVDALARSRPFLHVACHGEELGADPYDISDGLYTHDYDEVDEFEQWLLEADIDTDDEEMVDAENN EELVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 611 | 599 | 1.1E-271 | – | |
| PANTHER | 13 | 611 | 599 | 1.1E-271 | – | |
| SUPERFAMILY | 14 | 52 | 39 | 8.37E-6 | ||
| Pfam | 16 | 53 | 38 | 4.0E-5 | ||
| SUPERFAMILY | 59 | 264 | 206 | 1.96E-10 | – | |
| Gene3D | 67 | 419 | 353 | 1.3E-35 | ||
| SMART | 102 | 127 | 26 | 520.0 | ||
| SUPERFAMILY | 304 | 570 | 267 | 7.85E-24 | – | |
| SMART | 317 | 342 | 26 | 7.6 | ||
| SMART | 369 | 394 | 26 | 10.0 | ||
| SMART | 396 | 419 | 24 | 13.0 | ||
| Pfam | 397 | 416 | 20 | 0.48 | ||
| Gene3D | 420 | 500 | 81 | 1.0E-11 | ||
| SMART | 445 | 470 | 26 | 250.0 | ||
| SMART | 473 | 498 | 26 | 0.0035 | ||
| SMART | 499 | 524 | 26 | 38.0 | ||
| Gene3D | 501 | 590 | 90 | 1.6E-5 | ||
| SMART | 533 | 558 | 26 | 350.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0351700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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