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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0363700 |
| Transcript ID | LotjaGi5g1v0363700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT2G43330.1 inositol transporter 1; Swiss-Prot: sp|Q8VZR6|INT1_ARATH Inositol transporter 1; TrEMBL-Plants: tr|G7IB08|G7IB08_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi5g1v0363700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67859238..67862732) extracted from Lotus japonicus Gifu genome v1.2.
TCAACAGTGGTTAGTGGCACTAGAAATAGATTAAAATATTGACGCAAATCTGCAAATTTTTTATTTACTAAGCATGACAC TTTTGCCCTGTTGTTAAAAAAGGTGCTCTCATCATAAATTCATTAAACACATTTTATTTTATAAAAAAAAAACATAAAGC TTAAAGAGATGGGCCGTTAATGAATTATTATATTGGCAATAAGAAAATGACGTTACCTGATTCAACTCAACGTGTCCTTA AATGGCAATGATCCTCCATTTCACACCATCTTCTGAATCAGTGAAAACACAAAAGAAAGTTAAGTTACAGAATCTGGATC ATAAACTTTTCTGGGAAATATTGAAAATTTCCCAGTAATTTTGATTCCCCAACACATCATCAGGTTCTGCTAAGCCAAAC CCATTATTCATTGACCCTTGAAGGTGGTTTAAACAAATCAATCATCCTAAATTTGTTATGGTTTGAGTTTGTGTTCCATA TTGGTGGATTGATTGAGGGTGTGGTGTGGTGAATTGAGTCTGTTTGTTTTGTAAAACTGATTTATTAGATTGGTGGAAGC AACATGACGAATCCTAAAATACAATCCACACCAGGAAGCTCAGGGTATTTGGATTTGTACCCTGAACGTAAAATGGCATT TTTTCAGAATCCTTATATCCTTGGACTTGTTGCTGTTGCAGGCATTGGTGGCTTGCTCTTTGGTTACGACACAGGTACTT CATCATTCAAATTTGATACATTCACATTCACTTACTCTTTATGGTTATTAACTTATTAGTTATGGTTTCTTTGATGTGAA ACTCTTCCATAAGCTAGCTAATTAGTACATAATTTTGAGCACAGGTGTGATATCAGGAGCCCTTCTATATATAAAAGATG ATTTTGAAGCTGTTAGAGAAAGCAATTTTCTGCAGGAAACAATTGTGAGCATGGCAATTGCTGGTGCAATTATTGGATCA GCAGCAGGTGGTTGGGTTAATGATGCTTACGGACGAAAGAACGCCACTCTCATTGCTGATGTTATCTTCATCTGTGGATC AATTGCCATGGCTGCTGCACCAGATCCTTATGTTCTCATTCTTGGCCGTCTTCTCGTTGGTTTCGGTGTTGGTATTGCTT CTGTCACCGCTCCGGTCTACATTGCCGAAGCATCACCATCTGAAATAAGAGGAAGCTTAGTAAGCACTAACTCACTCATG ATCACTGGTGGACAGCTTCTTTCATACATTGTTAACCTCGCTTTTACACGGGTCAGTAAGTTCAGATTTAATTTCCATCA TAATTGTACCCTGCTTTCCTTTAATCTATACTACTATTCATAAAAAGAATACTAGATAGTTGCTTCACTTTCTTGCTTGT GAAACAAGTTATGATATGTTAATCAGGTCCCTGGGACATGGCGATGGATGCTAGGAGTTGCAGCTGTGCCAGCAATAGTT CAGTTCATTCTCATGCTATGCCTGCCAGAATCCCCAAGATGGCTCTTTACAAAGGTTCAGTACCTGCATTATTTGTTGCT TTTCTCTACAATTATATCCCTTCACCATGTTGAATTTAATTTATGTATAATTTTGTACTGCAGAATAGGAAAGATGAAGC TATTGATGTGCTTTCTAAGATCTATGACTTGTCTCGGTTAGAGGATGAAGTTGATTTCCTAACAGCTCAATCAGAGCAAG ACCGCCAGAAAAGGAAGAATGCCAAACTCGGGAATGCTTTTAAATCTAAAGAAATCAGACTAGCATTCCTTGTTGGAGCG GGGTTGTTGGTAATTAGTTAACATGCTAACTTAGAGATGCTGCAAAACATTACTTACTCATAATGATAGAGTTTTAGTAA ATGGTCATGTATACTCTTTCTGCTAAAACTAGAACGTTAGCCAAAATGGTTCTATACTTTACTAACCATATGTATGAGTT AGTAGTTGTAGTAAAATACTAGTATATCATTCAAAGCATTTATATGTGTAGAACACTAGTAGTTGTTGAGGCTATATTAA CAGAAAATGTCAGCATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATTATGTTAAT GAAACTATTTTTGTTTAATAATGTAAATAAGAAAACCATCCTGCAAAACACATTCACCACTTCATCACACTTAATTTTAA TTTTGGTATGGCACTAGTACACCACCTAAGCATATTAAGTGCTAAATGGTTTTGATTGATGAAAGAAATCCACCATATGT CATAAGTCTTTCGTCGTCATTTTTTGTCTAAGACACGTATCCTCCACGGGAGAGAATCTTGTTTGAGATGGAAACCTCTA CATCCGGTTGGGGCAACATGAGTTTCTTTTCCATCTACATGACTCAAATCCGAGACCTTAATTAAAGGGAATCAAGCATA TGTATTACTTGAACTAACTCATTGTCTCTTTTGCTATAATTTGCTTGTTTCCAGTTGATGAATGAATTTATAATATGTGA TCTAGCTAATTCTAATATGAAAGCTTGAATTTTAAGTTAATGACATGATTACATATATATTGCATTGGAAATGTGTTGTG TTCTTAATTTCTTATAGCATTCCATATGGTTGTGCAGGCCTTTCAGCAGTTTACAGGCATAAATACAGTGATGTACTACA GCCCAACAATTGTCCAAATGGCTGGCTTCCAGTCCAATGAATTGGCTCTTCAACTCTCCCTCATAGTTGCTGCCATGAAT GCAACTGGAACAATTCTTGGCATTTACTTAATTGACCATTCAGGGAGGAAGAAACTAGCACTTTGTAGCTTAGGAGGAGT GTTTGCATCTCTGGTCCTATTGTCCTTGGCATTCTTAAACAAATCATCATCTGCAAATGACTGGTATGGATGGCTAGCAG TTTTGGGTTTAGTCCTTTACATTGGATTTTTCTCACCAGGAATGGGACCTGTGCCATGGACTGTGAACTCAGAGATATAC CCTGAAGAGTACAGAGGAATTTGTGGTGGCATGTCAGCTACTGTGTGTTGGGTTTCAAACTTGGTTGTGTCACTGAGCTT TCTCTCAGTTGCCGAAGCTCTAGGGACTGGTACCACTTTCTTGATCCTTGCTGGGATAACTGTGCTTGCCTTTCTGTTTG TGCTTGTGTATGTCCCTGAGACCAAAGGATTGACTTTTGATGAAGTGGAGCTGATTTGGAAGGAGAGAGCTTGGGGCAAG AACACAGACTCAACAAACCTTCTTCATGGGGAAAATGAATATCAATCCTAGAATTCAGTGTGTTTGACCCAGCTGAGTGC AATGTGAACCAATTTTTATCTCAATTCATAAAAAAACTTAGTTCACTTTTTTTTACCTCAAAATGAATGCTCATATTATT TGCACAGGTTGATATCCAAACATAGTCACCGCGCTGTTAGGAAATTTTATATCTAGTAATATTTTAAAGTACATTTCATT TATACACCCATTATCTCATCCCTGAATTTTATTTGATGTTAAATATATTCCCATG
CDS sequence (LotjaGi5g1v0363700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAATCCTAAAATACAATCCACACCAGGAAGCTCAGGGTATTTGGATTTGTACCCTGAACGTAAAATGGCATTTTT TCAGAATCCTTATATCCTTGGACTTGTTGCTGTTGCAGGCATTGGTGGCTTGCTCTTTGGTTACGACACAGGTGTGATAT CAGGAGCCCTTCTATATATAAAAGATGATTTTGAAGCTGTTAGAGAAAGCAATTTTCTGCAGGAAACAATTGTGAGCATG GCAATTGCTGGTGCAATTATTGGATCAGCAGCAGGTGGTTGGGTTAATGATGCTTACGGACGAAAGAACGCCACTCTCAT TGCTGATGTTATCTTCATCTGTGGATCAATTGCCATGGCTGCTGCACCAGATCCTTATGTTCTCATTCTTGGCCGTCTTC TCGTTGGTTTCGGTGTTGGTATTGCTTCTGTCACCGCTCCGGTCTACATTGCCGAAGCATCACCATCTGAAATAAGAGGA AGCTTAGTAAGCACTAACTCACTCATGATCACTGGTGGACAGCTTCTTTCATACATTGTTAACCTCGCTTTTACACGGGT CCCTGGGACATGGCGATGGATGCTAGGAGTTGCAGCTGTGCCAGCAATAGTTCAGTTCATTCTCATGCTATGCCTGCCAG AATCCCCAAGATGGCTCTTTACAAAGAATAGGAAAGATGAAGCTATTGATGTGCTTTCTAAGATCTATGACTTGTCTCGG TTAGAGGATGAAGTTGATTTCCTAACAGCTCAATCAGAGCAAGACCGCCAGAAAAGGAAGAATGCCAAACTCGGGAATGC TTTTAAATCTAAAGAAATCAGACTAGCATTCCTTGTTGGAGCGGGGTTGTTGGCCTTTCAGCAGTTTACAGGCATAAATA CAGTGATGTACTACAGCCCAACAATTGTCCAAATGGCTGGCTTCCAGTCCAATGAATTGGCTCTTCAACTCTCCCTCATA GTTGCTGCCATGAATGCAACTGGAACAATTCTTGGCATTTACTTAATTGACCATTCAGGGAGGAAGAAACTAGCACTTTG TAGCTTAGGAGGAGTGTTTGCATCTCTGGTCCTATTGTCCTTGGCATTCTTAAACAAATCATCATCTGCAAATGACTGGT ATGGATGGCTAGCAGTTTTGGGTTTAGTCCTTTACATTGGATTTTTCTCACCAGGAATGGGACCTGTGCCATGGACTGTG AACTCAGAGATATACCCTGAAGAGTACAGAGGAATTTGTGGTGGCATGTCAGCTACTGTGTGTTGGGTTTCAAACTTGGT TGTGTCACTGAGCTTTCTCTCAGTTGCCGAAGCTCTAGGGACTGGTACCACTTTCTTGATCCTTGCTGGGATAACTGTGC TTGCCTTTCTGTTTGTGCTTGTGTATGTCCCTGAGACCAAAGGATTGACTTTTGATGAAGTGGAGCTGATTTGGAAGGAG AGAGCTTGGGGCAAGAACACAGACTCAACAAACCTTCTTCATGGGGAAAATGAATATCAATCCTAG
Protein sequence (LotjaGi5g1v0363700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTNPKIQSTPGSSGYLDLYPERKMAFFQNPYILGLVAVAGIGGLLFGYDTGVISGALLYIKDDFEAVRESNFLQETIVSM AIAGAIIGSAAGGWVNDAYGRKNATLIADVIFICGSIAMAAAPDPYVLILGRLLVGFGVGIASVTAPVYIAEASPSEIRG SLVSTNSLMITGGQLLSYIVNLAFTRVPGTWRWMLGVAAVPAIVQFILMLCLPESPRWLFTKNRKDEAIDVLSKIYDLSR LEDEVDFLTAQSEQDRQKRKNAKLGNAFKSKEIRLAFLVGAGLLAFQQFTGINTVMYYSPTIVQMAGFQSNELALQLSLI VAAMNATGTILGIYLIDHSGRKKLALCSLGGVFASLVLLSLAFLNKSSSANDWYGWLAVLGLVLYIGFFSPGMGPVPWTV NSEIYPEEYRGICGGMSATVCWVSNLVVSLSFLSVAEALGTGTTFLILAGITVLAFLFVLVYVPETKGLTFDEVELIWKE RAWGKNTDSTNLLHGENEYQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 5 | 497 | 493 | 5.5E-259 | – | |
| PANTHER | 5 | 497 | 493 | 5.5E-259 | – | |
| SUPERFAMILY | 27 | 475 | 449 | 5.1E-74 | ||
| TIGRFAM | 27 | 474 | 448 | 6.7E-122 | ||
| Gene3D | 28 | 482 | 455 | 6.4E-133 | – | |
| Phobius | 31 | 60 | 30 | - | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| ProSiteProfiles | 35 | 467 | 433 | 54.679 | ||
| Pfam | 36 | 478 | 443 | 9.8E-122 | ||
| CDD | 38 | 465 | 428 | 0.0 | – | |
| PRINTS | 43 | 53 | 11 | 1.4E-27 | ||
| Phobius | 61 | 71 | 11 | - | – | |
| Phobius | 72 | 94 | 23 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| TMHMM | 104 | 123 | 20 | - | – | |
| Phobius | 106 | 123 | 18 | - | – | |
| Phobius | 124 | 128 | 5 | - | – | |
| TMHMM | 128 | 150 | 23 | - | – | |
| PRINTS | 129 | 148 | 20 | 1.4E-27 | ||
| Phobius | 129 | 150 | 22 | - | – | |
| ProSitePatterns | 134 | 159 | 26 | - | ||
| Phobius | 151 | 161 | 11 | - | – | |
| Phobius | 162 | 184 | 23 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 185 | 189 | 5 | - | – | |
| Phobius | 190 | 212 | 23 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 213 | 274 | 62 | - | – | |
| Coils | 238 | 258 | 21 | - | – | |
| Phobius | 275 | 298 | 24 | - | – | |
| TMHMM | 276 | 298 | 23 | - | – | |
| PRINTS | 287 | 297 | 11 | 1.4E-27 | ||
| Phobius | 299 | 312 | 14 | - | – | |
| Phobius | 313 | 336 | 24 | - | – | |
| TMHMM | 313 | 335 | 23 | - | – | |
| Phobius | 337 | 342 | 6 | - | – | |
| Phobius | 343 | 364 | 22 | - | – | |
| TMHMM | 344 | 364 | 21 | - | – | |
| Phobius | 365 | 375 | 11 | - | – | |
| TMHMM | 374 | 396 | 23 | - | – | |
| Phobius | 376 | 400 | 25 | - | – | |
| PRINTS | 379 | 400 | 22 | 1.4E-27 | ||
| Phobius | 401 | 411 | 11 | - | – | |
| PRINTS | 402 | 414 | 13 | 1.4E-27 | ||
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 412 | 433 | 22 | - | – | |
| Phobius | 434 | 444 | 11 | - | – | |
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 445 | 463 | 19 | - | – | |
| Phobius | 464 | 501 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0363700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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