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LotjaGi5g1v0360500.1

Overview

Field Value
Gene ID LotjaGi5g1v0360500
Transcript ID LotjaGi5g1v0360500.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Macrophage erythroblast attacher; TAIR: AT3G55070.1 LisH/CRA/RING-U-box domains-containing protein; Swiss-Prot: sp|Q7SXR3|MAEA_DANRE Macrophage erythroblast attacher; TrEMBL-Plants: tr|A0A0R0I117|A0A0R0I117_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0360500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:67477175..67481936) extracted from Lotus japonicus Gifu genome v1.2.

GTTCGAGTGTTCCGTTCAGCTACGTCCCGTGTGAGAAGGATTACACTCCAGATTACTTAGCTCATCACGCGGGGAACTCA ACGGCGTGTCTGAAAGGACCCCCTCCTTTTGATTCGGCGCCGTTGTACTTGAATGACGTTTGCTATTAATTTTTCTCTTG TAAAAAAAATTATGTTTAGTGTTTAGTTACAATTATCGAAATAATTACATGGAAATAGATTTTGTTTTGTAGGAGCGTAT ATATATATTCATACAATTGCAATCTGAGATTCTATTTTCCCCTTTCTTCACGATGGAAATGGATTCGCTTCCGAATGGCA ACAACACCACCGGAACCCCGATCGCCGCCGGCGCCGGCGCCAATCCCACGGCTCCTCCGTCGTCAAACCTCCCTCAATTG ACAGAGTCTCTGAAGTTGGAGCATCAGTTCCTGAGGGTCCCTTTTGAGCACTACAAGAAGACCATCCGCGCCAATCACCG CGCCGTAGAGAAAGAGATGTCCGCTGTTATCTCCGGCGTCACCGATGCCGCCGCCGCTGACTTTTCCCCCGATGACGCCG TCAACCACCTTAACTCTCTTGTCTCCCGCCTGCAAGGGCTCAAAAGGAAGGTAACCAACTGCTGACCTAAATCTTGAATT GTTCACGAAGCACACACGGTTACAGTATTGGAAATTATTTGAATTTTGTGTTTCTATTTGGTTGTTCAATTTGATTAGTT TAAGCCCAATTTTTCTTGGTTTCAAATTCTGTGGATAATTTGATTCTTTACCAAATACACTGACTTTGTTTTAGTTGTAA TATAGTTACTGTTAGGACTTATGATCTTTAGCATGCTTGATGATCATTAACTGTTGTGCTATTAATGATCATGGTTGTAA TTGTGAAAATGTTAAGTTGGAGGAAGGAAGTCTGGCAGAGCATTTGCAAGCTCAGAAGTGTCGAGCCCGTATCGATCATT TAGAGTCTGCTGATGCAGACAATCTGTCAGAATGGAATAACACTCGCTTGAAGCGGATTCTTGTTGATTACATGTTGAGG ATGTCATATTATGACACTGCACAGAAACTCGCCGAATGCAACAACTTGCAGGTAATTAATATAGTGTTCCTCTGTGGATG CTGGCAATGCGCTGCTCTTTGTGATTCTTCTCCATGTGATAAGTTGCAATCTGCTTTTTGTGCCACTTTGATTTTAACAG TAGTATTATTCATCTTTGTGCATCAGGATCTTGTTGATATTGATGTGTTCCAAGAAGCAAAAAAGGTTATTGATGCTTTG CAAAATAAGGATGTTGCACCTGCCCTAGCATGGTGTGCTGATAACAAACCAAGGCTGAAGAAGTCTAAGGTTCATAATGC CATTTGAACTTATTAATAATTGCTGCACCGTACCTGCAACTTATTGAAAACAAAAGAAACGAAAAGAATGGTCTAAGTCT AAGTCTGGTTCAAAATTGAAAAGAAAAGAAAAACTAATGGCCTAATGCTAATATCCTCTGGTACCGTTAGGTTTTGTCAT GTGATGTTATTATTAGTAACAAAAGCATCATTAGGAATCGAACCATATTTACTATTGTTAATTTAGAGTTGGTTAATGGC AACAGAGCAAATTGGAGTTCCAGTTGAGACTTCAAGAGTTCATAGAATTGGTAAGAGCTGAGAACAACTTGAGAGCCGTC GCATATGCTAGGAAATATCTTGCGCCATGGGGAGCCACCCACATGAAAGAATTGCAGCGAGTCCTCGCAACACTAGCTTT TAGAAGAGATACTGAATGTGCCACTTATAAGGTGAGCATGCCTAGTGTTTGTGTGTTTTTGTGCATTAGTGATACTGGTG ACTCTTTGATTTTGTTATTTATTTTAGTGCAACAAGTTAGAACGTGTGTATATCTATAGTTGTTAGAATTGTGCATTAAA GATTTGATTTATGATTTATGCCCTTTTTCCTATCATTTGTTGAATCACAGTTGGCTTTGAATTTTGCCTGTATTGCACAA ATCAGTGCAAATTTTTCCATCAATGCGGATGGTCCTGCCATCGGGTATCAACCCAACAAATTTTATTTTTATTTTTTGCT TTTTTCCTCCCACCAATCCTCATCTGAGAATTGGAAAGGAAAGAGTGACATGCAGTGTTAAATAAAAGGGGCATTACATT TTGTACCATGCTGCTTGCTCTGTTTTTCTTTCGGAAGGGGGGATGCCTACTTGTTCACATTTGCAGACCTGTCACTAAAC TTACACTGTTTGCTTCTTCGTGTACTGGATGCACATTTTATTCTTCTGGTTTTGGGTGTTCACAGTCACTCTCAAATGGT TTGAAGTTCTGATTTTAAAACATTTGTGACATGATTCATGATGATTTTAGAAATATTAATATAAAACCATTCATGTGTCT AAAAGAAACATGAATTAATATATATTGTTTTTTTTTTGTGTGGATGGAATTATGGTACTTATTGAGTTTATTATTTCCTT AGTGGCATCTAATATTTAAATGTTTATTTGAGTTTTTTTAGTATTGTATTCAGATTTGGCTTCACTAACGTGAGAGAGGG CCGACTTTGAAGGATAAAGTGCAAAATTATAATTGTTGATCGGAAAAATCAATGGTTGAAATTTGTAAAATTTCACAGTT AGCATATATGTATATGTATTTAGTCACAATCTCGAAAGTGTACATTATTCTCTAAAGAGCACCCATTTCTTTAGAGGAGT CCAAACCATTTTGTTCACGTTTTTGGTGTGGAGTGATGTATATTTGAGTTTTTTTATTTATTGATGCTTTTCTAAAAAGC TGGACAAATAATGTTTTTTTTTAGGTAGACACATGATTCTTGATATGCTTTACGATTTGTTAACTAGTTTGTATCAACAA CAGAAAAATTTGGAGGTGGAAGATTCTGTGGTTTTTATTTTGAAATTTTGTAGAATTATGAACTTCTTTTTGAAGAGCGT GTAATTCTTAAAAGTATCTGTAGTTTTCTTACAGAAAAAAAAAGGAATAAAAAGGAATATGCTAATGGCTCTATCTAATT GATATGAACTGTGACTGTTTCATGATGTTTTCTAGTTGTTAATACTTGTAAATGACAAACCTAGGGCTGAGTTTAGCAGT AAATTGTAATATATCCTACATGTTTTAATAATCATCGTGGCTTGTATCATACATTATGCACCTCTTACCCATTTTTCACG GTCAAGCAAAATTCTTACTTTGTTGATTAAGAAAGAAACAAGAACAATTATTCGTGTGAATTTTGATTTTTTCCTATCAT TTATTGAACAAAATCTTTATGCTTATTTTATTTCCATTGAAGTTTTATCATCAACATGATAATGGTGCGTCTTGATACTT TTTTTCTGTGCTGGACTTTTTGCTTGATATTATATTTTCTATTATTAGGGACCTACCATTTCAGCAGAGAATTATTTGCA ATTTCTTTTGCATAACATTTTACAGGTCTTATTTGAAGCTAAGCAATGGGATTATCTAGTTGACCAGTTCAAACAGGAGT TCTGCAAGTTGTATGGCATGACATTAGAGCCATTGCTCAATATCTATCTGCAAGCTGGCCTGTCTGCTCTCAAGACTCCG TATCCCTTAACAACTTGAACTGTAGACTATCATCTGCTAGTACAGTGTTTTAAGCTAAATACCCTATCCTTTGGGGATTG CCATGCTTCATCTCTCTTGCATGCATATGACTGACCCCTGCCCCACACACACAAAAATGAAAATCTTAAAACCACTTGGA CTCTCCTCAATGGGTTGTCTTGGTATCTTAAAATCCTCCATATTTAACAGTTCCAAGACATTCATCATATGATATTTCAT TTTACATTTGGCAATGCTAACCTTGTCTTTTGACCCTTTATGTAGCAATTCATGATATTCGTAGTAGTTTATTTTATGGT ACAGCTACTACAGTATACAAATCATATTTTTCTTTGGTGACTAAGGTACACTTGATTTTTATATGGTAGTTCTCAAGTTC TTACTGATATGTTATTAGCATTCCTACAATTTTTCCTTGGTATGGCTCCTGCCACCTCAGTGCTTCTCATTTTCATCTTT ATGCTAATGAGTATACATTAATGTTCCTTGACTTGATAAAGATATTGTTACGAGGACGATTGCACAAAAGAGGACCCTCT ATCGCAGGAGGCTTTCCGCACACTAGCCTTGCCATTACCATATTCAAAGCAGCATCACTCAAAGCTTGTCTGCTACATAA CAAAGGAGCTAATGGACACTGAGAACCCACCACAAGTCTTGCCCAACGGATATGTCTACAGCACTAAGGTCCCTGCTATT CTAAATGTTCTACTATATATATATGCCTATAAAGTATTAGGCTAAGTTCATGTTTTATTGATTTTTTGCAGGCTCTTGAA GAGATGGCTAAGAAGAATAATGGTAGAATCATCTGCCCTAGGTCAGGTGTAGAGTGCAACTACGGGGATCTGATGAAGGC ATATATTTCATGAGTCTGCGTACTTGGGCTTGATTACTGATTGAAAATGTTCCATACATTTACTTGCTTTCCATGTTGAC TTGTACATATGTAAGATGTTTAAAGTGTCACTGAGATATGACTTAAATGTGTGCATACACTGATTTTTTTTCCCCACTGG ATGAACTTCTCTGTCATGCGACAATAGTTTTTTCCCCACTGAAAATGGATAACACCTTGGAATGAATGAATTCCATCAAT GGAAGTACGTTCCTTTTGTTATTATGGTGTAGTGTAGCTTGC 

CDS sequence (LotjaGi5g1v0360500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAATGGATTCGCTTCCGAATGGCAACAACACCACCGGAACCCCGATCGCCGCCGGCGCCGGCGCCAATCCCACGGC TCCTCCGTCGTCAAACCTCCCTCAATTGACAGAGTCTCTGAAGTTGGAGCATCAGTTCCTGAGGGTCCCTTTTGAGCACT ACAAGAAGACCATCCGCGCCAATCACCGCGCCGTAGAGAAAGAGATGTCCGCTGTTATCTCCGGCGTCACCGATGCCGCC GCCGCTGACTTTTCCCCCGATGACGCCGTCAACCACCTTAACTCTCTTGTCTCCCGCCTGCAAGGGCTCAAAAGGAAGTT GGAGGAAGGAAGTCTGGCAGAGCATTTGCAAGCTCAGAAGTGTCGAGCCCGTATCGATCATTTAGAGTCTGCTGATGCAG ACAATCTGTCAGAATGGAATAACACTCGCTTGAAGCGGATTCTTGTTGATTACATGTTGAGGATGTCATATTATGACACT GCACAGAAACTCGCCGAATGCAACAACTTGCAGGATCTTGTTGATATTGATGTGTTCCAAGAAGCAAAAAAGGTTATTGA TGCTTTGCAAAATAAGGATGTTGCACCTGCCCTAGCATGGTGTGCTGATAACAAACCAAGGCTGAAGAAGTCTAAGAGCA AATTGGAGTTCCAGTTGAGACTTCAAGAGTTCATAGAATTGGTAAGAGCTGAGAACAACTTGAGAGCCGTCGCATATGCT AGGAAATATCTTGCGCCATGGGGAGCCACCCACATGAAAGAATTGCAGCGAGTCCTCGCAACACTAGCTTTTAGAAGAGA TACTGAATGTGCCACTTATAAGGTCTTATTTGAAGCTAAGCAATGGGATTATCTAGTTGACCAGTTCAAACAGGAGTTCT GCAAGTTGTATGGCATGACATTAGAGCCATTGCTCAATATCTATCTGCAAGCTGGCCTGTCTGCTCTCAAGACTCCATAT TGTTACGAGGACGATTGCACAAAAGAGGACCCTCTATCGCAGGAGGCTTTCCGCACACTAGCCTTGCCATTACCATATTC AAAGCAGCATCACTCAAAGCTTGTCTGCTACATAACAAAGGAGCTAATGGACACTGAGAACCCACCACAAGTCTTGCCCA ACGGATATGTCTACAGCACTAAGGCTCTTGAAGAGATGGCTAAGAAGAATAATGGTAGAATCATCTGCCCTAGGTCAGGT GTAGAGTGCAACTACGGGGATCTGATGAAGGCATATATTTCATGA 

Protein sequence (LotjaGi5g1v0360500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEMDSLPNGNNTTGTPIAAGAGANPTAPPSSNLPQLTESLKLEHQFLRVPFEHYKKTIRANHRAVEKEMSAVISGVTDAA AADFSPDDAVNHLNSLVSRLQGLKRKLEEGSLAEHLQAQKCRARIDHLESADADNLSEWNNTRLKRILVDYMLRMSYYDT AQKLAECNNLQDLVDIDVFQEAKKVIDALQNKDVAPALAWCADNKPRLKKSKSKLEFQLRLQEFIELVRAENNLRAVAYA RKYLAPWGATHMKELQRVLATLAFRRDTECATYKVLFEAKQWDYLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALKTPY CYEDDCTKEDPLSQEAFRTLALPLPYSKQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGRIICPRSG VECNYGDLMKAYIS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 34 34 -
PANTHER 27 414 388 2.8E-177
PANTHER 27 414 388 2.8E-177
ProSiteProfiles 140 172 33 8.3
SMART 178 235 58 1.6E-14
ProSiteProfiles 178 235 58 13.725
Pfam 179 320 142 6.2E-41
SMART 231 325 95 7.3E-25
ProSiteProfiles 326 399 74 14.21
SUPERFAMILY 349 411 63 8.65E-6
CDD 352 400 49 1.48616E-25

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Biological process Negative regulation of gluconeogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0360500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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