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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0012700 |
| Transcript ID | LotjaGi6g1v0012700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, putative; TAIR: AT3G24040.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|A0A072VHX3|A0A072VHX3_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi6g1v0012700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2361956..2366375) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGGACAAGAAGAGAGACACATGGAAAACAAACCCACCAGACACCATAGGTAGTGCCATGAGATTCTACTAGAGAAGA AAGCAGAAATCAGAGGGAAGCATCCAAAATGCAAAATCCAGATTCACCACCACCACCACCACCAAACCATTGGCCTTCAC TTTCAAGTTTCAATCTCAGAGATTCAAAACCAAAACCCATCCTCCTCCTCCTTTACACCTTCCTTGTCATCTCCCTTCTC TCCCTCACTTTCATCCTCTCTCTCTCCTCCTCCTCTTCTTCATCATCTTCCCCACATTCCCAACCCGACCCGTTTCTCCA CCCGACCCACCGCATCATCTACGACCAGGACAAAGCCACCCCTCCTCCTCCCTCCATCGCCTACCTCATTTCCGGGTCAC AAGGCGATTCGGGTCGGATCCTCCGGTTACTCTCCGCCGTCTACCACCCATTGAACCACTACCTCCTCCACCTCGACCCT TCTGCTCCTCACACCGATCGTGAAAAGCTGGCCCTCACTGTTCAGTCCAACCCCATTTTCAAAGCTGCCCAGAATGTCCA TGTCATGGGAAAACCCGATTTTGCATACCCGAAAGGCTCTTCACCCGTTTCCTTCACCCTTCATGCTGCTTCCATTCTGC TTCGGTTGTCCCTCAAATGGGATTGGTTTGTTACTCTCAGTGCTGATGCTTACCCTCTCGTTACCCAAGATGGTATGGTA TGGTCAATTTTTGCTTCCATTTCTTTCTTTTTTTGGTTTCACCTTTCAATTATGTGTATCTGAATGTGTTTTTTATGCTG AATCTTTTCTGGGTGTGCCAGATCTTCTCCACATTATGTCATTTCTGCCTAAAGATATGAACTTTGTGAACCATTCAAGC TATATTGGATGGAAAGAGTAAGCTAATATTCCTGTTTTTTTAATAGTCATTAAGGTTTTGCATAGGGAATCAGGGTGTTA AAGTTGTATGTATGGACTATGGAGATGATACTTATTTCCATATCTTGTGATGATGCTTTAGGTTGAGGAAGTTGAAACCC ATTATTGTTGATCCTGGTCTATATCTTTCTGAAGGGACTGAAATGTTTTATGCTACACAGAAGAGGGAACTCCCCAGTGC TTACCGTTTGTTTACAGGTATGCATGACTTTACTTGTATGTATCTAGTCTGTGCAGAGTTTTGGTTTTGTGGTTTATTTG ATTAGAGAGTGAAAAATAGGTCTAGCTGTGATGATAGTGTTGTGGTAGATGACGGGGCATTCATAGAAAACAATGATAAG GTCAAGATAGAATGATTTTAGGATACAATTGGAGTAGCGTATAATGCGGAGATGATGGCAGCAATTTACGTAAGGTGGGC TGGACATGTGAGGAGTATACCAACAGAGGCTCCACTCAGAAATGTGGATCAGATTGAAAACGTCCAATTAAAAGAGGCAG AGTGACTGAAGAAAACCTGAAGAGAAATCATTAAAGGAAAGACCTTGCTTTGAAATTTGAATGGATTTATTTGAAGTTTG GTTTTAATAAAGGATAAAGACATCAATTTATCTGTTTGTAGCTGAAGATATTTTAGTTTTGATAACATTGTTGACCCAAG ACAAGTGAGAGAACCTTAGTTGGATGAACTATTTTCCATTCTTAGGTTTTGAATTTACTCAGAACAAAGGACTTGTTTGT GGTGCATCTAGTTGGCATTAGTTTTGAAGGCCTGAAATTGCTGAGAGCCCGAGACTTCATTCAGATGTTCCTTAGTGCCC TAGGATGTCATGGATGCTATGGGGTGTTTTGATACCACGAGATAGAGTACTGCTGCAAATCCTTTCAAGTTACGTAGTTA CTAAAGGCAATTTACGTGCAGCTATTTTCACCATATGAACTAATGTCTTTGGTAATTTGCTTAGGAAAATCTGGTTACTT GAGGCATTGGACCATGTATGGCAAATCGGCATATCTATAGTTAACTAGATTTTAAATTGGAAGGTAATTAATGGGGCGGT CAAATACTAAATAAGGGTTTGAATTTGTTCTGCACCTTCGCTGAGATTTCTGGACTGCATTGCTAAGAAAGTTTTAGGCT TAGTTCATTATATAAGCAGCATCAATAGTCATAAATATTTAGTTGATTCAGTAGCAAATGGATAAGTTGCACTAAACAGT AAACAAGAAAGTTGCACATAATAGTAGTAGCTAAAGCTTTTAACTTGCAATAGTTGCTTTTAATGGTTTTTAAACACATG GCAGATAGCCACATATAGCTATTTTATCATTGTACTACCATTAAATCCAAATTTAACTATCATACTCTTTAAAATCTAAA CAAATACTGTACAACTACAACAAAGCCTTATTCCCACAAAGAGGAGTTGGCAACCTGGATTATTGTTTCCCTGATAGGGA AAACCCCCCATGGGTCCATGTCTACTGCAGTTAAGAGAAGTTAGTGGATCAGAAGCTGTTGGGGTAGTTATTGGGTTAGT TATTATTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCAAGGGGTGGTTATTAAATAGGAGTTGT GGCTGTTAGTTTAGACATTCAGAAATTCAGAAGTGATTTAGTAGGGAGAGAACTGGCTCTCGAATTCCAGAACTAGGAGA GGCTGGCTCTCGAAAACCACTGCGTGTATATTTTTATTCAGTAATTCCAATCAGTTCTTATCATTCCCATTGTATTCATA ACTGTGACAGAGATTCACAGGGCCTGCATGTACCCTTTATTCTTCATAATGGGGTCCAACTAAGTTGTTTTTAGTAACTC TACCATCTTTGAGTGACATTGTCTGTAATTGCCTTGTTGTGCAGTTTCTCAAAAAATTTCCTCTACAGGAACCACTCTGA CCAGCTTCCTGAAGCTCCCATTCCTAATCATATCTATCCTGACATGCCCACTCATCTATTGCAACATCGTCATTTATGAG ACCTTCATCTTTGTTTGGAGGGTCTAACAGTGGTTTAATAAGGCTTCCCCTTCAGTTTTATAGGCAGTCTATGCTCACGC AAAATACCTATCATGCATATTAGGGTATACATTATGTTTTTGCTTCTAAATGTTTTGCTTGTGATTACTTTAAAGGAGTT ACTATTTTGGATATGCCAAAAGACGTGGCAGCCTTGTTGCATTATTGAGTTTTTCTTTATGTTACTTTTTTGTTCTATTT TCTCTGTTTCGGATGATATTTAATATGCTCTGTTTTTACTTGCCTCTATTCTCACCAATAAAATTTCTTTTCCTGTCAAT GGAAAAATTTAAATATATCTTACTTAATATTTTCTTGTGCAGGTTCATCTTTTTTTATCTTAACTCGCAGTTTCATGGAG TTCTGCATCTTGGGAACAGACAACCTCCCAAGGACTCTACTGATGTATTTTGCAAACACTCCTTCTTCACTGTCCAGCTA CTTCCCTACAGTTATCTGCAACTCGCGCCAGTTCAACAGGACAGTGATGAATCATAACTTATTACATGCTATTTATGAAA CCCGCAGAAACTATCTTCGGCCACTCAATTCCACTGATTTTGATGACATGATTCGCAGCGGAGCTGCCTTTGCTCAGAAG TTCCAGCCAGATGATCCTGTGCTTGATCTCATCGACCTAAAAATCTTGGGCCGAAGTCCTAGATCTGTTGTTCCTGGTGG ATGGTGCTTAGGTGAGCCTGGAAACAGCACATGTTTAACATGGGGTGATGCTAAGATCTTGAGACCTGGCACAGGCTCTC AACGTCTCGAGAAAGCCATTGTTGAATTTCTATCAAACGGCACTTTTCGATCTCATCAATGTACATATGAATGATGATTG ATTTGACTCTAGCAACATGTCACACAATGTAACAGAAACACACCGTGAAAGAAACTCGAAGGGCCTGGTGGGAGAACTTT AAGAACCAACAGCTTGGCATTTGCCTTATCTATTGGAAACTCTGTATATGGGATTTTTTTGGGTGGTGAGTATTGATTCT GTTAACAAAATTAATAGTATGTTTGAATTATAGCTTCTTTTTCATCAGAACCAATTCTGGTACCTAGAAGCTACTTAGAG AAGCTTCTTCTGAATTTTGATTTTGGCTCTAATATCAGTTGTACGATTTCCAAACATGCACTTAGTTTTGCGAATTCTGA TTGGCTGTGGAAGTTAGTGTAACTTGTATGTTCAAATTTGGTGCTATCTGTTGCCTTAGAGATGTTTACTTCATCCTTGT ATGCTGAAAAGTGAATCAAACATAATCTAGGTGGGAATTCTTTCTAATCCTCCTCTTGAATGTGCCAAGATGTTAATTGC TTTAAGCAGGTGTTTGGTATGTAGAGTTTATCCCATTCTTAGAATCATGTTTTTGTTATTTAGAGTGTATTTTGGATAAC AACTTAATAATTAAAACGCT
CDS sequence (LotjaGi6g1v0012700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAATCCAGATTCACCACCACCACCACCACCAAACCATTGGCCTTCACTTTCAAGTTTCAATCTCAGAGATTCAAA ACCAAAACCCATCCTCCTCCTCCTTTACACCTTCCTTGTCATCTCCCTTCTCTCCCTCACTTTCATCCTCTCTCTCTCCT CCTCCTCTTCTTCATCATCTTCCCCACATTCCCAACCCGACCCGTTTCTCCACCCGACCCACCGCATCATCTACGACCAG GACAAAGCCACCCCTCCTCCTCCCTCCATCGCCTACCTCATTTCCGGGTCACAAGGCGATTCGGGTCGGATCCTCCGGTT ACTCTCCGCCGTCTACCACCCATTGAACCACTACCTCCTCCACCTCGACCCTTCTGCTCCTCACACCGATCGTGAAAAGC TGGCCCTCACTGTTCAGTCCAACCCCATTTTCAAAGCTGCCCAGAATGTCCATGTCATGGGAAAACCCGATTTTGCATAC CCGAAAGGCTCTTCACCCGTTTCCTTCACCCTTCATGCTGCTTCCATTCTGCTTCGGTTGTCCCTCAAATGGGATTGGTT TGTTACTCTCAGTGCTGATGCTTACCCTCTCGTTACCCAAGATGATCTTCTCCACATTATGTCATTTCTGCCTAAAGATA TGAACTTTGTGAACCATTCAAGCTATATTGGATGGAAAGAGTTGAGGAAGTTGAAACCCATTATTGTTGATCCTGGTCTA TATCTTTCTGAAGGGACTGAAATGTTTTATGCTACACAGAAGAGGGAACTCCCCAGTGCTTACCGTTTGTTTACAGGTTC ATCTTTTTTTATCTTAACTCGCAGTTTCATGGAGTTCTGCATCTTGGGAACAGACAACCTCCCAAGGACTCTACTGATGT ATTTTGCAAACACTCCTTCTTCACTGTCCAGCTACTTCCCTACAGTTATCTGCAACTCGCGCCAGTTCAACAGGACAGTG ATGAATCATAACTTATTACATGCTATTTATGAAACCCGCAGAAACTATCTTCGGCCACTCAATTCCACTGATTTTGATGA CATGATTCGCAGCGGAGCTGCCTTTGCTCAGAAGTTCCAGCCAGATGATCCTGTGCTTGATCTCATCGACCTAAAAATCT TGGGCCGAAGTCCTAGATCTGTTGTTCCTGGTGGATGGTGCTTAGGTGAGCCTGGAAACAGCACATGTTTAACATGGGGT GATGCTAAGATCTTGAGACCTGGCACAGGCTCTCAACGTCTCGAGAAAGCCATTGTTGAATTTCTATCAAACGGCACTTT TCGATCTCATCAATGTACATATGAATGA
Protein sequence (LotjaGi6g1v0012700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQNPDSPPPPPPNHWPSLSSFNLRDSKPKPILLLLYTFLVISLLSLTFILSLSSSSSSSSSPHSQPDPFLHPTHRIIYDQ DKATPPPPSIAYLISGSQGDSGRILRLLSAVYHPLNHYLLHLDPSAPHTDREKLALTVQSNPIFKAAQNVHVMGKPDFAY PKGSSPVSFTLHAASILLRLSLKWDWFVTLSADAYPLVTQDDLLHIMSFLPKDMNFVNHSSYIGWKELRKLKPIIVDPGL YLSEGTEMFYATQKRELPSAYRLFTGSSFFILTRSFMEFCILGTDNLPRTLLMYFANTPSSLSSYFPTVICNSRQFNRTV MNHNLLHAIYETRRNYLRPLNSTDFDDMIRSGAAFAQKFQPDDPVLDLIDLKILGRSPRSVVPGGWCLGEPGNSTCLTWG DAKILRPGTGSQRLEKAIVEFLSNGTFRSHQCTYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| Phobius | 31 | 52 | 22 | - | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| PANTHER | 34 | 433 | 400 | 1.4E-190 | – | |
| PANTHER | 34 | 433 | 400 | 1.4E-190 | – | |
| Phobius | 53 | 435 | 383 | - | – | |
| Pfam | 90 | 331 | 242 | 1.9E-50 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi6g1v0012700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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