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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0361100 |
| Transcript ID | LotjaGi5g1v0361100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|O64750|EDA3_ARATH Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic; TrEMBL-Plants: tr|I3SKJ0|I3SKJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0361100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67521940..67525015) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAGAGTGAGAACAGGACGTACGTGGAGGGCACCGGACCTATCCACTCGATTTTCTTACTTTCTCTTCATCTTCTCCA GACTCCAGAGCAAGCAAGCAACACCCCATTGAATCGCAGTAGATAAGCTTGAATTCATGGCGTCTCTGATACCTCAATGC CTTCCTCCATCTGTAAACCGACGTAAGAACTACTTAATTAACACCTTCCTAACATTCTCTTCAATCATTTCATTATTCAA TCGTTCTTCTGTTCTGTTGTGTTGTTTTCAGAAAAGGTTCATGTTGTCAAGTCAAGTCACCAAAACGAGAGCTCTGCTTC AAACCACTCCCCAAAGGTGCACAAACACATCCTGCAACTTTTTATTTATTTATTTATTTATTTATTTATTTATTATTCAT TGATTTTAAATACAACTGTTGATAATGTAATGTAACTACTCGTAATTGAATGCTCTTAGCTCGTTTGGAGAGCTTATCTT ATAGAATGAAGAGGTTTTGTAAATAGCTTATGACCAATCTATAAGTTATTTTGAACTTATTTTCATAGGCGGTTAAGATT AACTTATGAATAAGAGCGTATGCTTATTTATAACTTATTTTCAGATTATTTTAAAAAGTTTATCACTGTCAAAGAAACAA AGAGCACCTTGGTTTATTGAGAAATGAGAATAAGCTATCAATGAAGCATAGCTATGATTTTTTGACTAATGAGCTCCGGT AAACATGTGCCATAAATTGTATATTATTTCACTAACATGTGCATAGCCAACATCTCCCAACCATAAATCTCAAAGTTATT CAAAGACTTGTTCCCTGATTGCTGTTTGGTAGTTTATGTGTGCAACGGCAAAATGTCAATTACCTACTGAAAGTTCATCC TCTCGTGCAGGAGCTCCGAGTAATACCAGTTTCCAGGCGTCAGTGTCTCACATGTTTATGTTCAACTCTAGCTTTGATTG GTGATTATGCCAGACCTGTTTCTGTACCGGAAGCAGCCGCTGCTGATGGGATGGAAAGACCAGGCTGCAGAAATTGCGGG GGAAGTGGGGCTGTGTTGTGTAAGTTCTGATAAAACTGCTTTCTTTGAGGTTGTCTCTTCTTCACTGCATGATTTCAAAT ATATGCTTAATAGTTCACACATAAATCTTCTGAGAAAAGAGTCGTATTAAAATTCCCATGATTATAAATCTTGGCAGTCC TTCTTTCCTTAAGAGGGTGAGCCTTCTTACTACTGTGAGGAATATTATAGTGATTCCCACAACTATTAGCAAATCAAATT ACTGAGATGATTTTATCATTAGAGAGCTTTGCTAGTGTATAATGCTTCAAGACTCCTGACTAAGTCCCCTGGTTAAATAA TACCGAATTAAACCAAGGCAGAGTAGAAAATATATAATGTGATTGATTTGTTAGTTCAGTTAAGAATAAGATTGTTTCCA TATAATATAATTCTTCATACCATGTTTGGAAAATTTTATCAATATGAAACCAGTAGATCTGACTTTTCATTTAGAGTATT TAAGAGAAGATAATTATTTACCAGCTCCTGTTTCTTACATGCTTTGATCCATATGATGTTTACTTTTCATGTAGGTGATA TGTGCGGTGGTACAGGAAAATGGAAAGCTCTAAACAGGAAGCGAGCAAAAGATGTTTATGAGTTTACAGAGTGTCCAAAT TGTTATGGTATGAGATTTAGCCTTTTATGACATGCTTTCCAAAGTGTTGTTATGCAATACAGTTGTTTTTTTTATAGAAT TGATGGCTCCAAATTCATTTTTCTTAGTTAAGTATGCCAATTACACCTCTTATTGTTCTTTTGAACACGAACACTTCTTT GTTTGTTGCTCTTGTACTGTGTTATGACGTTTTTGAGTGGACGGTAAGGGAGGGAAAGGAAAAGTAAGAGGGAGACTGAA ATGATCAGAATAAGGAAATGAGAGGAACTATCATCCTGTTCTATAGGGTTTCAAGTATAGGGATTGGCCTTTCCTCTCCT CAAACACCTATTAAACCAATGTGTGGTTCTCTTTTCTCATCTCTTCCCAACTACCTGTTTATAAGGTTTAAAATTGCAAT TGCGTTTTATCACAGACTTTAAACAGAAAATTGAGGACAAATGCAGGCGATGAGCTCGCGATAAAGTTGCAGTGAGCCAT AAAAAACTTTGACAATGCAACCACAATATTTAACTTTTCCTGTTTACCTTATCGAAAAATAGCCTTTTTAGTATTTCCAT CTGCAACTAACATTCATAAATTACAGGTCGAGGGAAGCTTGTCTGCCCTGTTTGTTTAGGAACTGGTGTGCCGAACAATA AAGGTCTTCTGAGGAGGCCTGATGCCCAGAAACTGCTTGATAAGATGTATAATGGAAGGCTACTTCCCAACTCTTAGATA GTAGGTATGTTTTCTTTTATTATGCTACTCCATAGTCCATAAAGTTACTGGTGCCTAGAATATTGATCTTGTATTGCCAT TATTCACTGTACAAGATCCTTTTCAGTCATACGTGTGACGGTGTGAGCACAACTGAGGCTTGCTCTTACTGCATTTTGGC ACATGACTGGAATGTTCAATAGTTAACAAAGCCAATGGCTGCAATGGTAATCGACTAGCACAGAGAACATGCGGAAGATT TTCTTGCTTATATTTTTTAGTCTGGATGCTTTCCAGAGCACCAACAACTATTGGCTTGGTTATCACGAAATGACTTCCAT GGTTCTATATGAAAAAAGTCCATTTTTCAATGCTACAGTCGTCTTATTCATGCAGACCGAATCAACTTCCAAAATGCCTT GTATTGAAGATATTGGGCAAGTACTTTCTGCAAGAGTTGCTATTTAAGCTCCTAATTAGTAATTAGTTACCATTTACCAA GTAAATTTACATATGTTCTTACAACTCACTGTGTAATAAGCCAATTCGAGCTATTTGAAATTCATTATTTTTAATTTCAA AACAAAAATCATTATTTTAAATAATTAAACATGATGAATGCTTTGTTTGCTGATCTTCTCTGGCTTGTGACGATGGCAGT AAACGAGCCCGAGATTTTTTGTTTATTGCGTTAGAG
CDS sequence (LotjaGi5g1v0361100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTCTGATACCTCAATGCCTTCCTCCATCTGTAAACCGACAAAAGGTTCATGTTGTCAAGTCAAGTCACCAAAA CGAGAGCTCTGCTTCAAACCACTCCCCAAAGGAGCTCCGAGTAATACCAGTTTCCAGGCGTCAGTGTCTCACATGTTTAT GTTCAACTCTAGCTTTGATTGGTGATTATGCCAGACCTGTTTCTGTACCGGAAGCAGCCGCTGCTGATGGGATGGAAAGA CCAGGCTGCAGAAATTGCGGGGGAAGTGGGGCTGTGTTGTGTGATATGTGCGGTGGTACAGGAAAATGGAAAGCTCTAAA CAGGAAGCGAGCAAAAGATGTTTATGAGTTTACAGAGTGTCCAAATTGTTATGGTCGAGGGAAGCTTGTCTGCCCTGTTT GTTTAGGAACTGGTGTGCCGAACAATAAAGGTCTTCTGAGGAGGCCTGATGCCCAGAAACTGCTTGATAAGATGTATAAT GGAAGGCTACTTCCCAACTCTTAG
Protein sequence (LotjaGi5g1v0361100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLIPQCLPPSVNRQKVHVVKSSHQNESSASNHSPKELRVIPVSRRQCLTCLCSTLALIGDYARPVSVPEAAAADGMER PGCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGVPNNKGLLRRPDAQKLLDKMYN GRLLPNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 167 | 152 | 1.1E-77 | – | |
| PANTHER | 16 | 167 | 152 | 1.1E-77 | – | |
| SUPERFAMILY | 82 | 139 | 58 | 8.11E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0361100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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