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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0360500 |
Transcript ID | LotjaGi5g1v0360500.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Macrophage erythroblast attacher; TAIR: AT3G55070.1 LisH/CRA/RING-U-box domains-containing protein; Swiss-Prot: sp|Q7SXR3|MAEA_DANRE Macrophage erythroblast attacher; TrEMBL-Plants: tr|A0A0R0I117|A0A0R0I117_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0360500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67477444..67481644) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAATGGATTCGCTTCCGAATGGCAACAACACCACCGGAACCCCGATCGCCGCCGGCGCCGGCGCCAATCCCACGGC TCCTCCGTCGTCAAACCTCCCTCAATTGACAGAGTCTCTGAAGTTGGAGCATCAGTTCCTGAGGGTCCCTTTTGAGCACT ACAAGAAGACCATCCGCGCCAATCACCGCGCCGTAGAGAAAGAGATGTCCGCTGTTATCTCCGGCGTCACCGATGCCGCC GCCGCTGACTTTTCCCCCGATGACGCCGTCAACCACCTTAACTCTCTTGTCTCCCGCCTGCAAGGGCTCAAAAGGAAGGT AACCAACTGCTGACCTAAATCTTGAATTGTTCACGAAGCACACACGGTTACAGTATTGGAAATTATTTGAATTTTGTGTT TCTATTTGGTTGTTCAATTTGATTAGTTTAAGCCCAATTTTTCTTGGTTTCAAATTCTGTGGATAATTTGATTCTTTACC AAATACACTGACTTTGTTTTAGTTGTAATATAGTTACTGTTAGGACTTATGATCTTTAGCATGCTTGATGATCATTAACT GTTGTGCTATTAATGATCATGGTTGTAATTGTGAAAATGTTAAGTTGGAGGAAGGAAGTCTGGCAGAGCATTTGCAAGCT CAGAAGTGTCGAGCCCGTATCGATCATTTAGAGTCTGCTGATGCAGACAATCTGTCAGAATGGAATAACACTCGCTTGAA GCGGATTCTTGTTGATTACATGTTGAGGATGTCATATTATGACACTGCACAGAAACTCGCCGAATGCAACAACTTGCAGG TAATTAATATAGTGTTCCTCTGTGGATGCTGGCAATGCGCTGCTCTTTGTGATTCTTCTCCATGTGATAAGTTGCAATCT GCTTTTTGTGCCACTTTGATTTTAACAGTAGTATTATTCATCTTTGTGCATCAGGATCTTGTTGATATTGATGTGTTCCA AGAAGCAAAAAAGGTTATTGATGCTTTGCAAAATAAGGATGTTGCACCTGCCCTAGCATGGTGTGCTGATAACAAACCAA GGCTGAAGAAGTCTAAGGTTCATAATGCCATTTGAACTTATTAATAATTGCTGCACCGTACCTGCAACTTATTGAAAACA AAAGAAACGAAAAGAATGGTCTAAGTCTAAGTCTGGTTCAAAATTGAAAAGAAAAGAAAAACTAATGGCCTAATGCTAAT ATCCTCTGGTACCGTTAGGTTTTGTCATGTGATGTTATTATTAGTAACAAAAGCATCATTAGGAATCGAACCATATTTAC TATTGTTAATTTAGAGTTGGTTAATGGCAACAGAGCAAATTGGAGTTCCAGTTGAGACTTCAAGAGTTCATAGAATTGGT AAGAGCTGAGAACAACTTGAGAGCCGTCGCATATGCTAGGAAATATCTTGCGCCATGGGGAGCCACCCACATGAAAGAAT TGCAGCGAGTCCTCGCAACACTAGCTTTTAGAAGAGATACTGAATGTGCCACTTATAAGGTGAGCATGCCTAGTGTTTGT GTGTTTTTGTGCATTAGTGATACTGGTGACTCTTTGATTTTGTTATTTATTTTAGTGCAACAAGTTAGAACGTGTGTATA TCTATAGTTGTTAGAATTGTGCATTAAAGATTTGATTTATGATTTATGCCCTTTTTCCTATCATTTGTTGAATCACAGTT GGCTTTGAATTTTGCCTGTATTGCACAAATCAGTGCAAATTTTTCCATCAATGCGGATGGTCCTGCCATCGGGTATCAAC CCAACAAATTTTATTTTTATTTTTTGCTTTTTTCCTCCCACCAATCCTCATCTGAGAATTGGAAAGGAAAGAGTGACATG CAGTGTTAAATAAAAGGGGCATTACATTTTGTACCATGCTGCTTGCTCTGTTTTTCTTTCGGAAGGGGGGATGCCTACTT GTTCACATTTGCAGACCTGTCACTAAACTTACACTGTTTGCTTCTTCGTGTACTGGATGCACATTTTATTCTTCTGGTTT TGGGTGTTCACAGTCACTCTCAAATGGTTTGAAGTTCTGATTTTAAAACATTTGTGACATGATTCATGATGATTTTAGAA ATATTAATATAAAACCATTCATGTGTCTAAAAGAAACATGAATTAATATATATTGTTTTTTTTTTGTGTGGATGGAATTA TGGTACTTATTGAGTTTATTATTTCCTTAGTGGCATCTAATATTTAAATGTTTATTTGAGTTTTTTTAGTATTGTATTCA GATTTGGCTTCACTAACGTGAGAGAGGGCCGACTTTGAAGGATAAAGTGCAAAATTATAATTGTTGATCGGAAAAATCAA TGGTTGAAATTTGTAAAATTTCACAGTTAGCATATATGTATATGTATTTAGTCACAATCTCGAAAGTGTACATTATTCTC TAAAGAGCACCCATTTCTTTAGAGGAGTCCAAACCATTTTGTTCACGTTTTTGGTGTGGAGTGATGTATATTTGAGTTTT TTTATTTATTGATGCTTTTCTAAAAAGCTGGACAAATAATGTTTTTTTTTAGGTAGACACATGATTCTTGATATGCTTTA CGATTTGTTAACTAGTTTGTATCAACAACAGAAAAATTTGGAGGTGGAAGATTCTGTGGTTTTTATTTTGAAATTTTGTA GAATTATGAACTTCTTTTTGAAGAGCGTGTAATTCTTAAAAGTATCTGTAGTTTTCTTACAGAAAAAAAAAGGAATAAAA AGGAATATGCTAATGGCTCTATCTAATTGATATGAACTGTGACTGTTTCATGATGTTTTCTAGTTGTTAATACTTGTAAA TGACAAACCTAGGGCTGAGTTTAGCAGTAAATTGTAATATATCCTACATGTTTTAATAATCATCGTGGCTTGTATCATAC ATTATGCACCTCTTACCCATTTTTCACGGTCAAGCAAAATTCTTACTTTGTTGATTAAGAAAGAAACAAGAACAATTATT CGTGTGAATTTTGATTTTTTCCTATCATTTATTGAACAAAATCTTTATGCTTATTTTATTTCCATTGAAGTTTTATCATC AACATGATAATGGTGCGTCTTGATACTTTTTTTCTGTGCTGGACTTTTTGCTTGATATTATATTTTCTATTATTAGGGAC CTACCATTTCAGCAGAGAATTATTTGCAATTTCTTTTGCATAACATTTTACAGGTCTTATTTGAAGCTAAGCAATGGGAT TATCTAGTTGACCAGTTCAAACAGGAGTTCTGCAAGTTGTATGGCATGACATTAGAGCCATTGCTCAATATCTATCTGCA AGCTGGCCTGTCTGCTCTCAAGACTCCGTATCCCTTAACAACTTGAACTGTAGACTATCATCTGCTAGTACAGTGTTTTA AGCTAAATACCCTATCCTTTGGGGATTGCCATGCTTCATCTCTCTTGCATGCATATGACTGACCCCTGCCCCACACACAC AAAAATGAAAATCTTAAAACCACTTGGACTCTCCTCAATGGGTTGTCTTGGTATCTTAAAATCCTCCATATTTAACAGTT CCAAGACATTCATCATATGATATTTCATTTTACATTTGGCAATGCTAACCTTGTCTTTTGACCCTTTATGTAGCAATTCA TGATATTCGTAGTAGTTTATTTTATGGTACAGCTACTACAGTATACAAATCATATTTTTCTTTGGTGACTAAGGTACACT TGATTTTTATATGGTAGTTCTCAAGTTCTTACTGATATGTTATTAGCATTCCTACAATTTTTCCTTGGTATGGCTCCTGC CACCTCAGTGCTTCTCATTTTCATCTTTATGCTAATGAGTATACATTAATGTTCCTTGACTTGATAAAGATATTGTTACG AGGACGATTGCACAAAAGAGGACCCTCTATCGCAGGAGGCTTTCCGCACACTAGCCTTGCCATTACCATATTCAAAGCAG CATCACTCAAAGCTTGTCTGCTACATAACAAAGGAGCTAATGGACACTGAGAACCCACCACAAGTCTTGCCCAACGGATA TGTCTACAGCACTAAGGTCCCTGCTATTCTAAATGTTCTACTATATATATATGCCTATAAAGTATTAGGCTAAGTTCATG TTTTATTGATTTTTTGCAGGCTCTTGAAGAGATGGCTAAGAAGAATAATGGTAGAATCATCTGCCCTAGGTCAGGTGTAG AGTGCAACTACGGGGATCTGATGAAGGCATATATTTCATGA
CDS sequence (LotjaGi5g1v0360500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATGGATTCGCTTCCGAATGGCAACAACACCACCGGAACCCCGATCGCCGCCGGCGCCGGCGCCAATCCCACGGC TCCTCCGTCGTCAAACCTCCCTCAATTGACAGAGTCTCTGAAGTTGGAGCATCAGTTCCTGAGGGTCCCTTTTGAGCACT ACAAGAAGACCATCCGCGCCAATCACCGCGCCGTAGAGAAAGAGATGTCCGCTGTTATCTCCGGCGTCACCGATGCCGCC GCCGCTGACTTTTCCCCCGATGACGCCGTCAACCACCTTAACTCTCTTGTCTCCCGCCTGCAAGGGCTCAAAAGGAAGTT GGAGGAAGGAAGTCTGGCAGAGCATTTGCAAGCTCAGAAGTGTCGAGCCCGTATCGATCATTTAGAGTCTGCTGATGCAG ACAATCTGTCAGAATGGAATAACACTCGCTTGAAGCGGATTCTTGTTGATTACATGTTGAGGATGTCATATTATGACACT GCACAGAAACTCGCCGAATGCAACAACTTGCAGGATCTTGTTGATATTGATGTGTTCCAAGAAGCAAAAAAGGTTATTGA TGCTTTGCAAAATAAGGATGTTGCACCTGCCCTAGCATGGTGTGCTGATAACAAACCAAGGCTGAAGAAGTCTAAGAGCA AATTGGAGTTCCAGTTGAGACTTCAAGAGTTCATAGAATTGGTAAGAGCTGAGAACAACTTGAGAGCCGTCGCATATGCT AGGAAATATCTTGCGCCATGGGGAGCCACCCACATGAAAGAATTGCAGCGAGTCCTCGCAACACTAGCTTTTAGAAGAGA TACTGAATGTGCCACTTATAAGGTCTTATTTGAAGCTAAGCAATGGGATTATCTAGTTGACCAGTTCAAACAGGAGTTCT GCAAGTTGTATGGCATGACATTAGAGCCATTGCTCAATATCTATCTGCAAGCTGGCCTGTCTGCTCTCAAGACTCCATAT TGTTACGAGGACGATTGCACAAAAGAGGACCCTCTATCGCAGGAGGCTTTCCGCACACTAGCCTTGCCATTACCATATTC AAAGCAGCATCACTCAAAGCTTGTCTGCTACATAACAAAGGAGCTAATGGACACTGAGAACCCACCACAAGTCTTGCCCA ACGGATATGTCTACAGCACTAAGGCTCTTGAAGAGATGGCTAAGAAGAATAATGGTAGAATCATCTGCCCTAGGTCAGGT GTAGAGTGCAACTACGGGGATCTGATGAAGGCATATATTTCATGA
Protein sequence (LotjaGi5g1v0360500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMDSLPNGNNTTGTPIAAGAGANPTAPPSSNLPQLTESLKLEHQFLRVPFEHYKKTIRANHRAVEKEMSAVISGVTDAA AADFSPDDAVNHLNSLVSRLQGLKRKLEEGSLAEHLQAQKCRARIDHLESADADNLSEWNNTRLKRILVDYMLRMSYYDT AQKLAECNNLQDLVDIDVFQEAKKVIDALQNKDVAPALAWCADNKPRLKKSKSKLEFQLRLQEFIELVRAENNLRAVAYA RKYLAPWGATHMKELQRVLATLAFRRDTECATYKVLFEAKQWDYLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALKTPY CYEDDCTKEDPLSQEAFRTLALPLPYSKQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGRIICPRSG VECNYGDLMKAYIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 34 | 34 | - | – | |
PANTHER | 27 | 414 | 388 | 2.8E-177 | ||
PANTHER | 27 | 414 | 388 | 2.8E-177 | – | |
ProSiteProfiles | 140 | 172 | 33 | 8.3 | ||
SMART | 178 | 235 | 58 | 1.6E-14 | ||
ProSiteProfiles | 178 | 235 | 58 | 13.725 | ||
Pfam | 179 | 320 | 142 | 6.2E-41 | ||
SMART | 231 | 325 | 95 | 7.3E-25 | ||
ProSiteProfiles | 326 | 399 | 74 | 14.21 | – | |
SUPERFAMILY | 349 | 411 | 63 | 8.65E-6 | – | |
CDD | 352 | 400 | 49 | 1.48616E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Biological process | Negative regulation of gluconeogenesis | Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis. |
Expression pattern of LotjaGi5g1v0360500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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