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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0353800 |
| Transcript ID | LotjaGi5g1v0353800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium binding protein-like; TAIR: AT5G08580.1 Calcium-binding EF hand family protein; Swiss-Prot: sp|Q6XLQ7|CALU_RABIT Calumenin; TrEMBL-Plants: tr|I1NF42|I1NF42_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0353800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66938922..66944994) extracted from Lotus japonicus Gifu genome v1.2.
TAGAAATATAAAATATGGTAATTTAGAGAAGTGAGATTTAAATAAAAAAAATAGGTATCTATGGTATGATCATGAATGTA AGTTGAATCGAAAGGAAAGAAACAACAATAGAAGTAGAAGTAGAGATAGATCTGGGTGGTTCTTGTCTCAATGGGCAGAG CCTCCATATTCGTTTACATCACCGTTGCACTCGTCGTTCTCTTGTTCCTCTCCCTCTCCCCCAAACACAACCACCTTAAC CACCGTCACCGCCGCCTCAAACTCCGCTCCAACTTCACACTCTCTCCCGCCCGCCACCACTCCGTTGCCTTCGACCCCCT CGTCGCCGAGCTCGAACGCCACCGCGAAGACAAAGAATGGGAGAAGCAGCACATCCACCACTCCCACCCCGAGCTCGAAC GACCCCCCGCCGACAACCACCACGACTCTGCCCCCGCTCACGAGTCCCAGCCCGAGTGGGAGGACTTCATGGACGCTGAG GACTTCATCAATGACGAGGACAAGTTCAATGTCACCAGCAGGTTGCTCCTCCTCTTCCCCAAGCTCGATGTCGACCCTAC CGATTCCTTCGTCTCGCTCCACGAGTTGACTCAGTGGAACCTCCAGCAGGCGCAGAGGGAGGTTCTGCATCGGTCACAGA GGGAGATGGACCTCCATGACAAGAACCGTGATGGGTTTGTTTCCTTCTCCGAGTATGATCCTCCCAGCTGGGTTCAGAAT GCAGGTTCTGTTTCTCATTCTGGATCTGCTTGATACGGTTGTTTTGTTTGATAGTGATCTTTGATCTTGCACATTTGTTG AATGTTGTTGTGTTTTACCAGATAATGATTCTTTTGGTTATGATATGGGTTGGTGGAAACAAGAGCATTTTAATGCATCT GATGCAGATGGAGATGGCCTTCTGAACTTAACTGAGTTCAATGAGTGAGCTTCTACTACTTGTTAGGAAAAGTTGTTGTT TGTGCACGCATGTCTATTGTGTTTTATGCTAATGGGTTTTCTTTTCTTCGCTGTTTTTTAGCTTTCTGCATCCAGCTGAC AGCAAAAATCCAAAGCTTCATCAGTGGTTGTGCAAGGAGGAAATCAGGTAAAGCTAATCTCATAGAAACTCTTGAGAGTT AAGGGATTTCTGATGCAATGCTGTTCCCATTATAGTCTCTTGTATCATCGATTTATTACTTTCCTTAATTTTCAAGTATG TAGTTGTGTATCTTAAGATAATTCAAGACATAATATTAATATTAAAGCATATGTGATGTTATAATAATTGCATTTGACAC AAGTATGACTTAGATATCAAGTTACTGAATTACTATAATCTGTTTCATTCTCCTAATAATGAATTACCACTCCGCTTTAG GCGGCCACACATGGGACTGCTAAACAAGCATAGACTTTAGTCATAAAACTAGGACTTCAAGCCATCAATCGAAAAGCATG CCAACGAGCGAATAAAAGAGAAATAGATTTTGTGTACTGAGAGAGATTGATTTTGCATGTTTTATAATTGAAATAGTGAA GCTTCCATTAAGCAGGGGATGCTGGTAGAAATGGGAATATATGAATGTATGCCTCTAAAATATGCAGCATTGCTGTATAT TGTACTTTTGTTACCTCAAATTCTTGACTTCGATTTTTCTTTACCATCCATTTGCTCCTAAACTATCTTTAGCCTAATAT ATCCTGATTGATGTTCAAGATCATGTTTAATCTCATTAACATTGCAACTTGTGCCCTGATTCCTGAAGACTAGATTTCTT GGGGTCACCTGAATCTTTGCACCCTATTAAGATTAGAGTTATTGACCAAAAAAAAAAGATTAGAGTTGAATGTTTCAATC CCTTGTATCCCAGCTTATTTCTTGTTAGCGATGGATTTATGATTAAGTTTCTCATGAAATTGAATTTCGAATGGGAATTT TCAGTCTATATGCAATTAGCTTATTTGTCCCACCCCCACTGCTGTGACTTACACTTGCTTGGTGTACCCTTTTATTTCTT ACAGGGAAAGAGATTCGGACAGAGATGGGAAGGTCAACTTCAAAGAATTTTTCCATGGGCTCTTTGATTTGGTAAGAAAC TATGATGAAGAAAATCACAATGATTCACATCATTCTGATGACTCTATGGATGCTCCAGCAAGAGTGTTGTTTGCACAGCT TGACAAAGATGGTGACGGGTATTTACCTTATTTTTTCATCATTCGTCTACTTTCTTTGATTCATTATGGTAGTCTCCTTT GTAGCATATTATCATCCATGTTTGGGTTTTCATCTCAATCTATGCAGGTTTTTGTCAGATGTTGAACTGCTGCCTATAAT TGGGAAACTTCATCCATCTGAGCATTATTATGCAAAGCAACAAGCAGAATATATCTTTTCACAGGTATGGAATTTAACCT TAGGATAATTACACTCGTATTGTTGACAAGTGTGCATTTTGTTTTCCTGGTGAAGTCATCTGAAATGCGAATCACTGTTT ATTCTTTTGATATTGGCTTTACATGGGTTACACATAACTGTTTTTTGAGTAAATAATGTGTGCTTTGATCGGAATCCAGT TATTAGATTATAGAAAAGTATGAATGATTTCCCATTAAAGAAACAGATTCACAAACATTCAATTTGATAGGAACCCATTA GGACTGATGAGTATTTGCTTGGAAGAACAGGGGAAGACAAACAACATGATTAGTTGACAATTCCAATGGTTTGTCAGAGG AGATTAGTTCAATAACTAAATAGGGGGAATGTAAAGGTAGAGGGATCACTAATGACTTCAGCATTTGTGAACATAGCATT AGCCCCTCCGTCAAAGGGAAACCCTTTGTGAAGGAGAATTGCTCCCCCTTTATTTTTTATAAAGATTCACGTACTTTTTC TACTCTATCCATTGATTCTCTTATGCACGGGTTCATAGTATATTGGTCATTGAGGAAGAAATTTAGAATTTGGGTTAGTT CTCGAAGAAGGTGACTAGCTATCATGATCAATGAATTGCAGCTTTGTTTGTGGGATTCTAGTTTTTTTGAGCTAAAGCAG ATGTTTTCCTGCCTCAATTTAAAGGACTTGATGGTGAGGACAAAAAGATGGAAGCGCCACCTAATATGATTAAGAAGAAT ATTAGAGGTATGTCAGAAATAATCCATCTGCTTGGTCAGTGGATGCAGAAACAAGGTATTTAATTGGAGGACGAGGGCAC CATGTACAACCTATTCAGGAGTAGGTTCAATCCCATTCGACTAGGAAGCTTAAGAAAAATGTTGAAGAGAGTAGGTTATA TTGTGATGGTGGACTGTGGACAGGCTTGTTCTTGGGCAAGGAAGGTGGAGTATTAACCATTTGGGATGGTTCACTGAGCA GGAAAAACGCTGAGGTGGACCAGATAAAGACTTCAGAGAAGGTTCAAGAGGAACTAGATACGGGGACATTATCAAACCCT GTGGTAGAGATATGCTTGAGGCCAAGCTTAATGTAGAGGAGATCAAGGTGGACGGAAAAGAAGCAGGGTTTCATTCAGGA CTGTGGAGATTTGGGTTGTATGGAGTTTGGTTGCACCCCACCACCACTGGAGCTGTTGGATACAGCTTACATGAGGCAGC CAATGGCCAGTAAACACACTGTAGTCTGCGCCAAGATATGTCTTGCTGTTCCTGGTATAGGCAACTTGGCTCTGGAGGAG GAGAAAGAGGGAAGGACAGAAGTGGTATTCTGTAAAGTGTGTCTAATTCTTAAACTACTGGGCCAGGCCCAAATTATCTC AATAATTTGATAGTGAAGGAGGGCTAAATTGGAAATTCTGCCAACCAAGTTCATTTTGGACTTAATGCGCCAAGCCAAGC CTATGGAAAATAAAGTGCGCCCTGGGGCATTCTTTAACAGTCCTTGTGGGGCATAGATCAGAATGGGAAGACAACAGCAT AGATAATTACTCAGCTCCTGCTATTAAAGTTGGCCCTTAAACTTATCAGGCATGGCAATTTATGGAGTCAAGTTATGACG ACCACTGAGTATGGGGTGTTTTTGTAAGCAATGAATTAGAAGGAACTGCTCATTCTTCTGAATATAATAATGCCCAAAGA AGTGTTTCTTACATTTCCAGTTTTCATATTTCAACCTTGAGGACAAGGTTGAACTTCTATGGGGTGGTATTGTTTGGACA CAAGAGTTTTTGCTGGGAAAATTAAAGGGAAGACAAACAAAATAGTTAGTTTTGATCGTTGATCCTTAGAGCAGATAGTT GGAGGGGATTATTATTTAGACAAATTAATGGGGGATGTAAGGGTAGAGGGATCATTCTGAATTGTTAGCATGTGTGAACA GGCATTAGATCCTTTGTGAAAGTTAACTTACTCTCCCTCATTCCCTGCAAACTGAAAGCTAATTGAAACACTCAAAAAAC AGAAGATGAAGCAGTCTTTCCCTCAGCTCCTGCCCCTTCTATCCTCCTTACTGATTTCTCTTCTGTAGTCATGTGAATTT GTAGCTGCATTTATTTAGTATTTATTGGTCAATGATGAGTTCCCATTCTTTCAGGATGAGAATATTGGATACGTTCTTTC TATGTAATCCTTTTTGGGATAAATGTTGTCAGCTCCTTTTAATTGTTATAGCTTCTTGAGGGACTTTGTACATCAATTTT GTCATCCATTTCTTCTCTCCACTTTTCCAGTTTATGGCTGTTGAATGCACATTTTGCATTTGCTTATGGTGCAATGATGC CCTCATTTCTGATATAATAAGTGCATAGATCAAGCTAGATTCATCTCCACTCCTTGCTCCTGAGGAAACTTGTTTTAAAT GGTTTTCTTTCCATGTGAAGTGTGAAGTGTTATATGTTAACCAGTCTTTCTGCTATTGGAGGGTTTATCTCGCCATGCTT GATTTACATGGCAGGCGATTTTAACTAGATGCTAGGGTCGAATTAAATTGTCTTCACGATTGCCTCAGCATGCACCCTGA CATGACATCTGTTGCCTAACATCTCATTAAACCATTGTAATAATACTATGAGAAGCAGATATTGACAATGATAGCTCAAC AAGCACTCCCAACATCTATGGAATAACATCATACATTAATTTCAGCATAACCATTGTATTTTGTATATACTCATGAAATA ATGTTATGACAGGCAGACGTTGACAAAGATGGACACCTTACTTTGACTGAGATGATTGAGAATCCATATGTATTTTATAG TGCTATTTTCAATGATGATGAAGATGAATATGATTACCACGACGAGTTCCGGTAAATTCATGTTAGGTAAATCCTGCTCT CGTCAGTCTTAATGCTTTTATAACTAATTCTAAAGTAACATTAGATTAGAAGCTTATGTGAGCAGCTTTTGGGTGTCAAA GTTGATTTTGAAAAGAAAAAAGCTGATCCAAGCGTTGTAATAATCGATTGAAGGATACACGGAAAAGTTTGGCACAATTC TAGTGACAAGGAATCGGTATTTGAAGTTCATGACATGACAGAATCTTGATGTTGTGGCCCTTGGTAGGTTCCTAGTCTCA ATCCTGGTGGGGTTTTGTACGGCGGCAACATTTATTGCTTCTTTCCCTTCATATTGTCTGGAGTTCTTATTTGCTGATAG GATCCACCGTGGCTTGTTGTAGAGTCACACCTGGATCAGTTGGAGGATAACATGATCCAAACTTCCATTGTAAAATTTGT AGAATGATATACATATTTTGAATCACTGGTTGAGCCATCATTAATTAAGCAGAACGCATCAATTTTCAATGGATAAATAT ACTACATGTACCATATGACTGTGTCAATCAGGGCATGATCATAGTAGTACTTTCAGAAATTTTTTGGACCCAAGTAGCAG TCATTTTGTTTAGTAAAATGTTTATGAAAAGGTAACAGTTGTGGTGTTTGGACAGAGTTGAGTGCAACATGACTTTAATT CTGATTTATAAAGAGTTTCATTTACTTTTTATGTCACTTATGTTAAGAGTATCCAAACTTGCCATAAAAGCTCAGTGTAA AACTCTATTTTACACAAATACAGTTGTGATCCATTAACTTAGTCTCACAATTTTTTCTTTATTAATTTTTTTT
CDS sequence (LotjaGi5g1v0353800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAGAGCCTCCATATTCGTTTACATCACCGTTGCACTCGTCGTTCTCTTGTTCCTCTCCCTCTCCCCCAAACACAA CCACCTTAACCACCGTCACCGCCGCCTCAAACTCCGCTCCAACTTCACACTCTCTCCCGCCCGCCACCACTCCGTTGCCT TCGACCCCCTCGTCGCCGAGCTCGAACGCCACCGCGAAGACAAAGAATGGGAGAAGCAGCACATCCACCACTCCCACCCC GAGCTCGAACGACCCCCCGCCGACAACCACCACGACTCTGCCCCCGCTCACGAGTCCCAGCCCGAGTGGGAGGACTTCAT GGACGCTGAGGACTTCATCAATGACGAGGACAAGTTCAATGTCACCAGCAGGTTGCTCCTCCTCTTCCCCAAGCTCGATG TCGACCCTACCGATTCCTTCGTCTCGCTCCACGAGTTGACTCAGTGGAACCTCCAGCAGGCGCAGAGGGAGGTTCTGCAT CGGTCACAGAGGGAGATGGACCTCCATGACAAGAACCGTGATGGGTTTGTTTCCTTCTCCGAGTATGATCCTCCCAGCTG GGTTCAGAATGCAGATAATGATTCTTTTGGTTATGATATGGGTTGGTGGAAACAAGAGCATTTTAATGCATCTGATGCAG ATGGAGATGGCCTTCTGAACTTAACTGAGTTCAATGACTTTCTGCATCCAGCTGACAGCAAAAATCCAAAGCTTCATCAG TGGTTGTGCAAGGAGGAAATCAGGGAAAGAGATTCGGACAGAGATGGGAAGGTCAACTTCAAAGAATTTTTCCATGGGCT CTTTGATTTGGTAAGAAACTATGATGAAGAAAATCACAATGATTCACATCATTCTGATGACTCTATGGATGCTCCAGCAA GAGTGTTGTTTGCACAGCTTGACAAAGATGGTGACGGGTTTTTGTCAGATGTTGAACTGCTGCCTATAATTGGGAAACTT CATCCATCTGAGCATTATTATGCAAAGCAACAAGCAGAATATATCTTTTCACAGGCAGACGTTGACAAAGATGGACACCT TACTTTGACTGAGATGATTGAGAATCCATATGTATTTTATAGTGCTATTTTCAATGATGATGAAGATGAATATGATTACC ACGACGAGTTCCGGTAA
Protein sequence (LotjaGi5g1v0353800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRASIFVYITVALVVLLFLSLSPKHNHLNHRHRRLKLRSNFTLSPARHHSVAFDPLVAELERHREDKEWEKQHIHHSHP ELERPPADNHHDSAPAHESQPEWEDFMDAEDFINDEDKFNVTSRLLLLFPKLDVDPTDSFVSLHELTQWNLQQAQREVLH RSQREMDLHDKNRDGFVSFSEYDPPSWVQNADNDSFGYDMGWWKQEHFNASDADGDGLLNLTEFNDFLHPADSKNPKLHQ WLCKEEIRERDSDRDGKVNFKEFFHGLFDLVRNYDEENHNDSHHSDDSMDAPARVLFAQLDKDGDGFLSDVELLPIIGKL HPSEHYYAKQQAEYIFSQADVDKDGHLTLTEMIENPYVFYSAIFNDDEDEYDYHDEFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 22 | 18 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| PANTHER | 7 | 378 | 372 | 1.4E-106 | – | |
| PANTHER | 7 | 378 | 372 | 1.4E-106 | – | |
| Phobius | 25 | 378 | 354 | - | – | |
| MobiDBLite | 68 | 101 | 34 | - | – | |
| Gene3D | 120 | 269 | 150 | 5.6E-15 | – | |
| SUPERFAMILY | 124 | 182 | 59 | 1.64E-6 | ||
| ProSiteProfiles | 157 | 182 | 26 | 5.922 | ||
| SMART | 161 | 191 | 31 | 150.0 | ||
| ProSitePatterns | 170 | 182 | 13 | - | ||
| Pfam | 170 | 181 | 12 | 0.15 | ||
| SMART | 203 | 231 | 29 | 14.0 | ||
| SUPERFAMILY | 205 | 357 | 153 | 6.67E-24 | ||
| ProSiteProfiles | 205 | 234 | 30 | 9.464 | ||
| Pfam | 208 | 227 | 20 | 0.034 | – | |
| ProSitePatterns | 212 | 224 | 13 | - | ||
| SMART | 242 | 270 | 29 | 0.5 | ||
| ProSiteProfiles | 243 | 273 | 31 | 8.265 | ||
| Pfam | 246 | 269 | 24 | 0.017 | – | |
| ProSitePatterns | 251 | 263 | 13 | - | ||
| Gene3D | 270 | 356 | 87 | 2.6E-14 | – | |
| ProSiteProfiles | 288 | 323 | 36 | 9.827 | ||
| SMART | 292 | 320 | 29 | 9.1 | ||
| Pfam | 296 | 353 | 58 | 6.5E-8 | ||
| ProSitePatterns | 301 | 313 | 13 | - | ||
| ProSiteProfiles | 327 | 362 | 36 | 9.492 | ||
| ProSitePatterns | 340 | 352 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi5g1v0353800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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