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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0363400 |
| Transcript ID | LotjaGi5g1v0363400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | INO80 complex subunit D; TAIR: AT1G05860.1 INO80 complex subunit D-like protein; Swiss-Prot: sp|Q54J07|IN80D_DICDI INO80 complex subunit D; TrEMBL-Plants: tr|A0A067L341|A0A067L341_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0363400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67738890..67743691) extracted from Lotus japonicus Gifu genome v1.2.
ACTTGCTTCTTCTTGATAGAGATATTAAGCTTCAAAAGCATGAAAATCTGGTTGTGTGGAGGCCCCCCCAAGGTGGTATC TTGAAATCAAATACAACCAAAGTTGCAAGGCAGCTTGTGGAGGTTTATTAAGAGATCACCTAGGTCAAGGTTATTAAAGG GTTCTATTCTACTGCAACTTCGGGACCAATACTTCCCTAAGGACATAATTACGAGGGATTTTAAAAGGGTTGAGGCTTGC CCCGTGCTTTATCTCAACAAAGGCTTCAAGTGGAGATGGATTCCAAGATTGCTCATGGTCTCATCATAGTGAAGTGTCTA GGGAATCACCCTGGCACTGATCTTGTTAGAGACATTGTGTAGTTGGCCAACTCAAATTGAGAGATGTTTTTCCATCTTGT CTATCGCGAGGCAAATAGATGTGCTCATAGCTAAATCTTGGTTATGAAGTGCAGAATGTCTATTTTAATTGTGAAAACAC TCCATTTCCCCAGCTAGATTATCCTAGGAATGATGTTGCTGGGTTATTTTTATGCGGATTAATTTAGTTTCCTGGGCTTT TATCCTCCCTTCTATAAAAAAATGTGAAAGATGGACTTGATTATGTGAATTGAAAAAATTGAGGGACCAATTCTCAGAAA ATTATTAGGAACCTAAATCACACATGAATTGTATGATAGAGATTAAAAGTCCAATTGGACTAATAAGTCATTTAAAAAAA AATAAAATTATAAATTTTCTTACTTATTATTTACCATAAACTCAATTGATTTAGCTTTCTTGACACTTGCAATTATTAAA CTCAATCCACATTGTTTTGGTTTTCCAACCTCACCCCTATAAAAAAGGAAAAGATTGAGAAGAAATGGGGGTAAAGCTGG AAAGGAAAATCGATGAAGAAACATAGACAAACATTTCCATACAATATTTAAAGATGAGTTTATATATATTCCTACAGTTG TATGTTTCATGCCTTGCCGGCCCTGCTGCTGCCTTCGTGTCTGTGCGGCGCCAATTCAACCTCAATGGACCCAAATCCCA CCTCGGAATCCTCGGCGGCGCCGCCACTGTCGAGTGCCACCCACCTGACTCGCTGTGAGCTCCTTCGGCGTCGTTTGCAG AACCTGAACCTCCTTTCGAGGCACTACAGAGACCTCTACTGGACTCTCATTCACCACCTCTTCACTCTTTACACCACTCA GTATCCCTTCTCCCCTTTCGAAGATGACTCAATTCCCCAACCTCAGCCCCAACCCTGTGCTTTTCAGGGTTGTCCTTCCA ACGCCATGCCTTTGACCTCCTTCTGCCATCTTCACATCCTTTCTGATCCAAGGCAGCTGCTTTACCAGCCATGCACTTAT GTTATCCAAAGGTACTTAATTGCAACTTTTCTTCTTAATTTCATGCTCAAATGAAATCCAATTATGCTCTTCCTTCAATT TCTGATTGCTTCTTACAATTTTGAGAAACCATATATATGTTATCAGCTGCAAATGATTGATCTGATTCTGTTGGTTTGGG ATAATTTGCTTGTATCGTGTAATTATATATGCAATGTGCATGTCAACGAGTTATGAACTTTAACATGTTTGTATATTTTA TAAGTCATTTATGTTTGTATAGATTCACTGTCATGCTGAATTGTGGTGGATAAGTTGTGTTGTATAAACAGTTGTTAACT TGTTATGTTATGGTTTCCGTACTTCCTTTGATAACAACTGAATTATGGATTCATGTCTCTGATGGGAATGTTTCAACAGA GACATGTCCTGAAAGTTTTAATTGATGGATTCAAAGGACCCAACAGAGTATCGTTATAATCAATTTTAGTGAAATGAGGG AATGCTGATATGCGCAAATAAACTCGTACCATCTTTTGCTGCAATCAATTGCTGATGTGCCCAAGAGCACATATGGTCAA TGCCCTGCAGGGAACAGCAAGACAAGAACATTAAAGGATTATGATCCTATGATTTTGAGTGGAAATGTTTTTCTAATTGT TGGCATGTGTATATGTTTGGATTTTCATAGAACTCAATGACGATTTTTACTTTTCTGCTGATATGTTGGAATGTGTGTTT TTCTGTTTGTGTTAGATGCAAATGAGAAACCAAACTGACACTAAGTGACTTTGTTGTTTCCAGTGCACAAGATGGACGAC CTATAACTTGCATGAAACCTGTAACGAGATCAACTGTTCCACCTCTCTGCCCTGACCACTTTGAAAAGGCTCAGAAGCAT CTCAGCAGGACCTTGAAGATGGCAGGGCTCAATACTCCCTCAACAACTAGAATCGCTCCTAAACTTCATGTCATACTGAC ACAATATGTTCGTCACATTCAAGACAAAAGACTGAAGAATCTGAAGGAAAAGGAGAGTCCAACTGTGGATCAGAACGATG AAAATGATATAGCTGAAGTGGATGCAAACATGAAACTGATATAAATTAAAGGTCCTCTTTGTAGGTACAAATACTAGAAT TGTAGCATTGTTGCCCTTTTACCAAAAACCATTACATAAACTTGTTAAGCTCTTCAGAATAATGATTAAATAAAGAAAAG AAATAAAATAAAATTAAATAAATTGTGGTCATCTAGAGTTCCCTGTGCCCCTTAAAATTTATATTCAGTTTTTCGTTCTC TTCATTTGGCCTGAAGACATTTATAGGGTCCGGCCTGGTAAATTTGGTTAACGATCCTGAATGATGAAAGGTAAGAGCAC CTCTATATTATTTGATGAAGTTTGACACCAGTGTGCTGCTTCATGTCAACAAGATTTATTAAGATTAACGCTAGTCTGCT AAGATTTTGGATGAGTGTATGTGAATTTATTTGGAATGGAATGTATTTTGTAAAATTAACTCTAGTTAGAAGTGAGTTTA CACCAGGAATAATTCATGTCTAACAACATGATCACATAATGAATTGACACAAAAAATGAAAGCGTATTGACAAGTTGAAC TACTCAAACACAATTATGAAATCATAATCAATCTTTTCTTTATTTAGATAGAATCAGATTTGGATCATGTAGTATACTTA CTTAGGTTTGATTGATTGTTGAAGATTGATTCCAAATAGAGACCGGTTGATTGATACGCATCTATTATTACTTTCCATAT GTTGAGCAATTTTTCTAGGCTAAAAAGCTCCAACTTTTAAGCAGTTGAGAAGTAGAATGAGTAGTGAGCAGCAAGTAAGT ATTTGAACAAGACAAGATCGAAAATAAAATCATTCCTTGGTTAAGTTTTGGTATCCAAATTCCCATCTAGTTGAGGGAAA ACCAATGACAAAGTTTGTCTGATTAATCTAAAGTAATCCTTTCCCTCCGTAGAACACTTGAAGAACAATTTGGTGTGACC ATTAAATTAATGATCGAGGGTGTGATATTAGAACTTGTTACATGAGTTTGTTAACATAAGACAATATTCCTCTGAAAACC AGAAGCTTCTCCTCCGATCGAGTTAGTTGGGTCTGGAACACGAGCAGAAATGGTTGATGTAAGCATGCGAGAAGTAGGAA TAGCCATTTTTGTGAGCATGAAAGGGGTTAAGTGGAATATTAATGTTAGATAGAGCAGAGCAGTTAAGTTAGTTACCTCA GCAAATATAATGCATGCAGAGGTGAAGTGAAGTGTAGGTCTAATTGGAGTCTGTCACCACCAGTTCCAGTACTGCATGCA TATATCAAAATTAGTGAAATTAAGCCAAAATTGGAAATTAAAGTAGCTAGCTAGCTAGTTTGATTGATTATTAATGAGGC TAGGAAGCAATAAGCAACCCAGAAATGCAAATAGATACAAGAATAACAATGATCAGAATGAGAATATATAACATTATTAA TTAAGATGGAATTTAGGGTTGGATCGGAAGATTAGATCAGACGATCGACGACTCAGCTGAAAGTAACACAACCACAACGT ACACCCTCGATCGGCTTCTCTCATCTTCTTAGCTTGTTCCAGTTAGCTTAGCTAGCTTAGGTCTCCGTCCAGTCCACCCA TCATTGGTAAAACAACCTCTGTAGTGAATCAATCACAATCACAATCACAATCACAATCACAATCGTTTCTGATCGAGTTG GTTCTCATGAATGAATGTTAATTAGCTATAGCTAGCTAGCTAGCTGCAGAGCTTGACAGTGCAGGCAACAGCCTGCGCCC AGAATTTGAGCCTGGCTTTGACATCTTCTGGATGGTCACCTGGACTGGAGATCTTCCAATTGGCGATGGAATCCGCTGGA GGAGGATCAGAACTACTGTCGGCGGCAGAGGAGAACTTGTGTGACATGGAGTAGCAGAGCTCGAGCGCCGGGAGTGTGTT TCGGAGCTCGGGGATCTCGTCGTAGCTGAAGCCGAAGCCGAGATCGACGCAGCCTTTCAACTCCTCGAGATCGTCATCGG TGAGGCTCTTGCTCCTGGCAAGATCCGCCTCTTCAACGTAGCCTTCAAGCAACAACTTCTTGTTCTTGTTCTCCTGATGA TCACCTTCCTTTCTTCGCCACGCTTCCATTTTTCTTCTTGTTCTTCTTTCAAGGTATGAAGCTAGGGAGAAAGCGGGTGG ACTATTTATGTACTCATCTATCTATCTATAGGAACGCATGTCACGGAACACACAAACTAACTAACTGTTCATATCATCAT CATGTCATGTAATCATGTATGTGTCCTCATATCATCATCATAATGGACACACATATTCATACATACATGACAGCTGTTAT TCATTCATTCATGTCATACTCATACTCATACTCATACTCATACTCATACTAATAAATAAATATCGAATATTCCTCATTTT CC
CDS sequence (LotjaGi5g1v0363400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCATGCCTTGCCGGCCCTGCTGCTGCCTTCGTGTCTGTGCGGCGCCAATTCAACCTCAATGGACCCAAATCCCAC CTCGGAATCCTCGGCGGCGCCGCCACTGTCGAGTGCCACCCACCTGACTCGCTGTGAGCTCCTTCGGCGTCGTTTGCAGA ACCTGAACCTCCTTTCGAGGCACTACAGAGACCTCTACTGGACTCTCATTCACCACCTCTTCACTCTTTACACCACTCAG TATCCCTTCTCCCCTTTCGAAGATGACTCAATTCCCCAACCTCAGCCCCAACCCTGTGCTTTTCAGGGTTGTCCTTCCAA CGCCATGCCTTTGACCTCCTTCTGCCATCTTCACATCCTTTCTGATCCAAGGCAGCTGCTTTACCAGCCATGCACTTATG TTATCCAAAGTGCACAAGATGGACGACCTATAACTTGCATGAAACCTGTAACGAGATCAACTGTTCCACCTCTCTGCCCT GACCACTTTGAAAAGGCTCAGAAGCATCTCAGCAGGACCTTGAAGATGGCAGGGCTCAATACTCCCTCAACAACTAGAAT CGCTCCTAAACTTCATGTCATACTGACACAATATGTTCGTCACATTCAAGACAAAAGACTGAAGAATCTGAAGGAAAAGG AGAGTCCAACTGTGGATCAGAACGATGAAAATGATATAGCTGAAGTGGATGCAAACATGAAACTGATATAA
Protein sequence (LotjaGi5g1v0363400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFHALPALLLPSCLCGANSTSMDPNPTSESSAAPPLSSATHLTRCELLRRRLQNLNLLSRHYRDLYWTLIHHLFTLYTTQ YPFSPFEDDSIPQPQPQPCAFQGCPSNAMPLTSFCHLHILSDPRQLLYQPCTYVIQSAQDGRPITCMKPVTRSTVPPLCP DHFEKAQKHLSRTLKMAGLNTPSTTRIAPKLHVILTQYVRHIQDKRLKNLKEKESPTVDQNDENDIAEVDANMKLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 32 | 32 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 236 | 217 | - | – | |
| PANTHER | 35 | 89 | 55 | 3.7E-52 | – | |
| PANTHER | 35 | 89 | 55 | 3.7E-52 | ||
| PANTHER | 96 | 215 | 120 | 3.7E-52 | – | |
| PANTHER | 96 | 215 | 120 | 3.7E-52 | ||
| Pfam | 99 | 163 | 65 | 1.9E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Histone acetyltransferase complex | A protein complex that possesses histone acetyltransferase activity. |
Expression pattern of LotjaGi5g1v0363400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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