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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0022400 |
| Transcript ID | LotjaGi6g1v0022400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G05030.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q0WVE9|PLST1_ARATH Probable plastidic glucose transporter 1; TrEMBL-Plants: tr|A0A0B2QEL5|A0A0B2QEL5_GLYSO Putative plastidic glucose transporter 1; Found in the gene: LotjaGi6g1v0022400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4222135..4227192) extracted from Lotus japonicus Gifu genome v1.2.
CTGATGTTCCAGGTCATGAACAAGTAGCAGATATTTTCACAAAAGCTATTTCCAAGCTAAATATACTACTACATTGAGGG TTGGGTCATTTACTTCACCACCCTAAGTTTAAGGGGAGAATTTTAGATATGGCATACTTGCTACTTTTTTTTTTATATGT GGAGTAAAGAAATTTTAAAACATCAATAGCGAGTCCTTCTTTCTCATGTCTCTTCATTGTCAAATTTGGTGTAGGTTGCT CCAACAAAATATCGGGGTGCCCTAGGGTCCTTTAGTCAAATTGGCACTTGCCTTGGCATTATTGCTTCACTATTTCTTGG AATTTCTTCTGAGAACGATCCACATTGGTGAGTTTATTCGTTTCTTTCTTCTAGGTTTGTGGAATTGGTATTTATCTCTC TAATTTTGACTTGTGTTTGTTTGTATATTGGTATGATATTGATGTTGATAAACTTTTTTACTTATTAAACATACGTTGAG GGGTTAAACAAGGAAAAAAGTTTATTTGGTGAATGATGTTTAGGTTTCTCGAGCTTTTCATTAGAAATTTTCTATTGATG TGCTGCAATAAAATTCATAGGATAAGTAACTATTATAGTAGTTTACTGAGTTAGTTTAATAAGAAAGGAAGTTTGAAGAG GCTCATCTTTTGTTTTGGAAAAGAATTTAGAGTGGGAGAGAGCTGTGCCTGGAATACCTTCTGTATTATCAGATTTCTCG TGATTTGTGAATAAACACATTTTTTCTGGTATATTCTAATCCAATTTCTATCTGTTGAGAAGTCTCACGTTGACTCGAGA TATGGCCGAGATAACCCTTATATATGGGAAGGTAATCCTCACTTCTTACTCTAAGCTAGCTTTAGGGGGTAGAGTTAGGC CTAACCCAAATTCTAAGATGGTCTCAGAGCTTATCCTAGATCGTTTATTGGAGATCACCCATATATGGGTCACGTGCAGA TGTTCATTCCTGCAAATCCCACTCTCCAAATGTCCAACATTGACTAGAGATATGGTTAAGACAACCCTTATATATGGGAA GGCGATACTTATCTCTAATCTAGCTTTTGGGGTAGAGTTAGGCCTAACCCCAATTCTAAGACTATTAAATGGTATTAGAG CTCCAATCTTAGGGAACTAATAATTTTATGAAGATGATTCCAATATTTGATGGGAAAGGCTGGTGGTTGATCAAGCTAGA GTAGTATTTTGAAGCCATTCAAGTACTTGAGTAGGAGATGCTATCGGTTGTGACAACAGGTGAAGAACTCACCATAAAAG GATGACAACATTATAATACCATTACTGTAGCACTGAATAAGTTTTCGGAAATGAGGGGGAAGAGGCATGTGATAGCCATG GGACATCAATTCTTGGATATTTTCCGATTAATTCGCCACCATCACAAGATTCCCTCGACTGAAATTAGACATAGGACATT GATAGATTAACAATTTTGAGGCAACACTCAACCTTAATTATATTCATTTATGCTAATATTAGACTGTAAAGTCTAAACCC TGATTAAATAAGGAAACAAATCATGATATAAAAGGAAGTATGGAACTGTTCAGATTGTGTCCAGATTTGTTTTGATTAAA TGTATAGTTTTCTTCCTTGTATATCATAATACCTAAATTTAGGGATTGGGGGAGCTGTCGCAGAAGCTTTGCCCTTTGTA CAGAGATTGTTATGAACTGACTAAATGACTAGCGGAACGCTAGCTAAGCTAAAAAAGAGTATTAGTTCCCCAAATCAATA AGCTTTTTTTGTGTATAAATATTGTACAAGTCCTGCATGAAATACACAGAACATTTTCACTGTTTAGATTTTAGGGAAAC CAGTCATTAAGGATAATCTAAGTGACTCTAAATTACTGTAAGATACAATTTAAATATTATAAGACATTTTTCATACAGTA TAACACTCTTTCTATTATTTCAAATTGGACTTCATGAATATAGAGCCACAACCACAGGCTTGCCACCTTATTTCAATCAA GTTAGGGTGAAAGTAATGTTTTCTAACAATGGCTGTTAGACACGTCTGGGTCTGGAATTCTATAATATGTTCACTTTGCA CTTGGTGGAACTGTGAAATACTTATGTGATGTTTATGGTAACAAAACCTACGGTCATAATAAATTCACATGGTAGTGGTT TTTGGGTCTTATTTGATTATGATTCTTCCGTCATTTGTAAGTTATACCTTAGGAACTATAGATTATTTTCCTAATAAAGC TTACATGCCACCCACAAATTCATATTCAGGTGGAGGACAATGCTGTATATTGCAAGTATCCCTGGTTTTATTGTTGCACT TGGTATGCAATTTTCTGTTGATAGTCCACGCTGGCTTTGCAAGGTAGGACTTCATTATTTCCTTTTCTGACAATTTATAT ACTTTTCCACTGTTTGTAAAGCATTACCTTTTTTTGCTCAGACTGGGAGAATAAATGATGCTAAAACAGTAGTACGTGAG CTTTGGGGAGCATCTGAAGTTGAGAGTGCAATTAAAGAATTCCAGTCTGTTAGCAAGAATGATGGTAGGGATTTGGACAG CAGATGGTCAGAGATTTTGGAGGAGCCACATTCTAGAGGTTGTATCAAGGTGGTTTTGACTGTTACTTTTGAACTGCATT ATATGCATGGAAAGTTATTCTTTGACCTATCCCAATAGATTGAATATCATGTCAGGGGAGATGTAAGCACATCAAAGTTA TAGTTTCTACTGGAGATGGCAATAAAACAGATCTCTCTTCTTTCATAAACCAGCATATATCTATAATTATGACAAGCACA TGTCACTTGAAGCATAAATTTCATGATGGACTTTCATGTATGATTGCAGTTGCCTTCATTGGAGGTACTCTTTTCGTACT TCAGCAGTTTTCAGGCATAAACGGAGTTCTTTATTTTTCATCACTGACATTTCGAGATGTTGGAGTTCAAAGCAGTGCAT TAGCAAGCTTGTTTGTTGGGCTAACTAACTTTGCAGGTTTGCAACATGCAATGCATTTTTTTCTCAATATAAATTTCTTC TATTATTCAGATTGTGATTGTTGTGTACTGATGTTTTTCTTCAGGTGCACTTTCTGCTTTATACTTGATCGATAGAGAAG GGAGACAAAAACTTTTGATTGGAAGCTACTTAGGAATGGTGAGTGTGTATAAGATGTCCATAACTTCTTTCACGGTTAAC AACAACAGCAATAACAAAATCCTTATCCCACTAAGTGAGGTTGGCTATGGATCACACTACACCATTGAGCTCGATCAAAA CTAAAATTTGTGGGATATTATTGACAGTGAGGTCATTTTTAATAATACCTTCCAATGTCATTTTTGGTCTACCTCTACCC CTCTTCACATGAATAAAGATCATACCCTTCTCACCGGTGTCTCCGAAAATCTTCGTGTACATGTCCGTACCACCTTAACT GGTTTTTTGCCAGCTTCTCCTCGATAGGCGTATTAGAATTTGGATTAAGGCTCTACCCCAAAAGGTAGCTTAGGAGTGAG GGTTGCTTTACCCTTTATAAGGACTATTTTGGCCATATCCTTACGTCAATGTGGGACTTCTCAACACACCCCCTCAAGCC CAAGGCTGAACAGCTGGAGCATGGAATTTGCAGCAATGAACATCTGTGGGTGGGCCATATACGGGTGTTCTCCTCTAAAC GAATCTAGGATAGGCTTTGATACCAAATTATAATTTGGAAGCCCTAACTCAACCCATAAACTAGCTCAAGAGGTTAGGAT TGTCTTCCCATATATAAGTGCTATCTTGGCCACATCTGTAGTCAATGTGGGACTTCTCAACAGAGTCTACCCTTCGTATT TTTTTCTTTTTTCTGTTATTTCACTTTTTTTCAGTGTATCTTCAGCTTCCTTCTATACTGAGTTGCACAAGACAGTATTA ATATAAATAAAGTAGAGCTATACTTTAAGTTCCTACCCTGCAAGCACACACTCTGAATTCATTTAGATCTTGTTTCTAGT TTTAGAATTGCCTTCCTTACTTGATTATTACACATGACTTTTACTCCTGTTTCTTTGTAGGCAATGTCATTGTTTCTTGT GGTATGTGCTGTGATCTTTCCATTGGATAAGCAACTCAACGACAACTTATCAATAATAGGAACTATCATGTAAGCATTTA CTTTCTGTTGCTCTTAGAATATAGAGCCTTTGACTTCTTTTTATGATGAATTAGTCACCTAAGCTTTCATAAGCAGCCCT TCTGGTGAACCGATTGAGTATTCCATCTTCAAGAGCAACCTAGCTTGTTTTTCCCTATTTAACTGTCTAAGGTGATAAAG TGCTTGTGCAAATTGAACTCTCTCTCTCTCTCAAAACACTTACATCTAAATAAATATGTTGTAACTTGTGTCACATATTT ACAGGAAGTGGTGTTTTGGACATAATTGGAATTGGCTAAATAACTATATATGATTAGAGTAGTTAACTTACATCTAATTG GATCTACGTGGTAGATATCTGCTTCTTTATATTTTGGGCCTGTGAACACTAAACCCAACAACTATTAACATGACTATATA TTATAGAACAAATATGTTTTGAGATTGTTTCCAGTATTTTGTGGAAGTAGATGGTTCCCTTCATACAATTTTACAGGTAT ATATTCTCTTTTGCAATTGGAGCTGGCCCAGTAACTGGCATCATTATACCAGAGCTTAGTAGTACCAGGACACGAGGGAA GATCATGGGGTTCAGTTATTCAACCCATTGGGTGAGAATTAAAACGTTATTTTTTCTTCTATTAAAAGCTCTTTTTTTTA TCTGTCACTTCTCAGTTGGTACTTGTCATGAAACATTCCAGGCTTCTAATTTTAAATTTTATGCTTTATATCAAGGTATG CAACTTTGTGGTGGGATTGTTCTTCCTTGAGATGGTGGAGAAATTTGGAGTTGCACCAGTATATGTCAGCTTTGGAGCAG TTTCCCTGTTAGCCGCATTATTTGCCTATTACTTCATAGTAGAAACTAAGGGGCGCTCTCTAGAAGAAATTGAAAGGTCC TTAAACCCAAAAGCTTGA
CDS sequence (LotjaGi6g1v0022400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCAGGTTGCTCCAACAAAATATCGGGGTGCCCTAGGGTCCTTTAGTCAAATTGGCACTTGCCTTGGCATTATTGC TTCACTATTTCTTGGAATTTCTTCTGAGAACGATCCACATTGGTGGAGGACAATGCTGTATATTGCAAGTATCCCTGGTT TTATTGTTGCACTTGGTATGCAATTTTCTGTTGATAGTCCACGCTGGCTTTGCAAGACTGGGAGAATAAATGATGCTAAA ACAGTAGTACGTGAGCTTTGGGGAGCATCTGAAGTTGAGAGTGCAATTAAAGAATTCCAGTCTGTTAGCAAGAATGATGG TAGGGATTTGGACAGCAGATGGTCAGAGATTTTGGAGGAGCCACATTCTAGAGGTGCACTTTCTGCTTTATACTTGATCG ATAGAGAAGGGAGACAAAAACTTTTGATTGGAAGCTACTTAGGAATGGCAATGTCATTGTTTCTTGTGGTATGTGCTGTG ATCTTTCCATTGGATAAGCAACTCAACGACAACTTATCAATAATAGGAACTATCATGTATATATTCTCTTTTGCAATTGG AGCTGGCCCAGTAACTGGCATCATTATACCAGAGCTTAGTAGTACCAGGACACGAGGGAAGATCATGGGGTTCAGTTATT CAACCCATTGGGTATGCAACTTTGTGGTGGGATTGTTCTTCCTTGAGATGGTGGAGAAATTTGGAGTTGCACCAGTATAT GTCAGCTTTGGAGCAGTTTCCCTGTTAGCCGCATTATTTGCCTATTACTTCATAGTAGAAACTAAGGGGCGCTCTCTAGA AGAAATTGAAAGGTCCTTAAACCCAAAAGCTTGA
Protein sequence (LotjaGi6g1v0022400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFQVAPTKYRGALGSFSQIGTCLGIIASLFLGISSENDPHWWRTMLYIASIPGFIVALGMQFSVDSPRWLCKTGRINDAK TVVRELWGASEVESAIKEFQSVSKNDGRDLDSRWSEILEEPHSRGALSALYLIDREGRQKLLIGSYLGMAMSLFLVVCAV IFPLDKQLNDNLSIIGTIMYIFSFAIGAGPVTGIIIPELSSTRTRGKIMGFSYSTHWVCNFVVGLFFLEMVEKFGVAPVY VSFGAVSLLAALFAYYFIVETKGRSLEEIERSLNPKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 127 | 127 | 9.7E-24 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| ProSiteProfiles | 1 | 262 | 262 | 9.953 | ||
| CDD | 3 | 260 | 258 | 9.5632E-56 | – | |
| SUPERFAMILY | 3 | 90 | 88 | 2.62E-9 | ||
| PANTHER | 3 | 126 | 124 | 9.0E-152 | – | |
| PANTHER | 3 | 126 | 124 | 9.0E-152 | – | |
| Pfam | 4 | 118 | 115 | 2.6E-16 | ||
| Phobius | 12 | 33 | 22 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 34 | 44 | 11 | - | – | |
| TMHMM | 45 | 64 | 20 | - | – | |
| Phobius | 45 | 64 | 20 | - | – | |
| Phobius | 65 | 140 | 76 | - | – | |
| PANTHER | 125 | 276 | 152 | 9.0E-152 | – | |
| PANTHER | 125 | 276 | 152 | 9.0E-152 | – | |
| SUPERFAMILY | 125 | 271 | 147 | 1.7E-20 | ||
| Pfam | 128 | 271 | 144 | 1.7E-33 | ||
| Gene3D | 128 | 276 | 149 | 3.4E-39 | – | |
| Phobius | 141 | 162 | 22 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 163 | 173 | 11 | - | – | |
| Phobius | 174 | 196 | 23 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 197 | 207 | 11 | - | – | |
| Phobius | 208 | 228 | 21 | - | – | |
| TMHMM | 209 | 231 | 23 | - | – | |
| Phobius | 229 | 239 | 11 | - | – | |
| TMHMM | 236 | 258 | 23 | - | – | |
| Phobius | 240 | 259 | 20 | - | – | |
| Phobius | 260 | 277 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0022400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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