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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0364800 |
| Transcript ID | LotjaGi5g1v0364800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8H102|BH128_ARATH Transcription factor bHLH128; TrEMBL-Plants: tr|V7BAJ5|V7BAJ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0364800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67956928..67962446) extracted from Lotus japonicus Gifu genome v1.2.
TTCATTTCATCTTGCAAGTGGCTCTATTCTATTCTTGCCTGCCTGCCTGCAATTGGCATCTTCCTTTCCTTTTTTTCTAA TTCTAATCTAATAGTAATAGTAATAGTAATAGTAATCTCCCCCACTGGCACTACCCAACTTGCTTCCTTCCTTTACTTTC ATTATTATATTATATATTATATATTATTCATTTATCCGAATCCGACCACTTGTGTTTCTATTTCCATTTCCATCTCGCTC TCATTCAATCCATTTCCAATTCCAAATCCAAATCCAATTCAATGTATCCTCATCATTCCTCTTCTTCTTCCTCCTCCTCC TCCTCCCAGACAGGCACTGGCTTGACCCGCTACGGCTCCGCACCAAGCTCTCTCCTCAACAGCACCGTCGAGGCTGTCTT AGCAGCAGGTGGATCGCGTCTTCTTCCCCCCGGGGGTGGGGGTGGGGCCCAAGCTCACTACTACTCTTCCTCCGGGGACT CTTCTTCCGATACAACCTGCAAAGAGCATAACATCAGATCTTCTCCTACTTCATACCACCATGACGCCTTTCTTAATTCT GCTGGATCCGCCTCCTTGCTCCGTCAGAAGAGCTCTCCCGCCGGCTTCCTCTCTCACAATCACAATCACAATCACAATCA CAATCACAATCACAATTCCAATCTCAATGGTGAGTCAGTACTATCTAATCTAATCTATTCATTTATTGCTACTATATCAT TCATTCATTCATTCATTCTTGTTCTTGGCAGCAGCAGGGTTCACCATCACCAGGGGAAGCTCACATTCTCATTCTCATTC TCAATCTCAAGGAGGAGGAGGAGGATCGAGGTTGAAATCTGAATTGAGCTTCACGGCACAAGGCCAAGAATGTCTCTCTC GGATATCCGAAAATCTTGTTGTTGATGCCTCCACCTCTTATGGGACCCAACACCAGCCCTGGGGGGGTCGGGGTCAAGAT GGGGATAATTCCATCGTCTTTTCTGCTCCTCCTAAGCGTTCCAAAACTAACGATCCTGATTTTCTCACCGCCCTCGATTC TCAGGTACCTTCTAACTTCAACTATATATTATCGCTTAACTTCATTCATTATTATGCAGTATGTAAAATGATGTATGTAT TGTATTGTATTGTATTGTATTGTATTGTTCAGTTTAGTATGCCTCAGACAACTCTGGAAATGGCAGCCGTCGAGAACATG TTGCACATTCCTCAAGATTCCGTCCCTTGTAAAATCCGTGCTAAACGAGGCTGCGCTACTCATCCCCGCAGTATTGCTGA ACGGGTCACTTTCTTAATCTCACTATATAGCCTTTATATTATATTAACTGTCATTTCTCATACACCAGAACCAGACTACC CTCACTCTCAACTCAAACATAATGAAATGGCTGGCACCAACATCCATCAAATAGGAAATTGTATTACACCTCCACTACAC ACGATGCTTCTTAGAAAAAGATCCTTGGAAGATCTGTTGCTATTTTCCTCGTCAAATGAGGACATACATTGACAACCCCT ACTTCATCTCAATTGGCATAAATTTAGATGTGAATATAAAAGGAATACACATACCTTATTAGGGAGAAAGCCTTCCCACT CCGGCTCTGTCCAATCTTTGCCAACTAAAGGCATCAACTAGGAATTCATGAGAGGATCAAAACTTATATCAGGGAGGAAT TAGGAAGAGCGTTTAGTCGTGTTTGCCTGCTGAGAAATAGCTGGAAAAGAGAAAGAAAATGTTTCTTTTGTCTACTTCTC TTTGTGGGATAGAATAAATTTCTATCAAAAAGTTAAATAAATTCAGTTTAGGCTGACCCATGTTGGCCCTAGCCATAACC CACATCATTTAAGATTTGTGGTTAGGATTCAAAAATCCACTGGTTAGAGGGGCCAAATGGGATGGGTCTAACTTAATTGT TTTATATCTTATGATCTTATCTGTTCATATTTCTCTGGTTTCATATGGATTGTATATTAATCAAAATCCATGAACAATGA TTCTCAATTTTTTTCATATATATATATATACAGGAGAGAAGAACTAGAATAAGTGGGAAGTTGAAAAAATTACAGGACCT TGTACCTAATATGGATAAGGTATTGGTACTTTCTTCTTTAGCTGTTCTATTTGGGCCTGCTAACATTCTTTAGTTAACAA TAGGTTTGGTACTTATGTTTTGTCATCAGCAGTAAGTTTCCAATGCATTGTCAATACTGTTTAATTTCCTGTTCTAAGGA CTACCGGGATACATTCTGCTGCCTATCAGTTATGATTACCTTTAGGATCAAATTATGATGAAACTCCATAACTACAAGTC CTTGTTTAAATTACTAAAGCTTGAATTGGCATTGAACCTCTCATATAAACACTGAGGTGTAAGATGAAGCTCAGAAAAGA CAAGCTCCATGCTTTCTCGGCAATGAATTTCAATTTTTTCATGCTCAATCTTGCTTTAGCTTGAAGCATTATTTGGAATT AGAATTTTGCTTTTACTTCCGCTCTCCTGGTTCATTTCTCTTAAGTAAGATTTATGTTCAAGAGTTTCCATTTTAACCTA TACTAAGTTACATCAGTTTATAGTTACAAAATAGGTATATGGCTCATGCCACTAGAGCATTTACAAATCCCTTCTATAAA TGAGTATGAACTATGAATGTATATTAGATTTAATTGGGTAAAGAGTGATAATATTATGTCGAAAGAGTGAGTAAATAATA TATATTATTGGTGGCTTAATGTTGTTTCAAAATGTCATTGTAGCAAACAAGTTATGCAGACATGCTGGATTTGGCCGTTC AACATATTAAAGGTCTTCAAGGTCAAGTTCAGGTGTGTAGAAGTACCTTAGCATTTAGTGTGTAGAATAGCTTTGATTCC CAAATAAAAAAAAATGCTACACATGAATGCGGTATTCTTAAAATTAAAAATTGGTTATCGGTAACTTTTAGTAAAGCTGG TATGCAATTTGTGATTTTATGAAATTTTCACATCTTTAAGAATAAGGATTACAAATTATAAATTGAAGCATTAGTTAATT GTTAATACCTCTGTTGATGTTGATTACATTATCTTTTCACCCTCTTTCAGAAGCTTCATACCGAACTTGAGAATTGCACC TGCGGATGCAAACAAAGCACATAACTTATTTAGTTTTACGGGATTCTATGGCAATCCGCATAGAAGTCAAGGTTTTGATG GCAAAGTAGGGAACTGCTTATGTATCAATTCTACTACAGCTGTACAGTGTACGTTGTAATCTACCTGTGGTAGTCTAGAA AAAAGTCGAGGTTGATTTTCTGTTGACCTTAATTTGTATTCTTGTTTGGGTATATCTGATACGATGAATAATACAATTAA CCTTTATGGAATGTGAAGAATGAAAGAAAGAGTGGGATGAGTAAGAATAAAATGATAAATCCTGTTCCAAGTTTGATTCA ATGAAAATTGGTACTAGTAATAAATCATAAAAGTTACCGACAATGAATAAGTATTTACCTTAATTTTACAGGTATAATAA GTACGAGTATTGGTACTATAAATTCAATTCTATCCATATTCACACAAAATAATTATCATATTTGATTGTTGAATAATTTC TGAGCTAATGAAATAGTTGTTCTAAGTTTAGAAGGGTATTGTTTAACATTTTCCTCAACAGAATTTCATCCCTATATTTT GTTTGAATATCATGAAATCATATAATTTGATTATGTTTTTACAAAATCAGGTGCTTTTATGATAAAGTTTTTTTTTCCGC ACTAACTGAGCTTAAGAGCAAGAAAGAGCTTTGGTGACGATGCCGCCACCCATTCCTCTTTCTCTAGGTAGACTTTCCCT TTTACTTGATAGATGTTTTATTTCCCCACAATAGTGAATTCTCTTTCACATTTGGAGGTTTAGCTATGCAAGTAAGTTAG TTTCCCCTTTTAGTCTAGGTTTCTTCCCTTTTTTCAGTTTGTTCCCCACTCAGTCGCCCTTACCTCCACCTCGGCCATCT TTGTCGTAGTACCTTGCCTCCTTTGCATCAGCAACCATCTTCTCTACCATTGCTACCATCTCCACCACTTTTGCAATTGA CGACTAATTCACCGCTCCCACTTCCACCATTGCTGCCTTCGCTTACCTTGTCAACTTTCTTATGTTGTTTGTTGGGTTGT ATAAAAACCGGCATTTGCTTCCCATGTTCTTGGGGTTGTTCATTTAACCCCATTTGTTGTTGCGTAAGGCGCAATTTTGA TTTCTCAATTGCACATATTGCAACTCATGTATAGTCGAATGAGAAAGGAATAAAAAACAATCTCTCTCCACTTAGAAGTA AGTTGGGTCTCGGGTGAATATTGAGAGTTTAGGTGTTTTATGATTAGTTTTTAATGATTAAGTTAGTTTTGTATTAAAGT ATATTATATTTTAAAATCTGAATTTAACTTGCATGTGATATTCATATTCATTTAAAAAAAACTTGTGATATTGGAATCCT TAGTTGGTTTAGACGGACGCAAGCAGAAAGAAAAGCTAGGACTAGGATTATATTGCGCAATTGGGAAACGGACGGACGGT GATGGATTTAGTTTGGTTCGTTAAGATTAAGAATAGGAATAGCAAAACCAAAACCAAAACAAAACAACAATAGTCTCATT GATTCGCGGAGGAGAAGAGAGGGGGCAAACGCAATGCAATTGCAATTGCAATGGAGATCAGAAAAGTGAGATGCAGCAGC ATCGTTTTGGGGTTTTGCAATGTGTTGGTGTTCGTCCTGGGTGGTTTTCTCATTTTGCACACTTTCCGTCTCTGTGATCG GCGCTTGTTGCTCCCATTCGTGGCTGTTTCCATCGCCTCTCTTATCAGGATTGTCGTCATGTTTCAAACCGCTTTTGCAC AGGATGCCGCTGCCAAGCTCATTCTCGACGACACCTCCGACCTCCTTTTACGCCTCAACAGACGGGTGTGTTGTGTAGTC AGTCTACTTGTTATTTATTCTTCTTAATATTCATTCATTCATTCATTCATTTCATACGTATTAATTAATTATTTTCCAAG ATATACTATAGGCAAGGTATAAGAAATGGCTCTGGTGGAGTCGATTTACTGTCATGGTTACTGTCCTGCAATTTCTCTCC GCAACTTACCTCCTCCTCAACTTTCTTCACTATTTCTCCAAAGATACAACATCTAATCATTGTCTTTTAGGTTGGTGAGT TCCTTCCTTCCTTCATCTCTCTTCTTCATGTCACCACTTCACCTTCCTTCCACTTTATAACCAATCTTATCTTATGCATG CCTGTTCTTCTAATGCAGTATTGAAATTGAAATCTGACTGGTCCAACCACAAGTTACTCTCTCTATTCATCATCATGGTG TGTTCTGTCGCTATAGCACAGTGCTTTACGGGATCTGATGTTCTCCAATGGAGATCTTTCTATCAAACCCATGATAATGC TTGGAAATCCCACTATAGGGAGGTCTTCGATCATGGCATACGCGAGACCTTGTGTTGTCTAGGACGCCTCAAATACTTG
CDS sequence (LotjaGi5g1v0364800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATCCTCATCATTCCTCTTCTTCTTCCTCCTCCTCCTCCTCCCAGACAGGCACTGGCTTGACCCGCTACGGCTCCGC ACCAAGCTCTCTCCTCAACAGCACCGTCGAGGCTGTCTTAGCAGCAGGTGGATCGCGTCTTCTTCCCCCCGGGGGTGGGG GTGGGGCCCAAGCTCACTACTACTCTTCCTCCGGGGACTCTTCTTCCGATACAACCTGCAAAGAGCATAACATCAGATCT TCTCCTACTTCATACCACCATGACGCCTTTCTTAATTCTGCTGGATCCGCCTCCTTGCTCCGTCAGAAGAGCTCTCCCGC CGGCTTCCTCTCTCACAATCACAATCACAATCACAATCACAATCACAATCACAATTCCAATCTCAATGCAGGGTTCACCA TCACCAGGGGAAGCTCACATTCTCATTCTCATTCTCAATCTCAAGGAGGAGGAGGAGGATCGAGGTTGAAATCTGAATTG AGCTTCACGGCACAAGGCCAAGAATGTCTCTCTCGGATATCCGAAAATCTTGTTGTTGATGCCTCCACCTCTTATGGGAC CCAACACCAGCCCTGGGGGGGTCGGGGTCAAGATGGGGATAATTCCATCGTCTTTTCTGCTCCTCCTAAGCGTTCCAAAA CTAACGATCCTGATTTTCTCACCGCCCTCGATTCTCAGTTTAGTATGCCTCAGACAACTCTGGAAATGGCAGCCGTCGAG AACATGTTGCACATTCCTCAAGATTCCGTCCCTTGTAAAATCCGTGCTAAACGAGGCTGCGCTACTCATCCCCGCAGTAT TGCTGAACGGGAGAGAAGAACTAGAATAAGTGGGAAGTTGAAAAAATTACAGGACCTTGTACCTAATATGGATAAGCAAA CAAGTTATGCAGACATGCTGGATTTGGCCGTTCAACATATTAAAGGTCTTCAAGGTCAAGTTCAGAAGCTTCATACCGAA CTTGAGAATTGCACCTGCGGATGCAAACAAAGCACATAA
Protein sequence (LotjaGi5g1v0364800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYPHHSSSSSSSSSSQTGTGLTRYGSAPSSLLNSTVEAVLAAGGSRLLPPGGGGGAQAHYYSSSGDSSSDTTCKEHNIRS SPTSYHHDAFLNSAGSASLLRQKSSPAGFLSHNHNHNHNHNHNHNSNLNAGFTITRGSSHSHSHSQSQGGGGGSRLKSEL SFTAQGQECLSRISENLVVDASTSYGTQHQPWGGRGQDGDNSIVFSAPPKRSKTNDPDFLTALDSQFSMPQTTLEMAAVE NMLHIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGQVQKLHTE LENCTCGCKQST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 14 | 330 | 317 | 3.6E-94 | – | |
| PANTHER | 14 | 330 | 317 | 3.6E-94 | – | |
| MobiDBLite | 50 | 86 | 37 | - | – | |
| MobiDBLite | 60 | 86 | 27 | - | – | |
| MobiDBLite | 106 | 160 | 55 | - | – | |
| MobiDBLite | 122 | 160 | 39 | - | – | |
| Gene3D | 256 | 321 | 66 | 4.6E-12 | ||
| ProSiteProfiles | 260 | 310 | 51 | 14.005 | ||
| SUPERFAMILY | 263 | 325 | 63 | 7.46E-15 | ||
| CDD | 264 | 315 | 52 | 5.3262E-11 | ||
| SMART | 266 | 316 | 51 | 6.3E-13 | ||
| Pfam | 266 | 311 | 46 | 3.9E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0364800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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