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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0009500 |
| Transcript ID | LotjaGi6g1v0009500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ammonium transporter; TAIR: AT4G13510.1 ammonium transporter 1;1; Swiss-Prot: sp|P54144|AMT11_ARATH Ammonium transporter 1 member 1; TrEMBL-Plants: tr|Q9FVI4|Q9FVI4_LOTJA Ammonium transporter; Found in the gene: LotjaGi6g1v0009500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1773093..1776879) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTTCGCATAGAAAATCTCATTTAACAACCCTATAAACACAACAAGAAATGATTCCGACATAGAGCAAATTCTCGAC TAATTTTCGCCCACCTAGGCAGTGTTAAAAGCTTTAAAATCACCAAATCCAAGACCATCATCAATCTTATAACGACTAAA GTTCTTCAATTTAGTCTAGTGTAGGCCACAACGGGAAGCATTCCCGCCCTAGATTTGATAAGAACCCCTACCCATGACTT CTCAGCACTTTCCATCCTTAAGTTCGTTCGAGACTCTTTCCTTAACAAAATTATAAATGTGGAGAGCGATAAAAAAAACA AAAGTATTCTACATTTGCGGTGCAGACGTACGTTTTACAGTAACAGAAAAAAAATCTAGATGTCAAAGTTTGAAAAGTCT TCTCTTCTCTTCTCCACTCCTAAAGCAAAGTCAGTCTTCATAAAAAGTTAGAACTTTGGTGTTCCCACTCTCCCTCTTTC TCTATATATCCTTTTGTGTACGAACCAAAACGCGCATTCAACTGAATCCACAAATCATTACACCCTCCCTCTTGACTCTT GACTCTCCCTTCTCTTTCCAAGTCCACTACCCCAAAACGATGGCGCTGCCGGAGTGCTCGGCGGCGAACCTAGCGCAGCT CATCGGCCCCAACGCGACAGACGCCGCCGCAGTCGCCGGATTCATCTGCGACCAGTTCACCGCCGTGGGTCAACGATTCT CCGACACAGCATTCGCGGTGGACAGCACCTACCTCCTCTTCTCCGCCTACCTCGTATTCTCGATGCAGCTCGGCTTCGCC ATGCTCTGCGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGG CCTCTTCTACTATCTCTTCGGTTTCGCCTTTGCCTTCGGCGCACCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCC TCAAAGACGTCCCCACCGTAGCCTTCGACTACAGCTACTTCCTCTACCAGTGGGCGTTTGCCATCGCCGCCGCCGGGATC ACCAGCGGCTCAATCGCTGAACGCACACAGTTCGTTGCCTACCTCATCTACTCGTCGTTCCTCACCGGGTTTGTCTACCC CGTCGTGTCTCACTGGTTCTGGTCCGGCGACGGTTGGGCCAGCGCCACCAACACCGGGAACTTGCTGTTTGGCACCGGGG TGATTGATTTTGCCGGGTCGGGTGTGGTTCACATGGTTGGTGGTGTTGCGGGTCTTTGGGGCGCGCTTATTGAGGGACCC AGGATTGGCCGGTTTGACCATGCCGGTCGAGCCGTTTCGCTTCGCGGACACAGTGCTTCGCTTGTTGTGCTTGGAACCTT CATGCTCTGGTTCGGTTGGTACGGTTTTAACCCCGGTTCGTTCACCAAGATTCTCAGCGCCTATGATTCAGGTAACAGCT GGCTCCAATAAAATACTACGTTTCATTGATTTTGGATCTTAGTAATCATGCTCATCAATCAATTATGAAATTGAAAATTC TTGAGTTGAATTGAAATCATGACATTTGTTTAATGGATGGATTGATAGTTTCAAAAGCTGAATATCTGGTAAAAGTTTAA TTATTTATTTATTTCCCCTAAATATTATATTGGCTGGGATTCAGTACTGGTTTGTTTTAAACTAATATTAGTACTCTTAA TAAAACATTAATTGTCAATTCTAAAATTCAATAATGTTGATTGTTGAATTTTTTTTTTATTAGCAAAGAACTATATTAAT TATGAAACTAGTATTTAGCTTGAAAATTGACAGAAAATCACATGGTGTTCTGTTTTTTTTTTTCTTCCTTATTCTTTCTA TCACACACATCGGTGAAACCCACTCCCACCCCTGTTTTCCATCAAATCCGTGATTGTTGAGAGATCTTTATCATAACCCA TGCAATTGGTATGACTGCAATTAATTCAAAACTCCTAAAGAGTAGTTTTGAAGTATTGATTTTTTAGTGTGTTAAATAGC TCTCACAAATTCAATTTAGGAGGTCTTTTAAGAGTGTGATTATAGGAATAGCCAATAGGAATTCAATTGTTCAAACAGCA ACTTTTTTTTAGTAGTGTATCTGTTGAGTTTTTGAGAAATGATTAAACAATTGAGCATAATTATCAATGCACTTTTTAGT AGTGTATCTGTAGTAATATATTAATAATACTTTGGTTCATTTTTAGCAGCAAAAAATACGAGCTTTTAGAAAGAAAAAAA ACTTAAGATTAAGATTGTTTGGAAGTTTTAAAAATATTCCAAATCATGCAAAACAACCAAAAAAAAATCACAAGAACAGT TGCTAAATTAAAAATAAAATAGTCAAAATTCGATTAATAAATTCAATTTTATAAAATAATATATCTTCATATTAATTTCC AGTTCTATTAACTGTGAATTCGTTTGGGATTAATTTTTTCAGGCAACTATTATGGTCAGTGGAGCGCAATAGGAAGGACC GCCGTAACGACAACATTGGCTGGCTGCACGGCGGCGCTGACCACCCTTTTCGGGAAAAGAATTATCTCCGGCCACTGGAA CGTCACCGACGTATGCAACGGCTTACTCGGCGGGTTCGCAGCAATCACCGCCGGTTGCTCCGTCGTGGAGCCCTGGGCAG CCATCGTGTGCGGCTTCGTCGCCGCAGTGGTGCTTATCGCGTGCAACATGCTCGCAGAAAAGGTGCGTTACGACGACCCC TTAGAGGCAGCTCAGCTTCACGGCGGTTGCGGCGCGTGGGGGATCATATTCACCGCGCTATTCGCCAAGGAGGAGTACGT GAACCAGGTTTACCCGGGTAAACCGGGTCGGCCATACGGGTTGTTCATGGGTGGTGGAGGGAAGCTGCTCGGAGCGCACG TGATCCAGATTTTGGTGATTATCGGGTGGGTCAGCGCCACAATGGGTCCTCTGTTCTTCATTCTGAATAAGATGAAGTTG CTTCGGATCTCAACGGAGGATGAACTTGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCATATGCATATGAGGATGA TGAATCGCACAAGCCAGGGATTCAGCTACGGAAGATTGAACCTAACTCTTCTTCCACTCCTAGTGCTGAGTCATGATAAT AATTAGTAGTAATAATTTCGTTTTGTATTTTTCCACTCTTTGTGTTCTAGATATTTTTCTTTCTTTTCTTTTGTAGTAGT AGTTTGTACGGGCATTGTAATTTGTATTGGTCCTACACCTACATTTGTGTGCTGTGCTGGATTCTATACAGCGTTGATGA AAATATAAAAGATAGGTGAATTCTACCGTACCCTCTTTGTATGGTACATGACTGATGCGATTTGACGTATACTAATAGGA AACCGACATCTAGCAGTGTATTTGAAATTTTTATTCATTTTAAAACATATATAGTAAAAAGAAGAAACACTCACTTAAAT GTGATTGGTCCACGTCACGTCTTGTATCATACCCCAACAAAGTGTTGACGTATCCTAGCAAGCACCAAAAAGAAAACACG AGAGGTTTGGTGGGTGGTTGTTGACTAATGGAGGGTGTTGGAGATGACAAAAACGGCACTAAAGAGTAACAACCACTACT GGACACACCCCACTTAGCGGCAGTTTTAACCTCTACAAAACCTTGCGGAAGATAAAAATTGTCGCTAAGTGAAGTGTATG CAAATGGTACATTGCTGTTGTTAGTGAACTACTCCCTCCGTTCCAAAACTATTGTAGTTTTAACTTTTTTATTTTGTTCC AAAACCATTGTTGTTTTACATATCCAA
CDS sequence (LotjaGi6g1v0009500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCTGCCGGAGTGCTCGGCGGCGAACCTAGCGCAGCTCATCGGCCCCAACGCGACAGACGCCGCCGCAGTCGCCGG ATTCATCTGCGACCAGTTCACCGCCGTGGGTCAACGATTCTCCGACACAGCATTCGCGGTGGACAGCACCTACCTCCTCT TCTCCGCCTACCTCGTATTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAAAACACCATG AACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTATCTCTTCGGTTTCGCCTTTGCCTTCGG CGCACCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAAGACGTCCCCACCGTAGCCTTCGACTACAGCTACT TCCTCTACCAGTGGGCGTTTGCCATCGCCGCCGCCGGGATCACCAGCGGCTCAATCGCTGAACGCACACAGTTCGTTGCC TACCTCATCTACTCGTCGTTCCTCACCGGGTTTGTCTACCCCGTCGTGTCTCACTGGTTCTGGTCCGGCGACGGTTGGGC CAGCGCCACCAACACCGGGAACTTGCTGTTTGGCACCGGGGTGATTGATTTTGCCGGGTCGGGTGTGGTTCACATGGTTG GTGGTGTTGCGGGTCTTTGGGGCGCGCTTATTGAGGGACCCAGGATTGGCCGGTTTGACCATGCCGGTCGAGCCGTTTCG CTTCGCGGACACAGTGCTTCGCTTGTTGTGCTTGGAACCTTCATGCTCTGGTTCGGTTGGTACGGTTTTAACCCCGGTTC GTTCACCAAGATTCTCAGCGCCTATGATTCAGGCAACTATTATGGTCAGTGGAGCGCAATAGGAAGGACCGCCGTAACGA CAACATTGGCTGGCTGCACGGCGGCGCTGACCACCCTTTTCGGGAAAAGAATTATCTCCGGCCACTGGAACGTCACCGAC GTATGCAACGGCTTACTCGGCGGGTTCGCAGCAATCACCGCCGGTTGCTCCGTCGTGGAGCCCTGGGCAGCCATCGTGTG CGGCTTCGTCGCCGCAGTGGTGCTTATCGCGTGCAACATGCTCGCAGAAAAGGTGCGTTACGACGACCCCTTAGAGGCAG CTCAGCTTCACGGCGGTTGCGGCGCGTGGGGGATCATATTCACCGCGCTATTCGCCAAGGAGGAGTACGTGAACCAGGTT TACCCGGGTAAACCGGGTCGGCCATACGGGTTGTTCATGGGTGGTGGAGGGAAGCTGCTCGGAGCGCACGTGATCCAGAT TTTGGTGATTATCGGGTGGGTCAGCGCCACAATGGGTCCTCTGTTCTTCATTCTGAATAAGATGAAGTTGCTTCGGATCT CAACGGAGGATGAACTTGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCATATGCATATGAGGATGATGAATCGCAC AAGCCAGGGATTCAGCTACGGAAGATTGAACCTAACTCTTCTTCCACTCCTAGTGCTGAGTCATGA
Protein sequence (LotjaGi6g1v0009500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALPECSAANLAQLIGPNATDAAAVAGFICDQFTAVGQRFSDTAFAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM NIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKDVPTVAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA YLIYSSFLTGFVYPVVSHWFWSGDGWASATNTGNLLFGTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVS LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYDSGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIISGHWNVTD VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNMLAEKVRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQV YPGKPGRPYGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFFILNKMKLLRISTEDELAGMDLTRHGGFAYAYEDDESH KPGIQLRKIEPNSSSTPSAES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 50 | 50 | - | – | |
| PANTHER | 5 | 495 | 491 | 3.0E-280 | – | |
| PANTHER | 5 | 495 | 491 | 3.0E-280 | – | |
| Gene3D | 29 | 491 | 463 | 2.3E-144 | ||
| SUPERFAMILY | 47 | 453 | 407 | 8.63E-101 | – | |
| TIGRFAM | 48 | 472 | 425 | 8.7E-145 | ||
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 51 | 74 | 24 | - | – | |
| Pfam | 51 | 472 | 422 | 5.2E-137 | ||
| Phobius | 75 | 94 | 20 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 95 | 114 | 20 | - | – | |
| Phobius | 115 | 133 | 19 | - | – | |
| TMHMM | 134 | 153 | 20 | - | – | |
| Phobius | 134 | 152 | 19 | - | – | |
| Phobius | 153 | 158 | 6 | - | – | |
| Phobius | 159 | 181 | 23 | - | – | |
| TMHMM | 160 | 182 | 23 | - | – | |
| Phobius | 182 | 200 | 19 | - | – | |
| Phobius | 201 | 224 | 24 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| ProSitePatterns | 203 | 228 | 26 | - | ||
| Phobius | 225 | 244 | 20 | - | – | |
| TMHMM | 245 | 263 | 19 | - | – | |
| Phobius | 245 | 263 | 19 | - | – | |
| Phobius | 264 | 341 | 78 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| TMHMM | 321 | 338 | 18 | - | – | |
| TMHMM | 342 | 361 | 20 | - | – | |
| Phobius | 342 | 362 | 21 | - | – | |
| Phobius | 363 | 373 | 11 | - | – | |
| TMHMM | 373 | 392 | 20 | - | – | |
| Phobius | 374 | 392 | 19 | - | – | |
| Phobius | 393 | 419 | 27 | - | – | |
| Phobius | 420 | 445 | 26 | - | – | |
| TMHMM | 423 | 445 | 23 | - | – | |
| Phobius | 446 | 501 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of LotjaGi6g1v0009500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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