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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0365900 |
| Transcript ID | LotjaGi5g1v0365900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY transcription factor-like protein; TAIR: AT5G14090.1 regulator of nonsense transcript protein; Swiss-Prot: sp|Q5XV40|LAZY1_ARATH Protein LAZY 1; TrEMBL-Plants: tr|A0A0S3SL31|A0A0S3SL31_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0365900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:68059344..68061379) extracted from Lotus japonicus Gifu genome v1.2.
AGAGACATGAGTAGCTTTAATTTGTGGAAGATGATCGATCTTATGAAATAGAGTTCCTTCGCTTATTTTATCCTCAGAAT TCACGCAATCAAAGCTCAAAAGATGAAGGTAAGATCCATTTTCAAGCATGCCTTGCAGAACCAAATTCGACTGTCTACAT GCTCTTCTGAGTTGGTTAATATATGCAATCTCTGATCACTTTGCTGCAGTTACTTGGATGGATGCACAGAAAATTTCGCC AGAATAGCACTGAACCGTTTAAAGATCACTTGGTTATTGGTAAGTTATATATATGCTGCTGGCATAATACATTTTTTATG GGCCACCAAAAGTACATAATTAATTTAACTAACTGCATGTCTAACTAAATATTACATGACTTGATCATTGATGTATGTCA CTACGTACCTTGAAATTATCAAGTTCACGAGAACTCTGAAATCAATTTAATTTAATGTGTGTATCACCATAAATAAATAT TGGTATAGCCTATTAATAGTAAACTACCCAAGGTAGGACAATAATCTTGTAATTATCTTTCAGGGAAGGCAGGACATGAA ATTGATGAACGCAGTTACCATCTGAAACCGAACTTTGGGAGCAAACATGTCCAACAAATTGAGAAAGAGCACAGCCTTAG AAAATCTTTCAGTGGTCAGGAAGCTGCAGATGCAAGAGTAGAAGATGATGAGTACGTGTATGAGGAAGATGGTGCTATGT ATGAGCTTTTCCATGGGTTCCTCGCAATTGGAACTCTTGGGCTTGGGTGCAGTACTGATCCATCAGCAACACCAACATTT GGCAATATCTGTGTTGAGAATATAATTACTGAAAAGGAAGATGAAGTGACTGAGAATGAATTGAAGCTGATCAATGATGA GCTCGAGAAAGTTCTTGGAGATGATGAGTGTATTAATTCTGCCAGAAATAGCCATGTAAGTAGCAGTACTGCAGGGAGAA GTAGTCATGGAAGCATGATATCATTGAGCGGAAAGCCAATGAATATGATGGAAGGTAATTCTGGTAATATTGGAACTTCT TCAATTTGTCCACTTCAGGGTTATCTTTTTGGATCAGCTTCCATTGAATTACCAAAAGTAGTACCAGCAAAGAGTAGGAC ATCACTTGGGGAGCTATTTCAGAGAAGCAAACTAGCAGACCAGGAGATTAATGAAAAGGGTGATAAAATCAGTGAAAAAG AAGATAAATCTGCCCTGCATCTGGTAAGAAAGAAGCTAAAAAAAAAAATATTGCTCCATACTTGTTCCCGAAACTCCTCC TCAAATAACGGTGGACCTGTTGATTCAGCTAATTCAGCAGACACAAAATTGCGTAAGGTACGTACATACACTTGTAAATT CCATAATAATGTGATATTCGATCGTTATGGTTCTTCTAGTCATTGAATAATTTGTGGTCGGGTTGTAGATTCTCCATATG TTCCACAGGAAAGTTCACCCTGAAAATTCAGCAGCTGAACCAAAGAATGAGTGTAAAAAGAAAACAATCAATGTGGACGG AGGCCATAACAAATTTGAAGCATTAGTTCCAAAGGAAAGCAACAAGAGCCAATCAAATCCAGTACTCCAGTTTAGCCTTG GCATTGAAGATTCATCAGAGAATAGGGAGCACTGGATCAAAACTGATTCGGATTGTAAGCAAGCACAACATTACTCTCGA TACAGAACAGTACTCCAAATGGATTTCCATGAATATGCATGATAACAATTAAGGCCAATAGTTCCTTTTAATTTGAGTAA TATGTGTGATACATGCCTATAAATACTGTACCTGGCTCAGATTTTGCTTTTTATAATTGCAGACTTGGTCTTGGAGCTCT AGCTAGGAGGCCGCAAAGGAAGAAATTGAGCTGTTTTTAAGCTATATCGTCCTCAGAAATTAATAATGTGTTAATTTGTA AGATTTTCTCTAATTTGCGATCGAGGAGCAAGTATTAAACATATTATATATCATTTGTATGTCAATTATATATGTATGTA TGGTTTCAATCTGAAGCATCATTTTGCATGTGCAAG
CDS sequence (LotjaGi5g1v0365900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCTCTGATCACTTTGCTGCAGTTACTTGGATGGATGCACAGAAAATTTCGCCAGAATAGCACTGAACCGTTTAA AGATCACTTGGTTATTGGGAAGGCAGGACATGAAATTGATGAACGCAGTTACCATCTGAAACCGAACTTTGGGAGCAAAC ATGTCCAACAAATTGAGAAAGAGCACAGCCTTAGAAAATCTTTCAGTGGTCAGGAAGCTGCAGATGCAAGAGTAGAAGAT GATGAGTACGTGTATGAGGAAGATGGTGCTATGTATGAGCTTTTCCATGGGTTCCTCGCAATTGGAACTCTTGGGCTTGG GTGCAGTACTGATCCATCAGCAACACCAACATTTGGCAATATCTGTGTTGAGAATATAATTACTGAAAAGGAAGATGAAG TGACTGAGAATGAATTGAAGCTGATCAATGATGAGCTCGAGAAAGTTCTTGGAGATGATGAGTGTATTAATTCTGCCAGA AATAGCCATGTAAGTAGCAGTACTGCAGGGAGAAGTAGTCATGGAAGCATGATATCATTGAGCGGAAAGCCAATGAATAT GATGGAAGGTAATTCTGGTAATATTGGAACTTCTTCAATTTGTCCACTTCAGGGTTATCTTTTTGGATCAGCTTCCATTG AATTACCAAAAGTAGTACCAGCAAAGAGTAGGACATCACTTGGGGAGCTATTTCAGAGAAGCAAACTAGCAGACCAGGAG ATTAATGAAAAGGGTGATAAAATCAGTGAAAAAGAAGATAAATCTGCCCTGCATCTGGTAAGAAAGAAGCTAAAAAAAAA AATATTGCTCCATACTTGTTCCCGAAACTCCTCCTCAAATAACGGTGGACCTGTTGATTCAGCTAATTCAGCAGACACAA AATTGCGTAAGATTCTCCATATGTTCCACAGGAAAGTTCACCCTGAAAATTCAGCAGCTGAACCAAAGAATGAGTGTAAA AAGAAAACAATCAATGTGGACGGAGGCCATAACAAATTTGAAGCATTAGTTCCAAAGGAAAGCAACAAGAGCCAATCAAA TCCAGTACTCCAGTTTAGCCTTGGCATTGAAGATTCATCAGAGAATAGGGAGCACTGGATCAAAACTGATTCGGATTACT TGGTCTTGGAGCTCTAG
Protein sequence (LotjaGi5g1v0365900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSLITLLQLLGWMHRKFRQNSTEPFKDHLVIGKAGHEIDERSYHLKPNFGSKHVQQIEKEHSLRKSFSGQEAADARVED DEYVYEEDGAMYELFHGFLAIGTLGLGCSTDPSATPTFGNICVENIITEKEDEVTENELKLINDELEKVLGDDECINSAR NSHVSSSTAGRSSHGSMISLSGKPMNMMEGNSGNIGTSSICPLQGYLFGSASIELPKVVPAKSRTSLGELFQRSKLADQE INEKGDKISEKEDKSALHLVRKKLKKKILLHTCSRNSSSNNGGPVDSANSADTKLRKILHMFHRKVHPENSAAEPKNECK KKTINVDGGHNKFEALVPKESNKSQSNPVLQFSLGIEDSSENREHWIKTDSDYLVLEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 8 | 378 | 371 | 2.7E-104 | ||
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 378 | 359 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Gravitropism | The orientation of plant parts under the stimulation of gravity. | ||
| Biological process | Regulation of auxin polar transport | Any process that modulates the frequency, rate or extent of auxin polar transport. |
Expression pattern of LotjaGi5g1v0365900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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