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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0019300 |
| Transcript ID | LotjaGi6g1v0019300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose transporter protein; TAIR: AT1G71890.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9C8X2|SUC5_ARATH Sucrose transport protein SUC5; TrEMBL-Plants: tr|I1MNY8|I1MNY8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0019300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:3436428..3442490) extracted from Lotus japonicus Gifu genome v1.2.
TCACTAGCTATCACCACAGCACACATATATAGGAAACCATTCTCTGTCTGTAATTAATTAACAGCTGGCTTGCTGTTAGT ATAGATCCATCAATTGCGCCCTATAAATTATGCAGTCTCTTGTATCTCTCAATCATCAATTGAATCACATTCACTAACTA ATTGAGTTTACTCTCAACTTCTTCTAACATAATCCGTTTGGCTACTTAATTGCTATTGGATAATAGCGTTCATTCTAGGT AATTTTCTCATCTTATCTTTTCTTTATTATATTGCTAACTTCTTCATTTTATATATATATAGATATGCTTTTCTCACTAA CTTGTTTTCTCTGTGCTCATCCTTTGCTAGCTTCTTTGGTTGGATCCTTAATTTTTCACTTTATGGGAGCAAGCCATGCA TTGAGAAGAAGAACAAAGACATCGACCTAGCAGCTCCTTCAACAAATCAAACTCCAACCTTTTCTTCATCTTCAGTTCTG CCGCACGCACACTTTTCCACCATCGACTTTTCCTCCGCATCACCTTCAACATAGAACTTATATACTATACGTAATAGTCT CTCACTCTCTTATTTGTGATCAAAAATATATTTTCTTCACTGATTTCTAATTAACCAATTGCTCCCCTTGCCATATTTTC CAGGGTACGGTGGTGTTGTTGCATAATTATATTTGAACTCAATTTTCCATAGGTAGCCAAGATGATTCTCATTCATGAAC TAACGAGTTTTATTTTGCTTTCAAAATATAAAAGAAATTATATTCCCCAAACCTTGTTTTTTAATTTGAACCAAACCATG AAATAAAATTTCACGGTGGTTTTATACTATAAAGTGTTCTATATACTTCTACCCCACTCATGCACTCGATCTGATTCTTA TTTTGCTATAGAATGTCTGCAATAAATTGGTTTTTTAATGGCCTTTTCATGTTTTTTTTTTTATTTTGTGCCCTCGGCCG TGTGAAGAATTCATGATGATATGATTGTTATGGAAAAAGAAACATGATAACAAATGGAAAACATGATATATACAAGAGTG TTTCTTTTAAGACATTAATTCCTTAGAAACTGTAATATAATTCTGAGGCTGGTGTTGACTCTAATTGTGATTGCTTTTTG TCTATTTGCATACTTTAATTTGAGGTTACGTGACCTTTTCTTTAATCTTCTATTCATAAATTTACTTTGATTATTGGTTC TCAGATATAATATGATCTATTTCTATTGTGACTATGGCCAATTTTCAGATAAAAAAATTGCACACTAAATGTATGTTCTA TAACTTATCCTGTGAGTTCTATATCTCAAAGTCAATTTTCTTGCCTGTAGGTTTTAGGTATTATTTTCCCTTTTATTTTG TAAACCAAATAGAATTGATGGAGAGCACAAGGAGTGCCCAGCTCAAAAATAAGTAAATAGCAAAAGACAACATGCTGTGT CTCTTAATTTTTCTAATATTACATAAATATCACAATTCCACTTCCTCAAGGGATCCCGACACACTTGGTGCCACAGCACA GAGTTAACACTCCCCAAACCACCACTCTCTTCCCCAACAGATAGCCTTGTTTGCGAGTGGTACGTGGTGGCTGTGTGGTA ATTGCAACAGCTTTTTTTTTTATAAGCAAACTATGTATATAATAGGGAAGTACTAGGTGTACTTCAAACTAAATTACAAG AGAAGAGAAAGAAAGAAAGAAAGAAAAATAAGGAACTAGCTAACCCATCTCTGGAAAGACTATCTAACAATATGGCCAAC ACTCAACTACCAATCTTTACAATAATCTTAGTCTACCAGAAACATACAACGAACTCCACTAGAAATCACAAGAAGGCAGC AGCCCAAAAGGACCAGGATCTCAACGTGGAGTGGAGGCAGCCAGCAGAAATTAGAGCAGCATCAATTAAGAGAAGATTTA TAGGCTACTCAAACAAATGAGAGGGTTTGACAGCCATTCATACATAGAGAAACAAAACCCTTTCAATTTACCTCTTAACC ATAGCCATGCCTTGTATTGGATCATATCCAAAGCTGTTGTGAGGTCCACTACTACTCCATTAAAAATCACATTATTTCTC ATGTTCCAGATGAACCAGATTGTAGAGAGCCAAATGAAACCCAATCCTAATTTTTGTCCCTCTCACAGTGGCTTCCTAGG AACATTAAGAGGTGAATATTACCTTCACTTGGCGAAGCCGTTGTAATACCAATCCAACTGTAGACAAGGTTCCAGATTTG CCAAGATTTTGGGCAGGTGAAAAACAAATGTGTTGTTGTTTCCTCATGAGCAGAACATAGAGAGCACAAGGCTTGAGCTG TACCTTGAATTATCCCCCTCCTTTTCAGATTCTCCTTCGATTGCACCCTATTTAGAAGAACCTTCCAAGCCAAGGATACC GCATTCGAAGGAGCTTTGATGGACCAGAGTTTGCGAAAGACCTTGTCTTGAGGTTCAATCACAGCAACTTGTAGAAGTGC ATTAGCAGATTTTACAGAATAGTTACGAAAGACCTTGCAACAGCTACTATTCCTCCCTACTACATGAATAAAGAAAATAT TCTTCCCTGCTACTTTTAAAATGAGAATGCCACTCTTAATATTAGATAGAAGCTTCTTCATATATATAGTTGCAAGATAA ACTAATCGTTTTTCTTTCTTTCTCAAGTACTTTCACCATGGAACCTCCTACACAGAATACACAGCCCACCCCTCTAAGGA AGGTGATTGTTGTGGCATCCATCGCGGCTGGGATACAATTCGGTTGGGCGCTCCAGCTTTCCCTCCTCATGCCTTACATC AAGCTTCTAGGCGTTACACACAAGTCTGCCCCTCTTGTCTGGCTCGGTGGACCCATATCTGGGGTGTTCGTCCAGCCCAT TGTGGGCTACTACAGCGACCGTTGCACCTCCCGCTTTGGCCGTCGCCGCCCATTTATCTTCGCTGGCACAATTGCGGTCG TTGTCGCGGTCTTACTCATCGGCTATGCCGTGGACCTTGGGCATGCATTTGGGGACGACCTCTCAAAGAAAACTCGCCCC GGCGCCATCACCATCTTTGTAGTCGGATTTTGGGTACTCGATGTCGGCAACAACATGCTTCAAGGCCCCTGTCGTGCCTT CCTCGGCGATCTTTCCACTGGTCAGACGAGCAGTTTTCGTACCGGCTACACCCTCTATTCATTTTTCATGGGCCTTGGTA ATAAGAAAAGAACAATCCTATATCATTTTGCATTAAATTCAAATGACATTGCTATCTTGTAATACAATTGGCATTTGATA CTTCAATAGGTAATCTGCTGGGATTTGCGGCAGGTGCATACGGCAGGCTCCACAATATCGTTCCCTTCACAAAGACGAAG GCATGTGACGCGTTATGTGCTAACCTGAAAACATCCTTCTTCATAACGATCATCCTTCTGCTCCTTGTTGTCATCTTCGC ACTCGTTTATGTGCGCGACCCTCCAATCGGGCCTGTTCAAGAGACCGGCCACAATGTGAGTAATCAGTGGTTCGTAGGGC TCATCGGCGCCATTAAAGAGTTGAAGAAGCCAATATGGATGTTGATGCTGGTGACCGCCATCAACTGGATTGCTTGGTTC CCTTTCGTCATCTACGACACTGATTGGATGGTGCGGGAGGTGTATGGTGGGGATGCAGGGACGGTAGCGTACGATGCTGG GGTTCATGCTGCCACATTAGGGCTGATGCTGAATTCGATGGTGGTGGCTTTGACTTCACTAGTTGTGGAGCGGGTGAGCC ACGGTGTTGGGGGGACCTAACAAACTATGGGGGATGGTTAATTGCATTCTTGCAGTTTGCCTCACCATGACAGTGCTCAT TGCCAAGGTGGCAGAGCATGAACGCCAGGTGAGCAGCGGCGCCACCGTCGGGAATCCATCCACTGGAGTGAAGGCCAGTG CCATGATCCTCTTCTCCGTCCTCGGAATCCCTCTTGCGGTAATTTTCATTTCTTTTTCAATCTTTATTGCCTATCGTCAA AAAAATAAACTAATACACTCCTTTTCTTAACATGTGTGCAGATTACTTATAGCATCCCATTTGCGCTTGGATCGATATAC TCAACCAGTACAGGGGGAGGACAAGGTAAATCAAGTCACATGCCACTCGCTGTATTTTTTCACGATCTGAAATAATTCAT GGATGCATTAAGCTATATTTGAATAAATTATTGAATTTGGTCCCTATTTAGTTTTTTTATTTTGGTTCCTCTAAAATAGC AAATAATTGATTTTTGTCCTTCTGTTCTTTTTATGGCATTGTGTGGCGGTTAGAAAAGCCACTAAAACATGCTGTAATAG TTTTTGTGCATTTGTGACATTTTTTTAAACCACCACAATTTTTTTATGAAATGTTTATTTAAAAATTTAGGCCAACTAAT ATAATTAATCGTTGTTAACTAAATATAATCAGTTTTTTTCTTTCCATTTTCAGGTTTATATTTTGGAGTTCACAATATTG CAATGGTCATTCCACAGGTTAGAAATCTATTTACTTTAACATATTTGCCTCTTTCTATTCTTAAATACCTTAATAATTGT AACCAAAAATGTTTGAAAGTAAACCAAAAATTACTTAATAATTAGATATATAGGCGCTGAGGAATAGATGGAGGGTGGTT ATTTAATTGAAGTGTTGCAACTGATGCCTTTTTCTGTAAGTCTGGTTTGGATGTAAGATGGTTGTTTGTCTGGTATATGA GTCTGCAAAAATGATTGTCAACCTGATATACGCCGGCCTTAAAATTTAGTTATAATGGCAGCGTCCACGTGTGTTGTGCG TTTGATGCTAACCATGCACCTTATTGAGGTAACTTAAGTTTAAATCTACACTCTCTTATAAATTATATATAAGTGTAAAT GAGGTGGTAATATATAATAGAAATATTTAAAAAATAAAGATAAATAGGACATGTCATAACTGACATAACTAAAACATAAG AGAGATAGATAGAGACGAAAGTGGAAATGAAATGAAAGGGATGACAATTTTTACCTGCATATGGGGATCCCTGCGGGGAT TGCTCCATTTGGGGACCTGATCTAGGGAAATTTTTCTCTGTGGGGATGGGGTGGACGGAATTTCCCTGAGGCAAATTTTG GGATGGGGTGGGGGATCACCCTTCCACCCCATATACATAGGTAAAACTTTAATAATACCCTTAATAATAAAGTCAAGTAG CTAATAAAAAAATATAAAAGATCACAAGCGTAGCTAATCAGGTACTTCAAAATTTCAATTTGAACAACATATATTTAATG AAAATAAAGATGTTGACTGAGGTAAAGAAATAGCTGGTTTTTACATATATATAAACATTTGTGGTCCAAGTATAAATTTA TGTATTTTTTATTTTATTTGTAATGATGTATTAGTGATTCTCATGGAGACTCATGGGGACCTGTGGGGAAGTGGAGATTG GGGATATGGTGAAAATTGACCCCACCACGAGATTAGGGAGTATGAATGGGGACAGGGAAGAGGTGCGAAGATGGGAAGTG GAGAAGCACTCCCCGCCCCCTATGGAAGTGTGAATGTGTGATGACCCAATAGTAGTTATTGTCAAATGCTTTAAGTAGTT TTAGACTATTAGGTGTACTAGCTCTTTAGATAGTTGATGAAATTTATCGATAATCTTATTTATATGCCTAATAAAACCAT TTTATGTTACAGATAATTTAACTACTTATTGTGCATACATGCAGATAATTATATGGGGATTAAGTGGACCATGTGATGCT TTATTTGGTGGTGGTAACTTGCCGGCGTTTTTGGTGGGTGCCATAATGGCCGTTGTTAGTGCCATATTGGCAATAGTTTT GCTGCCTTCTCCAGCGCCAGCTGATCATACGGCAAATGCTTGATTTATTATGCAACATTGATATTCTTATTGTTAACTTT TGTTTTGCCGTTTCTTTGGCATTGGTTTTTTTTTTTTTGAAATTGCATTGGTTGTTAACCATATTGATGTTTTCTTTTGA ACGTAACCATATTGATGTTTGTAACACTTGTATTATACCTTAAAAGTAATAATTGTATTATTA
CDS sequence (LotjaGi6g1v0019300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAATTGCATTCTTGCAGTTTGCCTCACCATGACAGTGCTCATTGCCAAGGTGGCAGAGCATGAACGCCAGGTGAG CAGCGGCGCCACCGTCGGGAATCCATCCACTGGAGTGAAGGCCAGTGCCATGATCCTCTTCTCCGTCCTCGGAATCCCTC TTGCGATTACTTATAGCATCCCATTTGCGCTTGGATCGATATACTCAACCAGTACAGGGGGAGGACAAGGTTTATATTTT GGAGTTCACAATATTGCAATGGTCATTCCACAGATAATTATATGGGGATTAAGTGGACCATGTGATGCTTTATTTGGTGG TGGTAACTTGCCGGCGTTTTTGGTGGGTGCCATAATGGCCGTTGTTAGTGCCATATTGGCAATAGTTTTGCTGCCTTCTC CAGCGCCAGCTGATCATACGGCAAATGCTTGA
Protein sequence (LotjaGi6g1v0019300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNCILAVCLTMTVLIAKVAEHERQVSSGATVGNPSTGVKASAMILFSVLGIPLAITYSIPFALGSIYSTSTGGGQGLYF GVHNIAMVIPQIIIWGLSGPCDALFGGGNLPAFLVGAIMAVVSAILAIVLLPSPAPADHTANA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 140 | 140 | 1.3E-54 | – | |
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 140 | 140 | 1.3E-54 | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| CDD | 37 | 128 | 92 | 9.39812E-16 | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 43 | 65 | 23 | - | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| Phobius | 77 | 98 | 22 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 99 | 109 | 11 | - | – | |
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 110 | 131 | 22 | - | – | |
| Phobius | 132 | 143 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0019300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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