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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0366200 |
| Transcript ID | LotjaGi5g1v0366200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Fatty acid oxidation complex subunit alpha; TAIR: AT5G43280.1 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1; Swiss-Prot: sp|Q9FHR8|DCI1_ARATH Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal; TrEMBL-Plants: tr|G7JC24|G7JC24_MEDTR Enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase; Found in the gene: LotjaGi5g1v0366200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:68093565..68095239) extracted from Lotus japonicus Gifu genome v1.2.
GTAGTGGTTAGCACTCTGGACTTTGAATCCAGCGACCTGGGTTCGACTCCCGGTAGGACCTTTTGTTCTTTTAGAATCAA TTAATTAATTAAATTATTGTTTTTGTTTGAACGTCAATTAATTAAATTCTGTGCTCTGCTATATGAAATTGTTGAGAGAC AGAAGATAAGGCAAGGCAGGCAATAATAATGGAAGTGAAATACAAAACCCTAGAAATTGTCCCAAAATCTGGTTCTGGTT CTGGTTCTGGTTCTGGTTCTGGTTCTGGTGTGTGGTATCTTACATTGAATCGTCCCTCACAACGCAACGCCCTTTCCGAT GATTTCTTCTGTGAGTTCCCAAAAGCCCTGTGTGCACTCGACCACAACCCCAACGTGAACGTCATCGTTTTATCCGGTGC TGGCAACCACTTTTGCTCCGGCATCGACCTTTCCCTTTTGAAATCTACATCTACTACTGGTGCCAATGGCGGCGAGAGTC TCCGGCGACAGATCCTGGCGATGCAAGATTCGTTGACGTCCCTGGAACGATGCAGGAAACCCGTCATTGCCAGTATACAT GGAGCTTGCATCGGTGGTGGAATTGATATCATAACCGCCTGTGACATAAGGTTTTGTACGAAGGAGGCGTTTTTCTCGGT GAAGGAGGTGGATTTGGCCCTGGCGGCTGATCTGGGAACTCTTCAGAGGTTGCCCATGATTGTCGGTTTCGGCAACGCCA TGGAGTTGGCTTTGACGGCTCGCAGGTTCTCAGGTTTGGAGGCCAAGGAGTTGGGTCTCGTTTCTCGGGCTTTCGATTCC AAACACGACCTAGACGAGGGCGTCTACCAGGTCGCTCAGGGTAAGTTTAATAAGTTACATACATACATACATACAGAGCA GCAAAATCTATCTATCTATCAATCTAGATTTCCTCATATTTTTAACTAAATCATCAATCATGTTATGTACATGATCCATC TTATGACAGCAATTGCTACCAAGTCTCCCCTTGCGCTTATTGGGACAAAAACTGTGTTGCTTAGAAGTAGGGACTTAACT GTGGATCAAGGCTTGGATTATGTTGCAACCTTGAATTCTGCCAGATTGTTATCTGCTGATTTAACTGAAGCAGTTATGGC ACAGATGCAGAAGCGGAAGCCACTTTTTTCAAAGCTCTAAAGCGCCACCATGCATCACCTTTTGTTTCTTACTAAATACA TCATATTCATATGTGAGACAGACTGAGATTTTCCTGTTTCTTTCTTTTTGCTTTGCTTTTGCTATGTCAAGAAATAAAAA TCATGATATATATTCATTTGGATCACAGAGTTAAGTACTGCTCATCATTGATTTATTATTATACTCATTCTCTTATTCTA CGCATGCATATTACGTATCTGTTGTCAATCACCAATTCTCTTCCCGGTCAAGGCATAGTCTATACAAGGCTCATTCTCTT CTAACCGGTTTTAGCAATCTGGTTTTTAAATTTTGGTTTAAGCATTTGGACCTCTAAAACTGAATATCTTCTAACAATTG ACTTTCCCTATTCAGCTCTTCTTAGCAATTTGCTCTGCTCCTTCATTAACAATAGCCAAATGAACTTCTTGCTAGCAGTG AGAATAGGTTGGGTCTAGGTAGTCTATGAATAGGCTTGACGTACTTAAAAATCTTAAGGCCCGAGTCTGGTCTGT
CDS sequence (LotjaGi5g1v0366200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTGAAATACAAAACCCTAGAAATTGTCCCAAAATCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGG TGTGTGGTATCTTACATTGAATCGTCCCTCACAACGCAACGCCCTTTCCGATGATTTCTTCTGTGAGTTCCCAAAAGCCC TGTGTGCACTCGACCACAACCCCAACGTGAACGTCATCGTTTTATCCGGTGCTGGCAACCACTTTTGCTCCGGCATCGAC CTTTCCCTTTTGAAATCTACATCTACTACTGGTGCCAATGGCGGCGAGAGTCTCCGGCGACAGATCCTGGCGATGCAAGA TTCGTTGACGTCCCTGGAACGATGCAGGAAACCCGTCATTGCCAGTATACATGGAGCTTGCATCGGTGGTGGAATTGATA TCATAACCGCCTGTGACATAAGGTTTTGTACGAAGGAGGCGTTTTTCTCGGTGAAGGAGGTGGATTTGGCCCTGGCGGCT GATCTGGGAACTCTTCAGAGGTTGCCCATGATTGTCGGTTTCGGCAACGCCATGGAGTTGGCTTTGACGGCTCGCAGGTT CTCAGGTTTGGAGGCCAAGGAGTTGGGTCTCGTTTCTCGGGCTTTCGATTCCAAACACGACCTAGACGAGGGCGTCTACC AGGTCGCTCAGGCAATTGCTACCAAGTCTCCCCTTGCGCTTATTGGGACAAAAACTGTGTTGCTTAGAAGTAGGGACTTA ACTGTGGATCAAGGCTTGGATTATGTTGCAACCTTGAATTCTGCCAGATTGTTATCTGCTGATTTAACTGAAGCAGTTAT GGCACAGATGCAGAAGCGGAAGCCACTTTTTTCAAAGCTCTAA
Protein sequence (LotjaGi5g1v0366200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVKYKTLEIVPKSGSGSGSGSGSGSGVWYLTLNRPSQRNALSDDFFCEFPKALCALDHNPNVNVIVLSGAGNHFCSGID LSLLKSTSTTGANGGESLRRQILAMQDSLTSLERCRKPVIASIHGACIGGGIDIITACDIRFCTKEAFFSVKEVDLALAA DLGTLQRLPMIVGFGNAMELALTARRFSGLEAKELGLVSRAFDSKHDLDEGVYQVAQAIATKSPLALIGTKTVLLRSRDL TVDQGLDYVATLNSARLLSADLTEAVMAQMQKRKPLFSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 280 | 277 | 7.2E-109 | – | |
| PANTHER | 4 | 280 | 277 | 7.2E-109 | – | |
| Gene3D | 20 | 221 | 202 | 3.9E-63 | – | |
| Pfam | 25 | 278 | 254 | 7.0E-45 | ||
| SUPERFAMILY | 26 | 278 | 253 | 5.86E-74 | ||
| CDD | 28 | 219 | 192 | 1.64925E-64 | – | |
| ProSitePatterns | 120 | 140 | 21 | - | ||
| Gene3D | 222 | 280 | 59 | 1.9E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0366200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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