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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0361600 |
| Transcript ID | LotjaGi5g1v0361600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT3G12620.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38; TrEMBL-Plants: tr|A0A0B2RW90|A0A0B2RW90_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0361600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67560504..67563379) extracted from Lotus japonicus Gifu genome v1.2.
GACATGGTATCAGCTACAATTAGGCGAATTGTTTCACCCTGTTGGAGACCATTTGATGATGATAGTGGAAGTTCTAGTAG GAACGGGGATGCAAGTGGACGTTTTGATGGTTTGTTGTGGTATAAAGATTCAGGAAGACACGCGAGTGGTGAATTCTCAA TGGCGGTTGTTCAAGCAAACAATTTGTTGGAGGATCACAGCCAACTTGAATCAGGTCCCATGAGCTCACATGTAGGAAGT CCTCAAGGAACTTTTGTTGGTGTATATGATGGGCATGGAGGTCCAGAAGCCTCTCGGTTTATCAATGACCGTCTATATAA AAATATCAAGAGTAAGTTGTTATTCTTTCTTCACCCTGCAACATGCATAGTTTTGCTATTGGGTTTTCTTTTCACACTTC AAGGGCAGAATTATTGTTTAAGCAGATAGATTGCTCTTTGTTCTCATCATCATAATTTTATCACAATTTTGAATTCGTGT TGTTTTACAGAAATGTCTTCCTTAAATTAGAGTTTTTTCCCTTTTTTCCCACTAGTAAGGATCATGTCCCACTTAAAAAA GATCATAGTTAGTGGATTTATTGAAATTTAGATTTTTGATATCATTCAATCACTATAACTGACCAGTTAATGGGATAAGG TTTGGGGTAGTATTTGGTTGATGGAATGATAATAACCTTGTAAAACAATTAATTGGATCTTTTGATTCTTTACTTCGCAG TTCGCATCTTTCTGAAAGCACATTTTTTATGGTATGCTTGTTATTGTCTATTGCTCAAGATATTTATGGTATTTGAAATT TTTAATCTTTTGATTCTTTTTTCTTAATGCAGAATTCACTTCAGAAAATCAGGGAATGTCATCTGATGTTATCAATAAAG CATTCATGGCAACAGAAGAAGAATTTCTTTCTCTGGTAAAGAAGCAGTGGCTACTCAAGCCACAGTTAGCATCGGTTGGA TCTTGCTGTTTGGTAGGCATAATATATAGTGGGGAGCTCTATGTTGCAAATTCAGGAGATTCTCGTGCAGTTTTAGGTAG AATGGATGAGGCTACAAAAGAGATTAAAGCAGTTCAATTATCCTATGAGCACAATGCTAGCTTTGAATCTGTCAGAGACG AGTTACGCTCATTGCACCCTCATGATCCGCAGATTGTTGTGATGAAACACAAGGTCTGGCGTGTGAAGGGTCTGATTCAG GTGATTTTTAGAACCTTCATCTCAAGTTTCATATTCTCTGTTCATGTAAGACACAAATCCCAGAGGATTTGGGTTCCATG CAGTCACGGCTCATACATTCACGTAGTCAAGGAATCTAAACCGTACAATTAAGAATGGTCAGCTCATTATTTCATCAAGA TCGGACGACAGAGATAAGCTTAAAATTTGAGTTGTCCGTTTTTTGATTGAACAAGTCAGATTCCTTGTTGTGTGAATTTA GAAATTCCCTGAACTCAGGGAAATGTCATAGGATATAGTTATATGAATAATACTCATGAATATGTTAGTAGTTTGAATGA GTGTATGATGATTGTGGCTCTAGAGTTATTATTGGCCTAGTTTCTTTATTCCCCCCCCCCCCCCCCCTCTCTCTCTTTCT TTGATTGTATTTGTGTTACTAAAGCTTTCTTTGAAAATTCCCTGCAAGTACATTGAAAGGAACTTTAGTGTTGCATGTTT GCTCCCAGGAAACTTTTATAGGAACTAACTTGTGATTTACTTGTAAATCTTATTATATATGTTCTTCTATGCAAAGAAAA TTAAGGGCACAGCCAGGTTGATGAAGCTGAAAAGTTTTATTGACCAGATTGTTCATTTGCATTGTAGGTTTCAAGATCCC TTGGTGACGCCTATCTAAAGAAGGCGGAGTTTAACAAAGAACCACTACTGTCAAAATTTCGACTCCCAGAACCGTTTGAA CAGCCAATCCTTAAGGCTGAACCAACAGTCCTAGTGCATAAACTCCATCCTCAAGATCAATTTCTTATATTTGCATCCGA TGGATTATGGGAGCACATGAGCAATCAAGAAGCAGTTGATCTTGTCCAGAGCTGTCCACGTAATGTAGGATTCTATTTCA GATGAGCTTGTTTTGCATTTCTGTCAGCTCTCATGTTATTTCTGCATCTACAAAAACCTCTTCTAATATATTTTTAATGT TCATTTAGTGCATGTTTGATTATCTGTTAGCATGTGTTTGTATGCTAATATCCGTTTGCACAGGTGCCAACATATATCCA AACATAGTATTAGAGTGTTTTTACTGAAGAATTTTTTTGTTGGATTGGCTTTGAAAGTTAATTTTACTACTTTTCCATTG AATGGAAAGGATATACAAACATGCACTAGAACATTGTATCAATTTTACATGGTTGATCTAGGGGGTCTGGATCTTCTACG GTGAAATCATCACTGGTGAAAGATCTTCCAATTTTTTTTTTAATTTTTCTGAACATATTTTGGACGGTCGATATCATGTT ATTGGAGAGGATATAGCTCACTGATCTAAGTGTAATTATTTGTATGAACCCCTTTTGGAACATATGATTCTGATTACTGT GTACACGTGCAGGGAGTAGCCAAGAAACTTGTCAAAGCTGCAATTTGTGAAGCTGCGAAGAAAAGAGAAATGAGATACTC AGACTTGCAAAAGATTGAACGTGGGGTGAGGAGACATTTCCATGATGACATCACGGTTATAGTTTTGTATCTCGATTCAC ATCTAATTAGCCATTGTAATTCACGTTGTCCCACCATTTCTATCAAAGGAGGTGGTGATTTTGGTTTGAATACTTAGTGC ATATTTGGAAATTCTTGTACAATTGATTCTAAAGGAAAAATTAATTCTGGCAGAAGCTTCTGTAAGTAGCTTATGA
CDS sequence (LotjaGi5g1v0361600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATCAGCTACAATTAGGCGAATTGTTTCACCCTGTTGGAGACCATTTGATGATGATAGTGGAAGTTCTAGTAGGAA CGGGGATGCAAGTGGACGTTTTGATGGTTTGTTGTGGTATAAAGATTCAGGAAGACACGCGAGTGGTGAATTCTCAATGG CGGTTGTTCAAGCAAACAATTTGTTGGAGGATCACAGCCAACTTGAATCAGGTCCCATGAGCTCACATGTAGGAAGTCCT CAAGGAACTTTTGTTGGTGTATATGATGGGCATGGAGGTCCAGAAGCCTCTCGGTTTATCAATGACCGTCTATATAAAAA TATCAAGAAATTCACTTCAGAAAATCAGGGAATGTCATCTGATGTTATCAATAAAGCATTCATGGCAACAGAAGAAGAAT TTCTTTCTCTGGTAAAGAAGCAGTGGCTACTCAAGCCACAGTTAGCATCGGTTGGATCTTGCTGTTTGGTAGGCATAATA TATAGTGGGGAGCTCTATGTTGCAAATTCAGGAGATTCTCGTGCAGTTTTAGGTAGAATGGATGAGGCTACAAAAGAGAT TAAAGCAGTTCAATTATCCTATGAGCACAATGCTAGCTTTGAATCTGTCAGAGACGAGTTACGCTCATTGCACCCTCATG ATCCGCAGATTGTTGTGATGAAACACAAGGTCTGGCGTGTGAAGGGTCTGATTCAGGTTTCAAGATCCCTTGGTGACGCC TATCTAAAGAAGGCGGAGTTTAACAAAGAACCACTACTGTCAAAATTTCGACTCCCAGAACCGTTTGAACAGCCAATCCT TAAGGCTGAACCAACAGTCCTAGTGCATAAACTCCATCCTCAAGATCAATTTCTTATATTTGCATCCGATGGATTATGGG AGCACATGAGCAATCAAGAAGCAGTTGATCTTGTCCAGAGCTGTCCACGTAATGGAGTAGCCAAGAAACTTGTCAAAGCT GCAATTTGTGAAGCTGCGAAGAAAAGAGAAATGAGATACTCAGACTTGCAAAAGATTGAACGTGGGGTGAGGAGACATTT CCATGATGACATCACGGTTATAGTTTTGTATCTCGATTCACATCTAATTAGCCATTGTAATTCACGTTGTCCCACCATTT CTATCAAAGGAGGAAAAATTAATTCTGGCAGAAGCTTCTGTAAGTAG
Protein sequence (LotjaGi5g1v0361600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSATIRRIVSPCWRPFDDDSGSSSRNGDASGRFDGLLWYKDSGRHASGEFSMAVVQANNLLEDHSQLESGPMSSHVGSP QGTFVGVYDGHGGPEASRFINDRLYKNIKKFTSENQGMSSDVINKAFMATEEEFLSLVKKQWLLKPQLASVGSCCLVGII YSGELYVANSGDSRAVLGRMDEATKEIKAVQLSYEHNASFESVRDELRSLHPHDPQIVVMKHKVWRVKGLIQVSRSLGDA YLKKAEFNKEPLLSKFRLPEPFEQPILKAEPTVLVHKLHPQDQFLIFASDGLWEHMSNQEAVDLVQSCPRNGVAKKLVKA AICEAAKKREMRYSDLQKIERGVRRHFHDDITVIVLYLDSHLISHCNSRCPTISIKGGKINSGRSFCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 3 | 356 | 354 | 1.9E-72 | ||
| PANTHER | 19 | 379 | 361 | 1.3E-170 | – | |
| PANTHER | 19 | 379 | 361 | 1.3E-170 | ||
| Gene3D | 40 | 368 | 329 | 3.5E-84 | ||
| ProSiteProfiles | 47 | 358 | 312 | 42.26 | ||
| CDD | 51 | 358 | 308 | 2.12918E-67 | ||
| Pfam | 71 | 326 | 256 | 4.6E-44 | ||
| SUPERFAMILY | 77 | 359 | 283 | 1.26E-56 | ||
| ProSitePatterns | 84 | 92 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi5g1v0361600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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