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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0361800 |
| Transcript ID | LotjaGi5g1v0361800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TAIR: AT2G39290.1 phosphatidylglycerolphosphate synthase 1; Swiss-Prot: sp|O80952|PGPS1_ARATH CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic; TrEMBL-Plants: tr|I3SDB6|I3SDB6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0361800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67567483..67572355) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCCAGAAATATCCGTCACATTTGGCAGAACCGAAGAACATAGAAAGAAGAAGAAGAAGAAAGTGGCGTTCAGCTCAG TTCGGTTTTTCCGATGTCGACCCTGAAACTAAGCACCACTGCTGCTTCTATCTATGTCCGCTCAGCCACCACCAAATCCA AAACCCTCTTCTTCTCCCCAAACAGAACAACAACCATTCACGACCACCGCAGAACCACCCACGTGCCTCCCCTTTCCCCT AAACCACTCATAGGGTTCACTATTTGCAAAACCCCGTCGAGCTTTCTCACAAGGGCAGTCAGTTCCACAGTACCACCACA ACCACACCCACCAGAGCCAGAGCCAGAGCCAGAGCCTTCCAAATTGCTTACCTTGCCCACAATTTTGACCCTTGGCCGTG TCGCCGCCGTGCCGCTTCTTGTTGCTAGTACGTTCATTTTTCACATTCTATTGTGTAGTTCTGATTAGTTATGGCATATA CAAACACCATGACATTGGTTTTCTGATATCTTATCTTTATATGTAGCTTTCTATATGGATGGTTGGCGTGGAACAGCAGC TACTACAAGTATTTTCATCGCTGCTTCCGTTACCGATTGGCTTGATGGCTATATTGCTCGCAAGGTACTCACTCAAACTG AATTCAAACACCTACCCGACATTTTTTTTTCATTGTTCCATGTTTGAGAATGATGTTTATCACTTGTCTTTTCTTTATTT GCAATGCAGATGAAGTTAAAATCTTCATTTGGCGCATTCTTAGATCCTGTAGCGGACAAGGTACTCTTTGGCCTACTTGA TGCTTATTGCTTACATACAAGAGTCTCTAAGTAATAACATGTTTGGATTAGCTTATTTTTTCTCAGAATCAATTTTGTCA CCCATATACTTCTCTCACAATTGATTTTGGCTTTACAATAAATTGTAGAATGATTTGCAAACATAGTATAAGTGACATGT CAAAACCATGCTTTAGTTATTTTCTGGAAGTGAATGATTTTCTATTGAATGCAGCTTATGGTTGCTGCGACATTGGTTTT ATTATGTACTAGACCTTTGGCTGTTGATGTTTTTGGACAAGCACCCTGGCTACTGACTCTCCCTTCGATTGCCATAATTG GTAGAGAGGTAATGTTCACTTAACCTTTTGCATCTGTGATTTCTATGGCATGCATTACTTAAAAGGTATTTGTTCACAGG GAACCTTATAAAGGGTCCTTCATTTCTCTGCCAAAATCATGCATCTTCATTGTTATGGATTCCTTATCCCTTCTCTCTGC TGTTATTTATTCTATGATGTTCAATTTGTAATGTGTCAATTGGCTCTTATTACATGAACTTGTCAAGACAGTGAATCTGA AGTTTCTTATAGCTGCCACAGAGTCAGAAATACCAATGATCATATTTTTCACATCATATAATGAACTGAACCTAGGTAAA GACAGGCTAAATAGCCAGTTTTCCCAAAAAGTAAAAACCATGCAAATGCAGTTGTTCATATATGAGTGTGAATGTCCTTT TAATGTGTGTGAAAGGAGAATTCAAATTTGGGATATCCTGTGGTTGACCTACTCTTCTGACCTATATAGCTTTGGAGGTG GACACTGTAATGGTCTAATTATGTCGAATATTGCTATCATGCATATTTACATACTTGTACATGCTTTGGAATGTTGATGA TGTATCACTAAACAAAAAACATACTTGTATATGGTAAAGGAACCCTACTTTAATCTGTCTTTCCTTGTCTGAGTTACTGG CTTTGTAGTTTGTACTAGTGATCAAATCAGGTGTCTTATAGTTTTATCTTGTGACCTGCAAAATAGATAACCATGTCTGC AGTGAGAGAATGGGCTGCTTCGCAGGATAGTAAGCTCTTAGAGGTTGGTTTTACCTTTTATACCTGAATCACCTACTTGG TATTAGCGCACAGTTATGACCTTATATCATGAAACTTTGAATAATAGGCTGTTGCTGTAAATAATTTGGGGAAGTGGAAA ACAGCCTCACAGATGACAGCATTAACCATCCTCCTTGCGACCCGGGACTGCAGGTATTCATCTTCTTTGTATTTAGCGGA TGCTGTACTATTATCATTAGAATTTTTATGAAAAGGAAAGTTATATGCAAAAGTCATCTCTAGATGGGCTTATATTCGAG TTAACCTTTTGCTAATATCTTACTCTCAACTTTAGATATGCAATGCTTAGTCATATTTGCTTAGAGAAAGTTTCTTTGGG TGTGATTCTGAAGTTGTGTTCATTGTAAATTAAGTTACATGTTAAGTATTTATTTTGGCCCCCTCAATTTTAGTTCAAGC TCTGTTACCGTCTGATTGGGTCTTCTCGGTGTTTTCCCATTTTTTTCTTTTCAGTAATGGAGTAGCTGCCGTTGTAGCAG GGTCTGGTGTTGTTTTGCTTTATACTTCAGCAGGGCTTGCCATATGGTCGTTGGTTATATATATGAGGAAAATATGGAAG GTATTGCTGAGGTAGCGTGCTTGGTGCTCCATGTATTCACATACATCCATTTTTTTTGGGGGAGCTTCAATTCTCCCTAA CATTTCTGTGTAAATGTAAATCTTAATTCTGCGCAATTTCCAACTCCACACAGCGCCATTTCTCCTATTCCTGAAAATTA CTTGCTCACATTTTTGTCCTCAGTTACCTTGGTAAGAAAAAACAAAATAAGAAAGATCACTAGCCATGGCTAAACGTTAG AGCATTGATTTTGTTTTTGGCCCTAACTGCATTCTGGAGTCGTTGAAGGTTTGAGACCAGAGAAAATTCACAGGAGGAAC TTATGTATGATTGTAGCTGACTTCCGGTATATTATTTGACATGTACAAAACATAAGTTAAATATGAATGTTTGAGTTACC CGCATGGTTAATGTATACTGCTATGGTTAATGTAAACTGCTATTTTACTTGTGCTCTTGTAAGTTGTAACTACTGTGTGA GCAGAAAGAGTTGATTCAGTATGATTTTTGCACTTCACTTGTAATTTAGGGTTTTATGATCTGGTATATAGTACGAAATG TTGATGGAACAGAAAATGTGGAAGTGAGCATCTGGAAGAACTCGACATGGACCCTTGTTGAACTCAACATAGCAATTTCT TCTATGCCGGTATCTTGAGATGTGATGCGCTTGCATTAACTCAAATAAAATACACTTATTTGATGGACTTCAGTACTATT ACAAAAACATTAACAATGTACTTGGCTCTATTATAAAATTAGGTTCAAGATAATGAATAATGGCCATGCAAGTCACAATG ACATCTTCACCTATCTGCATCAGTGGTTTATTATCTCGCATTAGCTGGATGATTATCTAGAGGTGGAAAGGAACCCCGTT CTGTGAAGATAGTGGAATTGACACTGGCTTTCTGTTTCTGATCAAATCGTGGCACTCTTTGTTCGAGCTGTGATGCCAAA TTTTAGACTCATGGATTGCCCTATAGATAAGAACTGATCAATAAAAACACAGCAATTGTGAATTTAAATGAAGTAGGTGT TTAGTAAAGTCCAGTCTTATGGTACCAGGAAGCGCTTCTTGTAGCTTTCAACCAGCTCCTTCGGATCAGAACGAGTTACT TTGTAGCCATCAATGTTATTCATTCCCTGTAGCAATAATATAACTTCAATTCTTGAATGCAGCTTAGAAAACAAATTATG CAGGCCATGCTGAACTTGTAACATCATAGGCACATGTAGAGATACATGCATGAGTAAATAGAGAAGATTGTTATTCTATG ACCTACATCAATCCACGCTGCCAGTTTAGGCCTTCCGCTTTTAATATCATAATTTTTCACTTCCATTAAAAATAATTGAA ATCTTTCAATGAAAGGAGCATATGCTATATCCACCTGAAATTTACAGAAAATTTTGAACAGTTCAAATCATTGTGAAGAT GGACAAGAGTACACTGTGCATTGTCTTTGCTATAAAGGAAGATAAGCATACTCACAAGACTGAATTGGCCAAGGAAGAAA GGCCCCTGATCATATTTGGAGAGAACAGTTTCGAGGTAATCAAATGCGGTCCCTAAAGTAATGTAAGGTGCTGAGTGATG TTACATAAACATAAAATCTTTAACAAAGAGCTCACATATCTTACCATTCATTCTTTCATCAATGGATCTCAGTGTCACTC TCTTTCTTAGTATTTAACATTTCTCTTAGATACCTTTTAATATGTTTGTTTCAAAAGCCATAATCACTTCTAAGCAGAAG CAGAAGAAGCTAGCTTCTGGGAGCAGAAGCTACTGAATTATCGTGCTTTGAATTTGAATTGTGTGCCACGACCAATACAA ACACACTCTATACCACTATATATAAAACAACATCAAGAAAGCAAGTTCATCTTAATCTTACCAGCTTCAGTCACATCTTC TTTAAATGAAGATATAACTGTCTTGTAAAATGTACCAGCATAAGATATCAATTCTTCAGCAAACTCCTCATCATCAGGTC CCTGAGTTATTTATTAAACAGTTAACTTTTAGTCTAAAATTTGCTCCTGAAATAATTATCAAAAGTAAAGAAAAACAAAT CACATCTTACACTTGGGAAAAGGGAGGGCCCTTCAAAGTGAGTATCAATATATTTAATGAGATCGAGACTCTCTCCTCTG ACTTCATTATTGTGTTCAAGGGATGGAACCTGGATTTGGAAATATTATATCGAAACATTACTATTCAGAACGTGGTACAC TAGAGGTTTTTCACGATAAATAAATGGCTTGGTTTTGGCGCAAAGGATAAGTATATCATATGACCTTGTTAGGTGGGTAG ACTTTCTCCTTATACCAGGAAGGCCTATCTTGTAGATCAATAGGAACCAATTCTATCTGGTTCTGCAATCCCT
CDS sequence (LotjaGi5g1v0361800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGACCCTGAAACTAAGCACCACTGCTGCTTCTATCTATGTCCGCTCAGCCACCACCAAATCCAAAACCCTCTTCTT CTCCCCAAACAGAACAACAACCATTCACGACCACCGCAGAACCACCCACGTGCCTCCCCTTTCCCCTAAACCACTCATAG GGTTCACTATTTGCAAAACCCCGTCGAGCTTTCTCACAAGGGCAGTCAGTTCCACAGTACCACCACAACCACACCCACCA GAGCCAGAGCCAGAGCCAGAGCCTTCCAAATTGCTTACCTTGCCCACAATTTTGACCCTTGGCCGTGTCGCCGCCGTGCC GCTTCTTGTTGCTACTTTCTATATGGATGGTTGGCGTGGAACAGCAGCTACTACAAGTATTTTCATCGCTGCTTCCGTTA CCGATTGGCTTGATGGCTATATTGCTCGCAAGATGAAGTTAAAATCTTCATTTGGCGCATTCTTAGATCCTGTAGCGGAC AAGCTTATGGTTGCTGCGACATTGGTTTTATTATGTACTAGACCTTTGGCTGTTGATGTTTTTGGACAAGCACCCTGGCT ACTGACTCTCCCTTCGATTGCCATAATTGGTAGAGAGATAACCATGTCTGCAGTGAGAGAATGGGCTGCTTCGCAGGATA GTAAGCTCTTAGAGGCTGTTGCTGTAAATAATTTGGGGAAGTGGAAAACAGCCTCACAGATGACAGCATTAACCATCCTC CTTGCGACCCGGGACTGCAGTAATGGAGTAGCTGCCGTTGTAGCAGGGTCTGGTGTTGTTTTGCTTTATACTTCAGCAGG GCTTGCCATATGGTCGTTGGTTATATATATGAGGAAAATATGGAAGGTATTGCTGAGGTAG
Protein sequence (LotjaGi5g1v0361800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTLKLSTTAASIYVRSATTKSKTLFFSPNRTTTIHDHRRTTHVPPLSPKPLIGFTICKTPSSFLTRAVSSTVPPQPHPP EPEPEPEPSKLLTLPTILTLGRVAAVPLLVATFYMDGWRGTAATTSIFIAASVTDWLDGYIARKMKLKSSFGAFLDPVAD KLMVAATLVLLCTRPLAVDVFGQAPWLLTLPSIAIIGREITMSAVREWAASQDSKLLEAVAVNNLGKWKTASQMTALTIL LATRDCSNGVAAVVAGSGVVLLYTSAGLAIWSLVIYMRKIWKVLLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 90 | 90 | - | – | |
| MobiDBLite | 68 | 89 | 22 | - | – | |
| MobiDBLite | 73 | 89 | 17 | - | – | |
| PANTHER | 77 | 284 | 208 | 1.3E-115 | – | |
| PANTHER | 77 | 284 | 208 | 1.3E-115 | – | |
| Gene3D | 90 | 278 | 189 | 1.1E-10 | ||
| Phobius | 91 | 115 | 25 | - | – | |
| TIGRFAM | 93 | 284 | 192 | 1.7E-40 | ||
| Pfam | 94 | 160 | 67 | 1.1E-13 | ||
| Phobius | 116 | 120 | 5 | - | – | |
| Phobius | 121 | 141 | 21 | - | – | |
| ProSitePatterns | 138 | 160 | 23 | - | ||
| Phobius | 142 | 161 | 20 | - | – | |
| Phobius | 162 | 182 | 21 | - | – | |
| Phobius | 183 | 249 | 67 | - | – | |
| Phobius | 250 | 276 | 27 | - | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| Phobius | 277 | 286 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity | Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H(+). | ||
| Biological process | Phospholipid biosynthetic process | The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Phosphotransferase activity, for other substituted phosphate groups | Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor). |
Expression pattern of LotjaGi5g1v0361800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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