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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0015600 |
| Transcript ID | LotjaGi6g1v0015600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1; TrEMBL-Plants: tr|I3SYZ7|I3SYZ7_MEDTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0015600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2757734..2766479) extracted from Lotus japonicus Gifu genome v1.2.
TAATTATTGGAAACGTTTTTTTCACAATAATTAGGATGGATAAAATCCCAATTCAAATGGAATGGGTTTAAAATGATGTT ATTGTATAGATCGGGCTTATAAATTTTCTCATTTTCGTCCATTAAATAATATTTAATTACTTGAAAAGTTTCCTTGAATT CGTTAAGTTGCAAATTTTTCTTTATTGATATGATTTTATTATGAGTTATTAAATGGTAAAATGAATAAAAATTTGCAATT TGCGGGGCTACTCCTAAGGGGCCCAACGAAATTTTAATTAGAATTTTATGATTTCTTTTAAATTGATTAATTTCTTCTCT AATCCCATTGTGATATTTTACATGTGGTCAAAGGACAAAAAAAAAATATCATCTCATTTGTTACTCTCTTTCTTTCTTTT TTCTACCTTTCATTTCATTTTCTTTTTCTCACTTTTCTTTCATATACCAACATGCCTATAAAAAAAACAACCAACATACA CTGAGTGTATCTGGTGTCCCAAAAAATGTGTATCACCATTTATGATAATTAATAAATTCAGCTTGTGGTTGAATCTTTGC AACTGCATTTGATTAATTAATTTGGAATCAATTGCCAATCCAAACGACAAAGCAGCCTTGATTGGTGACCCAATTGGAAT TTGAAAGATCTAACAACATACATAATTCCTAGGAAGAAGGTGACAATGAAACAAAATCAAAAATTAAAAATATCTGTCAT ATCTGTTCATTCCCATTTTCCTCAACCAAAACGCCTCTTCCTAGCTATCCAAATCCAAAACGCATACCCAAAAACCATGC CATCCCCATTATCTCTTTCTCATACATACAATACAAATGTCTTTATCATCAAGTTGCCTTCATGCAAAACCCCTTCACAG TCCTCTCATTTTATCTAACTCCACTAACAACAGAACCAACATCATGTAAAACTCCTTTCAAAAAACATCATGTAAAACTA AAAGAAAAATGAAATGAGTAACTGAAAACCCAAAAAATAAACCCTCACATTTTCCATCTTCACTCACTCACTCTCTTTCA TTCATTCATTCCCTTCCAAATTCCAATCTTCCATCATTGAATCATATCAAAATTTTAGCATAAACTGTTGCATGCTCATT CAAAACCAAAAACATCATCAAAATCCAATGTTGTCATCACCTATTCTTGTCTCCTTCACTCTCATCCTCTCTCTCCCTAT CCTTCTCTTCCTCTCCCCACAAACCCTCCCCTCACCCTTCACCTCCGACGCCGACGACCTCTACCTCTTCCACCGCGCCT CCGCCGCACGCGCCACCACCACCAACCCCAAACCCAAAATCGCCTTCCTCTTCCTCACCAACTCCAACCTCACCTTCGCC CCACTCTGGGAGAAATTCTTCACCGGCCACCACCACCTTTACAACATCTACATCCACGCCGACCCCTCCTCCGCCGTCGT CTCTCCCGGCGGCGTCTTCCACCGCCGCTTCATTACTTCCAAAAAAACCTACCGCTCCTCCCCAACACTCATCTCCGCCA CCCGCCGCCTCCTCGCCTCCGCCGTCCTCGACGACCCGCTTAACGAGTACTTCGCTCTTATCTCCCAGCACTGCATTCCG CTCTTCTCGTTTCGATTCGTTTACAACTCTCTCTTCAAGAACCGGCTAGCCTCGCTCGCCGGTTCTAGTTTCCGGTACCG GAGCTACATCGAGATTATCTCCGATGAGTTGAACCTCTACGACCGTTACACAGCGCGCGGCGAGAACGTGATGCTGCCGG AGGTGACGTTCGACGCTTTCCGGGTCGGGTCACAGTTCTTTGTTCTGACCCGGCGGCATGCGGTGGTTGTTCTCCGGGAT CGGAGGCTCTGGAGGAAGTTCCGGCTTCCTTGCCTGACGGAGGAGCCGTGTTACCCGGAAGAGCACTATTTTCCGACGCT GCTTTCCATGGAGGACCCGAACGGCTGCACCGGGTTCACGCTCACGAGAGTGAACTGGACCGGTTGCTGGGATGGCCACC CGCACCTTTATACCCCGCCGGAGGTCTCGCCGGAGCTCGTTCGCCGCCTTAGGGAGTCGAATTCCAGCTATTCCTACCTC TTCGCGAGGAAATTCTCGCCGGAGTGTCTCACGCCGCTGATGGACATCGCCGATGACGTCATTTTCCGGGACTGAGTTGA GCTAAGGTAAGTGAAGTGTAATTTACACACTCTAGTTTGTGGCAACTTTTCCTTTATCTTTTTTAAATCATATATTTTAT TCTCTATTTTTTTAATTGTTAAGTTTTTTTTTCTTATTTTTAGTGTCACTGTCTAATTTTGGTGCTTTTGGTTATGGATA TGCATAAATTAGCTTTGACATTTTGCATAAAGAAAAAAAAACATTCCACAATTGGCTAATGGTTATGACCTAATTTGAGT AAACAGTCATTCTGGTCCTTGAATGTGTTCACTTATGACGGAGTGGTCCTCAGACTTTGGAAATGGGCTTTTTTCATCCC TGAATGTGTTGCCGTCGGTCAAGTTAGTCCTTGGTTCAGTTTTCCGTTAGTCCTTGAGACGGAAAAGGTCAAATGTCACG TTTTTGCCACATTAGCTTGACACATCATCAATGACTCACATCTTATTATGTCAATTTAGTCCCTCAGAAAATTAAAAAAT AAAAACTCTGAATTTATTAATTCAAATGACAAAAAATCACTCAATCATCATCTTCAACCTCATTTTCATCTTCATCATCA ATCTCACATTCTTCTTTCTATCATTTCCAAAAAACAAAACACAAAATCCTCAAATCTTCATCCTCCATGGAAATAAACTA CAAACGAGATCAGCAAAATTAAAAACAAAAAAAAAACAAAAAAAATTGTATCCAAAAATTGTAACCAACATACCCTAATT CTCATTTACATTACAAAATTTCCCCCAATTTTCCCCAATCTCTGAATCAATCTGTTACTTTCCCCAGCGAGGGTGTTTCT CAGCTTGCAATTGGTCAAGTTCCAAACCTTGACGGTTCGGTCCCAGGAAGCAGAAACTGGCCATCAGATGAGAGGACGAC GTCCTGACCAAAGTGGGAATGTCCGGTGAGGCGGCGGCGGAGGACACCGTCGCGTTTGGGATGATGGATTTCGCCATTGG AGGAGAGAAAGGGAGAGGAATTAGGGTTTTGTTTAGGGAAGAAAAGGGGAAGTGGTGATAGAGAAGAAGAGGGAGAGAGT GAGGGTTTTGAACCTGTGGTGGCTCTGGCCTTGACACGATCGAGCATCCGCTTGCTGCTCTCTTTGGAGTACACCTAGAG GATCTCGATGCAGTCGGTATCAGCAGCGGTGGAGCCACCAGCGGCAGCAAAGGCCTCATCCTCGATCTGGCGAGCAGCAG CGGAGGCCTCGTCAGCAAAAAAATTGTTCGCTCGTTTCATCTCGTCTACATCGATCCAAGCTCTCTCAATCTCGTTCTGG CTCTCTGGGGATTTGATTTGGAGATTTGATTAAGTTGGGTGACATGGAGATGCAATTAATCTCTTGAGAGATTGAAGGTT GTGAGGGCGGTGGGATGGATTTGGAGAGATTTGTGGTAGTTGTGAGAGATGTTTGGAAGAAGAGAGCGTTTGGTGTGTGA GATTCTGCAACTTTCATCTATGCAGGAAGACAGAGGTTGATAGGATGAGAGGGGACGAAGATGAGCGATGAATAAGGGAG AGTTTTTGTTTTTCAGTTCAGAAATTAAGGATTAAAAATAATTAGAAATTAGATGTGATATTGAAATGTAACAGAATAAG GGGAAAAAAATTACAAATCAGCTTAAATTGGTTGATCTTGGATTCATTCATTGGTTACTGGAATGAAACAAAGAACAAAC TAGTGTCAAGATGAATTTTTTTAAGTGAAAATTTGAATTAATAAATTCAGAGTTTTTTTTTTTAATTTTTTGAGGGGACT AAATTGAAATAATAATAAGATGTGTGTAATTGATGACGTGTCAAGCCATGTGGCAAAAATGGTGACATTTGACATTTTCC GTCTCAGGGACTAACGGAAAACTGAACCAAGGACTAACTTGACCGACGGCAACACATTCAGGGATGAAAAAAGCTCATTT CCAAAGTCTGAGGACCACTCCGTCATAAGTGAACACATTCAAGGACCAGAATGGCTGTTTACTCGATTGAAAGTAGAAAC CGCAGAATCCATTTGTCACAAGAGAAAAAAAGGCTTGATAGTTTAAGGGTTAGTTATTCTGATTTTTTACTAATAATATC AGCTTCTCAACCTCATAATCAATTCTCTAACCTAGAAGAAGTGCATGTTTGGATAGATGGTTAAAAATCATAATAAAGCC AAAATCACGGTATTATTCACAATTCACATCTGTAAATGCTAAGGAAAATTACTTCTGTCCACCATTATTTTAGCTAGCTG ACTGTAGTGTTACACATAGTATCCAAACATGCATGAAATTGTGAATGTGAGTACAATGAGATAGGGAGAGAGATACATGA TCGGATATTTGATGGAAAGAATGAAAGTGATTAAAGAAAGTGTAAAGTGAGTGGGAGAGCAGTATGAAAAATTCTCATTC AATCCCGTTCCTTACATAATGACAAAAAAGGGTATGGTTTTTCTCTTATAATTTATACACTTTGTGTGGTAGATATTACA AATACAGGCTGTCAGATATTCCCTCTTGTTATTTCATTCTCAATGTGTAGTGTAACCTACTCTACCTGATCATGATTTGT TTGGTTGCACTTTACTATGTTAGAGTTGAAACCATTTTAGCTTTAGGCTGAGTATTTTGGAGTGTTTTAGGGTGTTACCC ATTCTTGAACTGAAGGAGCATGTGAAAAATTGCAAGCTGTTTTTCTTTTGTGAATAATATTCCTGAATTAGTTTTCAAGG CAAGCTTTTAGTATTGGTAGACACCTGTGCAACATCTATGAGACTGATCCACCCACCAATTATATGTGACAAGTTGGTTG CTGTGATGTGACCAATTTCTCATTCTCTATTTTTGCTTCTTGTGTTTGTTGCAACTTGCAAGTAATGGGGTTCCCACTAG GGTGGGCAATTTTGTTTTTGGTCCACCGGTGGACCACCCCTTAAACACCATTGGATTAAGGAATCTTAGAATATTCTTTA GATCAACGGTTAGGATTTATTGAAAACTAAAAGGGTAAAAATGTAAAATATCAAACCCTTCTCTCACTCCCTCTCCCTTC CCAGGCCCCAGCAAACCCATTCAACCCACCAACCTCCATAACCAGACCTCCTTCAATCCCCCACATCACCGATGCCTTTT CCTCCTTCGACTGCCGCACTCTCGCAAGAAGAAGGTGAACTAGATCGGCCCTGTGATGATGAAACGATGGCAGCAAGATC CGTGACTAAGGTAGACTAGTTGGACAAGAGGAAGAGCAGATCGCGACCTCCGCCGCATCACCGCGGTGGCCACCGTCGCT AACGTGCGCCAGTACCTGCTCCAAGTCGGAACGCAGGGAAATCGCGGTTCAGGAAACTATTTTCCTAACCCCCTTTTCTT TCTTTTTGATTTTTTTTTTCTCTTGGGTCACTTTTCTTGCTTCAGTTCTTGAAGTTTCTGTTGTGGGAAATTAACGTTGT GATTTTTATCAGTTTTGCTATGTTAATGGGTTTTGTGCAATGATTTTGATTCTAAATGGTTCAATTGCAGTTGGTGGATG GTTGGGAGGAAGAGGAAAGGGAAAAAGTAAAGGGAAGAAGGTAAAGTAAAGGGAAGAGGTCGTCGGAGGGTGCAAGGGTG CGGGTTGAGGATAAGAGACCACTGCCGTCGTTCGCGCCGCCATTGTGACCTCGCCACCACCACCTCCGACAAATGAAGTG ATGATGTGGGTCGAGAGAGAAGGAGTTCTTGCTGGATGTGGGTTATTTACATGATTTTGCTGGGGTTATGTATTAGATTT GTTGAATTGTTGGGGTGGTGGGGGTTGTTGTGGATGTGGGTTGTAGTTGCTCGGTGGTGGGGGACTGGGGGTTGTCTTTT TCTGGGTTTGGGAAGAATGTAGAAGATGGTTGTAGGAATGAGTGAGAGGGTAGGAGGGAGAAAATGATTTGGGGGAAAAG TAAAATAAAAAGAAAGAGAAAAACCAAATTTGCCCTTTGGTCCACCGGTGGACCAAAAAACAAAGTTACCCACCCTAGTG GGAACCAGTAATGGATCAAAGCAACCTTCATTTAATTTTCAAGGGTACATAAAGTGATCTAACGGGTACATGCTTTGATA ACCTTAAAATAATAAGGCACTTTAACATGAGCAAATATCTGATTAGGGAAATGTCATATAAAATGTAGCCGAATTTCTCT CAGGTTTTCACCTCTTATTTGTTACCTAGGGTAACCTTTTGCTTGTTACCCATCACATGTTGTGTGACCTTGTCGTTCTT TTCCTTATGTAAGGTTTCTCTCAAATCGCAGGAACATTGGATAAGTTGTCTGTTTGTCTCTTATATCTTGACATAATAAT AAGATAATCCTACATAAACAGACAATGATGTCATTCATTTTCTCATATTATAAAGAAGAAAAGGAAAGATTATAAGTTAT GGTACTTTCACAAATCTTCTGATTAGTAGATTAAAACTTTAATTGTGATTCATTGAATTGATCATAACCTCTTATTTTTA TTTACATAAGAAATATTAATTCTATTTTTCATAAAAAAATTAAGCACTAAATACAATATTATATGTTGATGTGGAATAAT ATGTAATAGAATTTTGGTTAGTCCTAACTCTATCTCAGCTAGCTTAGGAGTGAGTACCCTATATATTAACTTAATTAGTC ATATAATGTGAGACCTCTCAACACTCTCACTCACGCCCAGGACTGAACAATTGCATAGTTGGACATATGCGGCTGATCCA TTTATGGCATATGAGCGGCCCAATTAGAAGATATATGATAGACTTTAATACCATATTAGAATTTCGATTAACTCTACCTT AAAAGCCGGCTTAGGCGTGAGAATTGCTCATTTAGATTTATTTCTAATCAATGTACGTCAGTTAGACCTCTCAACAATAT GTGCATGTATACTCTAGGTGCATTAAGAAATAATGTACATCAATTTTCCCTGATAGGGACCCTTAGATCTTTATTTTGCA ATCTGACTTCTGAGTTCTGACCAAAGACAACCTCTTCATAGCTCATATGGTCATCTAACAAAATTGTCAGTGGTTTATCC AATGGTAAACTTGATTTGGTTCCCTTGAAGCCGTGCTATTTGAAGGATAATTATATCTTCACACCTCACTTTTGAGGTGT TGAGAGGTGGAAGAAGAGAGAGATATGAAGAAATGAAAGAGAAAGTAAAGATGTGATATGTGATTTGATTGATAAAAAAG AAAGAAATAAATAGAGTGGAGGTGGAAAAGAAGTGGAGATGTGTGTATATATCTTGAAGGGTCCTATAGGTACAGGATAA AGACAAACCCTTGGATACTGATCACCAACTTGCAACTTGTGATATTTTATTTGACCGGTAGTTTTCAATTTTATAAACTG TGTACCGGGCTAAGTGGAGCGATGAGAGCTGGATTTGCCACCCCAACCATTAGATTTCACACCCCTAATTTTCGGATTTT TAAGTTCCGAATTATTTCGGAATCTTAGATTCCGAAATTAATTCGTGATTTTTAGTTCAAAATACATCTAGCACCACACT TTTGAGTAAAAAACCACACTTTTGAGTAAAAAAGTGCTTCGGAAACCTTATTTCCGAAATATTTCGGAAACTGAGTTTCC GTAAGTGGGGTGACATTTCTAATGATTGGGGTGTCAAATCTAATGATCGGCTAAGTGGGTTGAAATGGAATCTTCACTAG ATCCAACCTTAAAAGTTATTCTAGTGCTTTGATAATTGATATGTACTTATGGGTTCATGTACCTTCTTCAAATGATCTAA GGTCAATTAACTATTTCTCTCACGTGATTCTGTTTTCTTTTTTCCTTTTTTCAGGTATCTATCTATGTTGATTTTGGGAA GAGAAAAACTCTTGTCAATGTACAATGCCAAAGTCGTGTTCATGTGTACAGAAAATGTGATCTCTTTCAATTGTAGAGTT TAGTTGTGATTTCTCTTATGTGAATCGAGTGGCTTAATATGGAAAAAGTCAAGGCTGGTCCCCGAAGGAGGCTTCAACTG TTGATTCCTAAGAATTGTACATTGAAAATCTCATGCAAAAATTGGGTTTATAAATTATCATTTGAATTAACTTGAGTGTG TTTGGTAAAACGTTTGAACTAACTTAAAATGTATTTAACTAGAGGTGTTTGGTAATTGAGTTTTTTTCTTTTTCTCATTA GATTGTACCCTTGTAGTGATTTTAAGATGCTACTTTATATAGTAGTTGAGTTTATATCTTGTTAATTATTTCCTTAAGTT AAACTTAAGTTTCAGTCCTGGAAACTTGCTTTTAATTTAATAGGTGAAGTATCTAAACAAGAGCTCAAGCCTGAATAAGT CTGGAAGCGGAAGTTTGAGTTTGCAAATGATAAACCAAATAGGTTCTAAGAAAGACTAATGTTTTGTTGGGAGTGAAAAT GAGAAGGAAGAATAATAGTCAAGAATATAAATGGAAAATGTAAGTTGTGGTGAGACATTGGCGCTACTGGCTTGGGAAAT CTTCAAGGGGTTTTGCTTGGAGTCAATATCAAGTAGTTCGGCCATGAAGTCGGATGAAGACATGTCAGTGTTTTCTGAAA ATGGACCAATATGAAAGAGAAAACAA
CDS sequence (LotjaGi6g1v0015600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCATTCAAAACCAAAAACATCATCAAAATCCAATGTTGTCATCACCTATTCTTGTCTCCTTCACTCTCATCCTCTC TCTCCCTATCCTTCTCTTCCTCTCCCCACAAACCCTCCCCTCACCCTTCACCTCCGACGCCGACGACCTCTACCTCTTCC ACCGCGCCTCCGCCGCACGCGCCACCACCACCAACCCCAAACCCAAAATCGCCTTCCTCTTCCTCACCAACTCCAACCTC ACCTTCGCCCCACTCTGGGAGAAATTCTTCACCGGCCACCACCACCTTTACAACATCTACATCCACGCCGACCCCTCCTC CGCCGTCGTCTCTCCCGGCGGCGTCTTCCACCGCCGCTTCATTACTTCCAAAAAAACCTACCGCTCCTCCCCAACACTCA TCTCCGCCACCCGCCGCCTCCTCGCCTCCGCCGTCCTCGACGACCCGCTTAACGAGTACTTCGCTCTTATCTCCCAGCAC TGCATTCCGCTCTTCTCGTTTCGATTCGTTTACAACTCTCTCTTCAAGAACCGGCTAGCCTCGCTCGCCGGTTCTAGTTT CCGGTACCGGAGCTACATCGAGATTATCTCCGATGAGTTGAACCTCTACGACCGTTACACAGCGCGCGGCGAGAACGTGA TGCTGCCGGAGGTGACGTTCGACGCTTTCCGGGTCGGGTCACAGTTCTTTGTTCTGACCCGGCGGCATGCGGTGGTTGTT CTCCGGGATCGGAGGCTCTGGAGGAAGTTCCGGCTTCCTTGCCTGACGGAGGAGCCGTGTTACCCGGAAGAGCACTATTT TCCGACGCTGCTTTCCATGGAGGACCCGAACGGCTGCACCGGGTTCACGCTCACGAGAGTGAACTGGACCGGTTGCTGGG ATGGCCACCCGCACCTTTATACCCCGCCGGAGGTCTCGCCGGAGCTCGTTCGCCGCCTTAGGGAGTCGAATTCCAGCTAT TCCTACCTCTTCGCGAGGAAATTCTCGCCGGAGTGTCTCACGCCGCTGATGGACATCGCCGATGACGTCATTTTCCGGGA CTGA
Protein sequence (LotjaGi6g1v0015600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIQNQKHHQNPMLSSPILVSFTLILSLPILLFLSPQTLPSPFTSDADDLYLFHRASAARATTTNPKPKIAFLFLTNSNL TFAPLWEKFFTGHHHLYNIYIHADPSSAVVSPGGVFHRRFITSKKTYRSSPTLISATRRLLASAVLDDPLNEYFALISQH CIPLFSFRFVYNSLFKNRLASLAGSSFRYRSYIEIISDELNLYDRYTARGENVMLPEVTFDAFRVGSQFFVLTRRHAVVV LRDRRLWRKFRLPCLTEEPCYPEEHYFPTLLSMEDPNGCTGFTLTRVNWTGCWDGHPHLYTPPEVSPELVRRLRESNSSY SYLFARKFSPECLTPLMDIADDVIFRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| PANTHER | 13 | 346 | 334 | 1.4E-169 | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PANTHER | 13 | 346 | 334 | 1.4E-169 | – | |
| Phobius | 35 | 347 | 313 | - | – | |
| Pfam | 70 | 313 | 244 | 2.2E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi6g1v0015600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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