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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0351700 |
| Transcript ID | LotjaGi5g1v0351700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR protein; TAIR: AT2G17020.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9SDA8|FBL10_ARATH F-box/LRR-repeat protein 10; TrEMBL-Plants: tr|A0A1J7HJC3|A0A1J7HJC3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0351700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66764444..66767367) extracted from Lotus japonicus Gifu genome v1.2.
GAAGCAGGAACCATGGAGGTGAATCTGGAACACCTCCCTTACGCTCTCCTCGCCACCATCATGACCAAGCTCGACATCGC TTCCATCTGTTCCTTAGCCTCCACCTCCTCCACCTTCCGCTCCTGCGCCAATCAAATCCTCTCTTTCCTCCCCAATTTCC ACCTCGTCGTACGTATCATACCCATCATTCCCTTTCACCACCCCACTTCCTCTATTTGTCAAAGTTCGTTTTTTTTTCGA TTTTCCGATCTGGGTTTCTTCGGAAATCCCCAATCTAACAACGCTTGTTTGTTTTTCAGGACATTGCGCCTTCTGGGGGT CTGCTGAGACCGTTGCTGCCACCGAACCCTTACCTTCAGAGCCTCAAGGTTGATTGCGGTCGCCTTGATGATTCTGCAAT AGCCCTCTTGGTCAAACCCTCCTTGCATGAGCTTTGCCTGCACAACTGTGCCGATTTCAGTGGGAAACTGCTCTCTGAGA TTGGAACCAGATGCAAGGATCTAAGGTTTGTGATAATCCATTTCATCTTTCTGGTGGTAATTGTGGTTGATGATATGATT TAGCACTTGTAATGCATGTTTGGGATGGACTAGTCCACTTAGCATGGTGTAGTTTAGCAGTTTTTAGTGCAGTTGTTATT GGTTGGCTGTTTATTCCCATCAGGTCTCTCTACTTGGGCTCGGTAGCAGAAAAAAGAGGGAGGGCAATTCATATTTCTGA TCTGGAGGAGTTACTCAGCGGATGCTCCCAATTGGAAGTAAGCCATAGCTATTAAAATTAAAAGCTTCAAGATATAATTA AAGTAACAGATTTCAAGATTCTCTAGATTATACATTCTTATGGTCTTGAACAATGGGATGGAAAAAAATATCAAACAAAA GATTGGTTTTTCATCGTTACATAGATCTTGGTGATTTATCAACATTTATGAGCCCTTCTTGCTTGCTATGGTAAAAAGCT CTTTGCTAAGATGTTAGGTCTTACTCTCTTTGGTAAATCATGTTGACTATGCATTGGTCTCATTTTGTTTCTTTGATCAT TGGATTTTCTACTAACATTTGATCCCATTTGGACCTTTACTGATCTCTAAAAGTTTACTTGATTGTAAATATCTGCATAA AAAATCAGGAGAAATGTTAAGACTTGGGAAATTTTGTATGTGTTTTCACTGTTGATACCAAACTAAAGACTGAATTGACC AATTTTGTCATTACAGCTTATTGATGTAGTAATGTGCTCGTTTGGATGTGGACTAAAGAGCATTTATAAGAGCTTATCTA CTAGAAGAAACACTAGATAAGCTCCAATAAGTGTTCTCTGGTCCGCATCCAAACAGGCTCAAAAGTCTCCTCATGGTCTT CTTCCTTGAAATGTTTGTTTTTATGTTTTTACCCCCGATTTTAAAATATGATGACATGCTGACTGATGATTATTGATGCC ATTAGATCTAATACACATGATGGTTATTTTGGTAGGCATTGAATCTGATGTTTGACGTCTCTCTCTTTCTACGTCATAAC TTTGCTCGAGTTTGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACTGTGACTGA ACTGCTTAGCCCCAATTTGGGATCCCATCAGTCCTTAAGTCCTGTTCAACCATCCGTACTTCCAGGCATTCAGAAACTAT GCCTTTCAGTGGACTATATAACTGATGCTATGGTTAGTACAATATCTAAAGGTCTTGTCTTTTTGACCCATTTGGATCTT CGGGATGCACCACTGATTGAACCAAGAATTACATTTGACCTAACGAACGCTGGCCTTCAACAAATTAATCCCCATGGAAG GCTGAACTATCTTTCGCTGATACGAAGCCAAGAGTTCCTCATTACCTATTTCCGAAGAGTAAACGATCTGGGATTACTTC TAATGGCTGACAAGTGTGCAAACTTGGAGAGCATATGTCTCGGCGGCTTTTGTCGTGTTACAGACACCGGTTTCAAAACT ATCCTGCATTCTTGCTCCTGCCTACTCAAGCTGAAGGTCACTCATGGGACTCAGTTAACTGACCTAGTTTTTCATGATAT CTCTGCAACATCTCTTACTTTACTACACGTGAGCTTAAGATGGTGCAATCTGTTAACAAACCATGCAGTTTTGAGGTTGG TATCAAATGTGGAGCTTAAAATTCTCGACTTGAGATATTGCAGGAGCCTTGGGGATGATGCTCTCCAGGCCATTGGCACA CTTACAAAACTGAAAGTTTTACTATTAGATGGCTCTGATATAACTGATGCTGGACTTTCATGCTTACGGCCATCTGTTAT TAATTCACTATATGCGTTATCTCTTCGAGGGTGCAAGAGGCTTACCGATAAATGCATTGCAGTTCTATTTCATGGTTGTG GCATGCTGGAATTGAGAGAACTGGATCTTTCTAATCTTCCTAACCTCTCGGATAACGGAGTTCTGATGCTGGCAAAAAGT AGGATTCTCCTTTTTGAACTCCGAATGCGACAGTGCCCTCTAATCGGTGACACTTCAGTCATGGCATTAGCTTCAATGTT GGTTAATGAGGCAAGATGGCATGGAAGCAGTTTACGTGTGTTGGATCTTTACAACTGCGGTGGCATTACACAGCTTTCAT TCCGCTGGCTAAAGAAACCATATTTTCCAAGGCTGAAATGGTTGGGAGTGACTGGAAGTGTTAACAGAGACATGGTAGAT GCTTTAGCTAGAAGTAGGCCCTTCTTGCATGTGGCATGCCATGGTGAGGAGCTCGGGGCTGATCCGTATGATATCTCAGA TGGCTTATATACACATGATTATGATGAGGTGGATGAATTTGAGCAGTGGCTGCTTGAAGCTGATATTGATACTGACGATG AAGAAATGGTTGATGCTGAAAACAATGAAGAACTGGTTATCTAA
CDS sequence (LotjaGi5g1v0351700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGAATCTGGAACACCTCCCTTACGCTCTCCTCGCCACCATCATGACCAAGCTCGACATCGCTTCCATCTGTTC CTTAGCCTCCACCTCCTCCACCTTCCGCTCCTGCGCCAATCAAATCCTCTCTTTCCTCCCCAATTTCCACCTCGTCGACA TTGCGCCTTCTGGGGGTCTGCTGAGACCGTTGCTGCCACCGAACCCTTACCTTCAGAGCCTCAAGGTTGATTGCGGTCGC CTTGATGATTCTGCAATAGCCCTCTTGGTCAAACCCTCCTTGCATGAGCTTTGCCTGCACAACTGTGCCGATTTCAGTGG GAAACTGCTCTCTGAGATTGGAACCAGATGCAAGGATCTAAGGTCTCTCTACTTGGGCTCGGTAGCAGAAAAAAGAGGGA GGGCAATTCATATTTCTGATCTGGAGGAGTTACTCAGCGGATGCTCCCAATTGGAAGCATTGAATCTGATGTTTGACGTC TCTCTCTTTCTACGTCATAACTTTGCTCGAGTTTGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTACAT TTCTTCAGTTACTGTGACTGAACTGCTTAGCCCCAATTTGGGATCCCATCAGTCCTTAAGTCCTGTTCAACCATCCGTAC TTCCAGGCATTCAGAAACTATGCCTTTCAGTGGACTATATAACTGATGCTATGGTTAGTACAATATCTAAAGGTCTTGTC TTTTTGACCCATTTGGATCTTCGGGATGCACCACTGATTGAACCAAGAATTACATTTGACCTAACGAACGCTGGCCTTCA ACAAATTAATCCCCATGGAAGGCTGAACTATCTTTCGCTGATACGAAGCCAAGAGTTCCTCATTACCTATTTCCGAAGAG TAAACGATCTGGGATTACTTCTAATGGCTGACAAGTGTGCAAACTTGGAGAGCATATGTCTCGGCGGCTTTTGTCGTGTT ACAGACACCGGTTTCAAAACTATCCTGCATTCTTGCTCCTGCCTACTCAAGCTGAAGGTCACTCATGGGACTCAGTTAAC TGACCTAGTTTTTCATGATATCTCTGCAACATCTCTTACTTTACTACACGTGAGCTTAAGATGGTGCAATCTGTTAACAA ACCATGCAGTTTTGAGGTTGGTATCAAATGTGGAGCTTAAAATTCTCGACTTGAGATATTGCAGGAGCCTTGGGGATGAT GCTCTCCAGGCCATTGGCACACTTACAAAACTGAAAGTTTTACTATTAGATGGCTCTGATATAACTGATGCTGGACTTTC ATGCTTACGGCCATCTGTTATTAATTCACTATATGCGTTATCTCTTCGAGGGTGCAAGAGGCTTACCGATAAATGCATTG CAGTTCTATTTCATGGTTGTGGCATGCTGGAATTGAGAGAACTGGATCTTTCTAATCTTCCTAACCTCTCGGATAACGGA GTTCTGATGCTGGCAAAAAGTAGGATTCTCCTTTTTGAACTCCGAATGCGACAGTGCCCTCTAATCGGTGACACTTCAGT CATGGCATTAGCTTCAATGTTGGTTAATGAGGCAAGATGGCATGGAAGCAGTTTACGTGTGTTGGATCTTTACAACTGCG GTGGCATTACACAGCTTTCATTCCGCTGGCTAAAGAAACCATATTTTCCAAGGCTGAAATGGTTGGGAGTGACTGGAAGT GTTAACAGAGACATGGTAGATGCTTTAGCTAGAAGTAGGCCCTTCTTGCATGTGGCATGCCATGGTGAGGAGCTCGGGGC TGATCCGTATGATATCTCAGATGGCTTATATACACATGATTATGATGAGGTGGATGAATTTGAGCAGTGGCTGCTTGAAG CTGATATTGATACTGACGATGAAGAAATGGTTGATGCTGAAAACAATGAAGAACTGGTTATCTAA
Protein sequence (LotjaGi5g1v0351700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVNLEHLPYALLATIMTKLDIASICSLASTSSTFRSCANQILSFLPNFHLVDIAPSGGLLRPLLPPNPYLQSLKVDCGR LDDSAIALLVKPSLHELCLHNCADFSGKLLSEIGTRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSQLEALNLMFDV SLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHQSLSPVQPSVLPGIQKLCLSVDYITDAMVSTISKGLV FLTHLDLRDAPLIEPRITFDLTNAGLQQINPHGRLNYLSLIRSQEFLITYFRRVNDLGLLLMADKCANLESICLGGFCRV TDTGFKTILHSCSCLLKLKVTHGTQLTDLVFHDISATSLTLLHVSLRWCNLLTNHAVLRLVSNVELKILDLRYCRSLGDD ALQAIGTLTKLKVLLLDGSDITDAGLSCLRPSVINSLYALSLRGCKRLTDKCIAVLFHGCGMLELRELDLSNLPNLSDNG VLMLAKSRILLFELRMRQCPLIGDTSVMALASMLVNEARWHGSSLRVLDLYNCGGITQLSFRWLKKPYFPRLKWLGVTGS VNRDMVDALARSRPFLHVACHGEELGADPYDISDGLYTHDYDEVDEFEQWLLEADIDTDDEEMVDAENNEELVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 600 | 597 | 4.8E-271 | – | |
| SUPERFAMILY | 4 | 41 | 38 | 1.31E-5 | ||
| PANTHER | 4 | 600 | 597 | 4.8E-271 | – | |
| Pfam | 5 | 42 | 38 | 4.0E-5 | ||
| Gene3D | 53 | 408 | 356 | 9.9E-36 | ||
| SUPERFAMILY | 59 | 254 | 196 | 1.41E-12 | – | |
| SMART | 91 | 116 | 26 | 520.0 | ||
| SUPERFAMILY | 293 | 559 | 267 | 1.04E-23 | – | |
| SMART | 306 | 331 | 26 | 7.6 | ||
| SMART | 358 | 383 | 26 | 10.0 | ||
| SMART | 385 | 408 | 24 | 13.0 | ||
| Pfam | 386 | 405 | 20 | 0.47 | ||
| Gene3D | 409 | 491 | 83 | 9.7E-12 | ||
| SMART | 434 | 459 | 26 | 250.0 | ||
| SMART | 462 | 487 | 26 | 0.0035 | ||
| SMART | 488 | 513 | 26 | 38.0 | ||
| Gene3D | 492 | 579 | 88 | 1.6E-5 | ||
| SMART | 522 | 547 | 26 | 350.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0351700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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