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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0015600 |
| Transcript ID | LotjaGi6g1v0015600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1; TrEMBL-Plants: tr|I3SYZ7|I3SYZ7_MEDTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0015600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2758022..2765948) extracted from Lotus japonicus Gifu genome v1.2.
ATAAATTCAGCTTGTGGTTGAATCTTTGCAACTGCATTTGATTAATTAATTTGGAATCAATTGCCAATCCAAACGACAAA GCAGCCTTGATTGGTGACCCAATTGGAATTTGAAAGATCTAACAACATACATAATTCCTAGGAAGAAGGTGACAATGAAA CAAAATCAAAAATTAAAAATATCTGTCATATCTGTTCATTCCCATTTTCCTCAACCAAAACGCCTCTTCCTAGCTATCCA AATCCAAAACGCATACCCAAAAACCATGCCATCCCCATTATCTCTTTCTCATACATACAATACAAATGTCTTTATCATCA AGTTGCCTTCATGCAAAACCCCTTCACAGTCCTCTCATTTTATCTAACTCCACTAACAACAGAACCAACATCATGTAAAA CTCCTTTCAAAAAACATCATGTAAAACTAAAAGAAAAATGAAATGAGTAACTGAAAACCCAAAAAATAAACCCTCACATT TTCCATCTTCACTCACTCACTCTCTTTCATTCATTCATTCCCTTCCAAATTCCAATCTTCCATCATTGAATCATATCAAA ATTTTAGCATAAACTGTTGCATGCTCATTCAAAACCAAAAACATCATCAAAATCCAATGTTGTCATCACCTATTCTTGTC TCCTTCACTCTCATCCTCTCTCTCCCTATCCTTCTCTTCCTCTCCCCACAAACCCTCCCCTCACCCTTCACCTCCGACGC CGACGACCTCTACCTCTTCCACCGCGCCTCCGCCGCACGCGCCACCACCACCAACCCCAAACCCAAAATCGCCTTCCTCT TCCTCACCAACTCCAACCTCACCTTCGCCCCACTCTGGGAGAAATTCTTCACCGGCCACCACCACCTTTACAACATCTAC ATCCACGCCGACCCCTCCTCCGCCGTCGTCTCTCCCGGCGGCGTCTTCCACCGCCGCTTCATTACTTCCAAAAAAACCTA CCGCTCCTCCCCAACACTCATCTCCGCCACCCGCCGCCTCCTCGCCTCCGCCGTCCTCGACGACCCGCTTAACGAGTACT TCGCTCTTATCTCCCAGCACTGCATTCCGCTCTTCTCGTTTCGATTCGTTTACAACTCTCTCTTCAAGAACCGGCTAGCC TCGCTCGCCGGTTCTAGTTTCCGGTACCGGAGCTACATCGAGATTATCTCCGATGAGTTGAACCTCTACGACCGTTACAC AGCGCGCGGCGAGAACGTGATGCTGCCGGAGGTGACGTTCGACGCTTTCCGGGTCGGGTCACAGTTCTTTGTTCTGACCC GGCGGCATGCGGTGGTTGTTCTCCGGGATCGGAGGCTCTGGAGGAAGTTCCGGCTTCCTTGCCTGACGGAGGAGCCGTGT TACCCGGAAGAGCACTATTTTCCGACGCTGCTTTCCATGGAGGACCCGAACGGCTGCACCGGGTTCACGCTCACGAGAGT GAACTGGACCGGTTGCTGGGATGGCCACCCGCACCTTTATACCCCGCCGGAGGTCTCGCCGGAGCTCGTTCGCCGCCTTA GGGAGTCGAATTCCAGCTATTCCTACCTCTTCGCGAGGAAATTCTCGCCGGAGTGTCTCACGCCGCTGATGGACATCGCC GATGACGTCATTTTCCGGGACTGAGTTGAGCTAAGGTAAGTGAAGTGTAATTTACACACTCTAGTTTGTGGCAACTTTTC CTTTATCTTTTTTAAATCATATATTTTATTCTCTATTTTTTTAATTGTTAAGTTTTTTTTTCTTATTTTTAGTGTCACTG TCTAATTTTGGTGCTTTTGGTTATGGATATGCATAAATTAGCTTTGACATTTTGCATAAAGAAAAAAAAACATTCCACAA TTGGCTAATGGTTATGACCTAATTTGAGTAAACAGTCATTCTGGTCCTTGAATGTGTTCACTTATGACGGAGTGGTCCTC AGACTTTGGAAATGGGCTTTTTTCATCCCTGAATGTGTTGCCGTCGGTCAAGTTAGTCCTTGGTTCAGTTTTCCGTTAGT CCTTGAGACGGAAAAGGTCAAATGTCACGTTTTTGCCACATTAGCTTGACACATCATCAATGACTCACATCTTATTATGT CAATTTAGTCCCTCAGAAAATTAAAAAATAAAAACTCTGAATTTATTAATTCAAATGACAAAAAATCACTCAATCATCAT CTTCAACCTCATTTTCATCTTCATCATCAATCTCACATTCTTCTTTCTATCATTTCCAAAAAACAAAACACAAAATCCTC AAATCTTCATCCTCCATGGAAATAAACTACAAACGAGATCAGCAAAATTAAAAACAAAAAAAAAACAAAAAAAATTGTAT CCAAAAATTGTAACCAACATACCCTAATTCTCATTTACATTACAAAATTTCCCCCAATTTTCCCCAATCTCTGAATCAAT CTGTTACTTTCCCCAGCGAGGGTGTTTCTCAGCTTGCAATTGGTCAAGTTCCAAACCTTGACGGTTCGGTCCCAGGAAGC AGAAACTGGCCATCAGATGAGAGGACGACGTCCTGACCAAAGTGGGAATGTCCGGTGAGGCGGCGGCGGAGGACACCGTC GCGTTTGGGATGATGGATTTCGCCATTGGAGGAGAGAAAGGGAGAGGAATTAGGGTTTTGTTTAGGGAAGAAAAGGGGAA GTGGTGATAGAGAAGAAGAGGGAGAGAGTGAGGGTTTTGAACCTGTGGTGGCTCTGGCCTTGACACGATCGAGCATCCGC TTGCTGCTCTCTTTGGAGTACACCTAGAGGATCTCGATGCAGTCGGTATCAGCAGCGGTGGAGCCACCAGCGGCAGCAAA GGCCTCATCCTCGATCTGGCGAGCAGCAGCGGAGGCCTCGTCAGCAAAAAAATTGTTCGCTCGTTTCATCTCGTCTACAT CGATCCAAGCTCTCTCAATCTCGTTCTGGCTCTCTGGGGATTTGATTTGGAGATTTGATTAAGTTGGGTGACATGGAGAT GCAATTAATCTCTTGAGAGATTGAAGGTTGTGAGGGCGGTGGGATGGATTTGGAGAGATTTGTGGTAGTTGTGAGAGATG TTTGGAAGAAGAGAGCGTTTGGTGTGTGAGATTCTGCAACTTTCATCTATGCAGGAAGACAGAGGTTGATAGGATGAGAG GGGACGAAGATGAGCGATGAATAAGGGAGAGTTTTTGTTTTTCAGTTCAGAAATTAAGGATTAAAAATAATTAGAAATTA GATGTGATATTGAAATGTAACAGAATAAGGGGAAAAAAATTACAAATCAGCTTAAATTGGTTGATCTTGGATTCATTCAT TGGTTACTGGAATGAAACAAAGAACAAACTAGTGTCAAGATGAATTTTTTTAAGTGAAAATTTGAATTAATAAATTCAGA GTTTTTTTTTTTAATTTTTTGAGGGGACTAAATTGAAATAATAATAAGATGTGTGTAATTGATGACGTGTCAAGCCATGT GGCAAAAATGGTGACATTTGACATTTTCCGTCTCAGGGACTAACGGAAAACTGAACCAAGGACTAACTTGACCGACGGCA ACACATTCAGGGATGAAAAAAGCTCATTTCCAAAGTCTGAGGACCACTCCGTCATAAGTGAACACATTCAAGGACCAGAA TGGCTGTTTACTCGATTGAAAGTAGAAACCGCAGAATCCATTTGTCACAAGAGAAAAAAAGGCTTGATAGTTTAAGGGTT AGTTATTCTGATTTTTTACTAATAATATCAGCTTCTCAACCTCATAATCAATTCTCTAACCTAGAAGAAGTGCATGTTTG GATAGATGGTTAAAAATCATAATAAAGCCAAAATCACGGTATTATTCACAATTCACATCTGTAAATGCTAAGGAAAATTA CTTCTGTCCACCATTATTTTAGCTAGCTGACTGTAGTGTTACACATAGTATCCAAACATGCATGAAATTGTGAATGTGAG TACAATGAGATAGGGAGAGAGATACATGATCGGATATTTGATGGAAAGAATGAAAGTGATTAAAGAAAGTGTAAAGTGAG TGGGAGAGCAGTATGAAAAATTCTCATTCAATCCCGTTCCTTACATAATGACAAAAAAGGGTATGGTTTTTCTCTTATAA TTTATACACTTTGTGTGGTAGATATTACAAATACAGGCTGTCAGATATTCCCTCTTGTTATTTCATTCTCAATGTGTAGT GTAACCTACTCTACCTGATCATGATTTGTTTGGTTGCACTTTACTATGTTAGAGTTGAAACCATTTTAGCTTTAGGCTGA GTATTTTGGAGTGTTTTAGGGTGTTACCCATTCTTGAACTGAAGGAGCATGTGAAAAATTGCAAGCTGTTTTTCTTTTGT GAATAATATTCCTGAATTAGTTTTCAAGGCAAGCTTTTAGTATTGGTAGACACCTGTGCAACATCTATGAGACTGATCCA CCCACCAATTATATGTGACAAGTTGGTTGCTGTGATGTGACCAATTTCTCATTCTCTATTTTTGCTTCTTGTGTTTGTTG CAACTTGCAAGTAATGGGGTTCCCACTAGGGTGGGCAATTTTGTTTTTGGTCCACCGGTGGACCACCCCTTAAACACCAT TGGATTAAGGAATCTTAGAATATTCTTTAGATCAACGGTTAGGATTTATTGAAAACTAAAAGGGTAAAAATGTAAAATAT CAAACCCTTCTCTCACTCCCTCTCCCTTCCCAGGCCCCAGCAAACCCATTCAACCCACCAACCTCCATAACCAGACCTCC TTCAATCCCCCACATCACCGATGCCTTTTCCTCCTTCGACTGCCGCACTCTCGCAAGAAGAAGGTGAACTAGATCGGCCC TGTGATGATGAAACGATGGCAGCAAGATCCGTGACTAAGGTAGACTAGTTGGACAAGAGGAAGAGCAGATCGCGACCTCC GCCGCATCACCGCGGTGGCCACCGTCGCTAACGTGCGCCAGTACCTGCTCCAAGTCGGAACGCAGGGAAATCGCGGTTCA GGAAACTATTTTCCTAACCCCCTTTTCTTTCTTTTTGATTTTTTTTTTCTCTTGGGTCACTTTTCTTGCTTCAGTTCTTG AAGTTTCTGTTGTGGGAAATTAACGTTGTGATTTTTATCAGTTTTGCTATGTTAATGGGTTTTGTGCAATGATTTTGATT CTAAATGGTTCAATTGCAGTTGGTGGATGGTTGGGAGGAAGAGGAAAGGGAAAAAGTAAAGGGAAGAAGGTAAAGTAAAG GGAAGAGGTCGTCGGAGGGTGCAAGGGTGCGGGTTGAGGATAAGAGACCACTGCCGTCGTTCGCGCCGCCATTGTGACCT CGCCACCACCACCTCCGACAAATGAAGTGATGATGTGGGTCGAGAGAGAAGGAGTTCTTGCTGGATGTGGGTTATTTACA TGATTTTGCTGGGGTTATGTATTAGATTTGTTGAATTGTTGGGGTGGTGGGGGTTGTTGTGGATGTGGGTTGTAGTTGCT CGGTGGTGGGGGACTGGGGGTTGTCTTTTTCTGGGTTTGGGAAGAATGTAGAAGATGGTTGTAGGAATGAGTGAGAGGGT AGGAGGGAGAAAATGATTTGGGGGAAAAGTAAAATAAAAAGAAAGAGAAAAACCAAATTTGCCCTTTGGTCCACCGGTGG ACCAAAAAACAAAGTTACCCACCCTAGTGGGAACCAGTAATGGATCAAAGCAACCTTCATTTAATTTTCAAGGGTACATA AAGTGATCTAACGGGTACATGCTTTGATAACCTTAAAATAATAAGGCACTTTAACATGAGCAAATATCTGATTAGGGAAA TGTCATATAAAATGTAGCCGAATTTCTCTCAGGTTTTCACCTCTTATTTGTTACCTAGGGTAACCTTTTGCTTGTTACCC ATCACATGTTGTGTGACCTTGTCGTTCTTTTCCTTATGTAAGGTTTCTCTCAAATCGCAGGAACATTGGATAAGTTGTCT GTTTGTCTCTTATATCTTGACATAATAATAAGATAATCCTACATAAACAGACAATGATGTCATTCATTTTCTCATATTAT AAAGAAGAAAAGGAAAGATTATAAGTTATGGTACTTTCACAAATCTTCTGATTAGTAGATTAAAACTTTAATTGTGATTC ATTGAATTGATCATAACCTCTTATTTTTATTTACATAAGAAATATTAATTCTATTTTTCATAAAAAAATTAAGCACTAAA TACAATATTATATGTTGATGTGGAATAATATGTAATAGAATTTTGGTTAGTCCTAACTCTATCTCAGCTAGCTTAGGAGT GAGTACCCTATATATTAACTTAATTAGTCATATAATGTGAGACCTCTCAACACTCTCACTCACGCCCAGGACTGAACAAT TGCATAGTTGGACATATGCGGCTGATCCATTTATGGCATATGAGCGGCCCAATTAGAAGATATATGATAGACTTTAATAC CATATTAGAATTTCGATTAACTCTACCTTAAAAGCCGGCTTAGGCGTGAGAATTGCTCATTTAGATTTATTTCTAATCAA TGTACGTCAGTTAGACCTCTCAACAATATGTGCATGTATACTCTAGGTGCATTAAGAAATAATGTACATCAATTTTCCCT GATAGGGACCCTTAGATCTTTATTTTGCAATCTGACTTCTGAGTTCTGACCAAAGACAACCTCTTCATAGCTCATATGGT CATCTAACAAAATTGTCAGTGGTTTATCCAATGGTAAACTTGATTTGGTTCCCTTGAAGCCGTGCTATTTGAAGGATAAT TATATCTTCACACCTCACTTTTGAGGTGTTGAGAGGTGGAAGAAGAGAGAGATATGAAGAAATGAAAGAGAAAGTAAAGA TGTGATATGTGATTTGATTGATAAAAAAGAAAGAAATAAATAGAGTGGAGGTGGAAAAGAAGTGGAGATGTGTGTATATA TCTTGAAGGGTCCTATAGGTACAGGATAAAGACAAACCCTTGGATACTGATCACCAACTTGCAACTTGTGATATTTTATT TGACCGGTAGTTTTCAATTTTATAAACTGTGTACCGGGCTAAGTGGAGCGATGAGAGCTGGATTTGCCACCCCAACCATT AGATTTCACACCCCTAATTTTCGGATTTTTAAGTTCCGAATTATTTCGGAATCTTAGATTCCGAAATTAATTCGTGATTT TTAGTTCAAAATACATCTAGCACCACACTTTTGAGTAAAAAACCACACTTTTGAGTAAAAAAGTGCTTCGGAAACCTTAT TTCCGAAATATTTCGGAAACTGAGTTTCCGTAAGTGGGGTGACATTTCTAATGATTGGGGTGTCAAATCTAATGATCGGC TAAGTGGGTTGAAATGGAATCTTCACTAGATCCAACCTTAAAAGTTATTCTAGTGCTTTGATAATTGATATGTACTTATG GGTTCATGTACCTTCTTCAAATGATCTAAGGTCAATTAACTATTTCTCTCACGTGATTCTGTTTTCTTTTTTCCTTTTTT CAGGTATCTATCTATGTTGATTTTGGGAAGAGAAAAACTCTTGTCAATGTACAATGCCAAAGTCGTGTTCATGTGTACAG AAAATGTGATCTCTTTCAATTGTAGAGTTTAGTTGTGATTTCTCTTATGTGAATCGAGTGGCTTAATATGGAAAAAGTCA AGGCTGGTCCCCGAAGGAGGCTTCAACTGTTGATTCCTAAGAATTGTACATTGAAAATCTCATGCAAAAATTGGGTTTAT AAATTATCATTTGAATTAACTTGAGTGTGTTTGGTAAAACGTTTGAACTAACTTAAAATGTATTTAACTAGAGGTGTTTG GTAATTGAGTTTTTTTCTTTTTCTCATTAGATTGTACCCTTGTAGTGATTTTAAGATGCTACTTTATATAGTAGTTGAGT TTATATCTTGTTAATTATTTCCTTAAGTTAAACTTAAGTTTCAGTCCTGGAAACTTGCTTTTAATTTAATAGGTGAAGTA TCTAAAC
CDS sequence (LotjaGi6g1v0015600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCATTCAAAACCAAAAACATCATCAAAATCCAATGTTGTCATCACCTATTCTTGTCTCCTTCACTCTCATCCTCTC TCTCCCTATCCTTCTCTTCCTCTCCCCACAAACCCTCCCCTCACCCTTCACCTCCGACGCCGACGACCTCTACCTCTTCC ACCGCGCCTCCGCCGCACGCGCCACCACCACCAACCCCAAACCCAAAATCGCCTTCCTCTTCCTCACCAACTCCAACCTC ACCTTCGCCCCACTCTGGGAGAAATTCTTCACCGGCCACCACCACCTTTACAACATCTACATCCACGCCGACCCCTCCTC CGCCGTCGTCTCTCCCGGCGGCGTCTTCCACCGCCGCTTCATTACTTCCAAAAAAACCTACCGCTCCTCCCCAACACTCA TCTCCGCCACCCGCCGCCTCCTCGCCTCCGCCGTCCTCGACGACCCGCTTAACGAGTACTTCGCTCTTATCTCCCAGCAC TGCATTCCGCTCTTCTCGTTTCGATTCGTTTACAACTCTCTCTTCAAGAACCGGCTAGCCTCGCTCGCCGGTTCTAGTTT CCGGTACCGGAGCTACATCGAGATTATCTCCGATGAGTTGAACCTCTACGACCGTTACACAGCGCGCGGCGAGAACGTGA TGCTGCCGGAGGTGACGTTCGACGCTTTCCGGGTCGGGTCACAGTTCTTTGTTCTGACCCGGCGGCATGCGGTGGTTGTT CTCCGGGATCGGAGGCTCTGGAGGAAGTTCCGGCTTCCTTGCCTGACGGAGGAGCCGTGTTACCCGGAAGAGCACTATTT TCCGACGCTGCTTTCCATGGAGGACCCGAACGGCTGCACCGGGTTCACGCTCACGAGAGTGAACTGGACCGGTTGCTGGG ATGGCCACCCGCACCTTTATACCCCGCCGGAGGTCTCGCCGGAGCTCGTTCGCCGCCTTAGGGAGTCGAATTCCAGCTAT TCCTACCTCTTCGCGAGGAAATTCTCGCCGGAGTGTCTCACGCCGCTGATGGACATCGCCGATGACGTCATTTTCCGGGA CTGA
Protein sequence (LotjaGi6g1v0015600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIQNQKHHQNPMLSSPILVSFTLILSLPILLFLSPQTLPSPFTSDADDLYLFHRASAARATTTNPKPKIAFLFLTNSNL TFAPLWEKFFTGHHHLYNIYIHADPSSAVVSPGGVFHRRFITSKKTYRSSPTLISATRRLLASAVLDDPLNEYFALISQH CIPLFSFRFVYNSLFKNRLASLAGSSFRYRSYIEIISDELNLYDRYTARGENVMLPEVTFDAFRVGSQFFVLTRRHAVVV LRDRRLWRKFRLPCLTEEPCYPEEHYFPTLLSMEDPNGCTGFTLTRVNWTGCWDGHPHLYTPPEVSPELVRRLRESNSSY SYLFARKFSPECLTPLMDIADDVIFRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| PANTHER | 13 | 346 | 334 | 1.4E-169 | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PANTHER | 13 | 346 | 334 | 1.4E-169 | – | |
| Phobius | 35 | 347 | 313 | - | – | |
| Pfam | 70 | 313 | 244 | 2.2E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi6g1v0015600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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