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LotjaGi6g1v0033800.2

Overview

Field Value
Gene ID LotjaGi6g1v0033800
Transcript ID LotjaGi6g1v0033800.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Oligopeptide transporter, putative; TAIR: AT4G10770.1 oligopeptide transporter 7; Swiss-Prot: sp|O82485|OPT7_ARATH Oligopeptide transporter 7; TrEMBL-Plants: tr|A0A151TQL7|A0A151TQL7_CAJCA Oligopeptide transporter 7; Found in the gene: LotjaGi6g1v0033800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:6309534..6316886) extracted from Lotus japonicus Gifu genome v1.2.

GTATCTAACAAGGAGGAAGAATTAGAAGATGAGAAAAATGAAGAAGATGTTGTTGAGATTGATGAGAATGAGAACTCGCC CATCAAACAAGTGGCCTTAACGGTTCCAACAACCGACGACCCTTCTCTCCCTGTCCTCACATTCCGAATGTGGGTGCTGG GGACTCTCTCATGTGTCCTCCTCTCATTCCTCAACCAGTTCTTCTGGTACCGCACTGAGCCCCTCACCATCACCGCGATC TCTGCTCAGATCGCGGTGGTGCCATTGGGTCAGCTCATGGCTGCAAAAATCACCACACGCACCTTCTTCAGAGGCACACG CTGGGAATTCACATTGAACCCTGGTCCATTCAATGTCAAGGAGCATGTCCTGATCACTATCTTCGCAAACTCCGGCGCTG GCACCGTCTACGCCATTCATGTTGTTACTGCTGTCAAAGTGTTCTATCAAAAGCACATCTCGTTTTTTGTTTCTTTGCTC GTAATCTTCACAACTCAGGTAGGTAGGTATGTTGTAATTAGTTAGTTATTTTGACTTGTAGGTAGGTAACTAATTAATAT ATCTGCGCATCAACCGTTCTACCACCTAACCTTTTTCTTAATTTCCCACTTCAAGCAACAATAATAGTTATAAATAAAAC TTGGTAATAAAAAAATGTTTCTCTCTGCAGATTAATTTTACTACAGAAAGAACATATGGTAGATAACTTGTAATAGATTT TAGCATTAAAAACACAGTATATGAGTATCAATTAAGTAGTAATAAGTAAAAAAATAATTAATAACCATTTTTTTTTTGAA ATTAACTAATAACCAATCTAATCTTGTTCTTGCATTTCATTTCCAGCTCCAAATTCGTGCGTTCTGCATTTTTCATTGTC GATATATTTGTTTTTGGTTACATCTTTGTCGATATATAATATAACATTGAATTAAATGTGTCCCGGTGTTGTAGGTGTCG AACGACTTATGTCGCTTTTTTCGATTTTATTGGGGCCTTTTCTAGTAGAGTAGAAAGCTTCCTTGTGTTGCTTACCGGCT TTTGTTAGTTAGGTTATTATACCAATGTTTAGAGGAGTTGTTTCTCAACAAATTATATTTATATATATCTACTATTATCC TATCAAAAAAAAATAACATTGAATTAAATGGCAGGTATTAGGTTTCGGATGGGCTGGCATATTTAGAAGGTATCTGGTGG AGCCAGCGGCAATGTGGTGGCCAGCAAATTTAGTTCAAGTTTCACTCTTCAGGTAATGATATTACATACAGTAACAAAAT AAAGGTACGTACTTGGTCAATTGTAAGAGAGTTATACAACTAGTAACTTAGTCTTTAACACATAATACAAAATATCTAGA CGTACCAATAACATCATTGCATAAAAATATCTTCCAATTTATTTGCTTCCATTACTGACTTACTGTCACATTCCTTGTTG CTTGAACAAGTTGTATACCTAGCTTGCAGATACATTGTTTCGTTTTTTCGAGAACTCATTTGCATTAATTAAGTGTGGAC AGAATATCCTTTTCAACGGCCCCAAAATATGCTAAATTTCTAGAAATATATTCATTTCGTCAAGCTATCTCATTATATCC TCCATTGATATCTTCTCATGAAATCACATTTGTTTTTATGTAAATTCATGATTCACAAGTTAACACGATTTAAAAAAAAA AAACAATTTTAGCATGCAATGAACACATTATAAATAATATGTATTGATCGTTAATTATAAAAATATGGTTTATAAATACA TGAAAAATAATATTTAACAAGTTTAGCAAGATTCACCATACTTTAAAAAGTTTCAAAAAAACCATACATTAAAAAAAACC ATAGAACTATTCTTCTTTCTTATATTATAACACGTCATGAGCTTTGATGTTGAATCTCATTAAGTCAATATTTTATTTCA TAACTAATTATTCAAATATATCATTAATTTTACACTCAGCAACATATTGTTTTTTGTATGTCTTGGCATTTTATTAGCTA TTTATCATTATCATTATCATTATATATAATAAAAACCACACATTTTGGGTTATGTCCCGGTTTGTAATTTTTCTATAATT AAACTTATTGAAAAGTAATTTCAAATCTCATGATTTTTTCATAAAAATACACTTCCTGAAAATGAAAGTAGGCCTATACT GTGAGTACTGACCTGTCTCAGTCACTATACGACGGGAGAAAGAAAGAGACTGCATCTGAATTCTGAAAGGCACATGCACT TTCCCTTTCACATACATGCTGTGTTATAAAAGGATTTCTTTGTCAAGGATACTGTAGAATTTAGATTCATCTCAGATTCC ATTCATCCAACGATATTTTGTTTTTTTTTTCGAAAGGGAAAAAAATCCAACGATATTTTGTTTATTTATTTATCTTTGGA TTATTGAGCAATATTTAATTATTTATGACAAAAATATATGAATTTTATTTACATATATGTTTTATATCAATTTTTGTAAA TATATCTACCAAATATAAATTTTAAATATGTTTTATTTCATAAAACATATGAATTTTATTAGTATATTCATAACAATGTA AATAATTTACACAGGGCCGGCCTTGGGCCTGTGCAAGCAGGCCCACAGCCCAGGGCCTCCAAAAAGAAGGGGCCCCAAAA AAAAATTTGTGAGATATATTTCTAAAATATATAAATTATTAATGTTCGAAAATATTCTAATATAGTGAGCTAGTTCAATG GAAAAGCACTATGCTCTGGAACCTGTGTGGTACAGGTTCAAATCCTCCTGGGGGTAATTTTTAGACATTAATTCTATATA GCGGTTTTTAAGAGCTTAATTAGCATTGAAATGTGAAAGGTTTCCTTGGGTTCTTCTACCTAATTTACTAGATAAGTGGA TATTAATTGGTGAACCAATTAACTCTGAAAATGCTTAATGGGTTAGCATTGATAGCAATTGAGAATAATATGTTGGAGAA TATACAATATGAAAATTGATTGAAAGTTTTGCTTCAAAAAATGCTAGGAGAGAGGCTTTTTTTAAGTAGTTAAATTTTTT TTTGGATTATATTGACTAGAATATGAAATTTTGTTTATGTTAGTCACATATTTTTGAAGTTGTTGATGTTATTTATAATT TAAATAGATAATGTTTTTTTTAAAAAAATTATTGGGGGTCCATTTTTATTATTTGTCCAGGGCCTCCAAAATATCGGGAC CGGCCTTGAATTTACACTAGATATTTACCAATAGGGTTTATCTAAGTGATGCACTCTTAATTCTCTTTAAGCAAATTATC GGTTCGAGCTTTGTGATTGTAAAAATCACATTGGAAAAACTAGCCCCATCAAGAGTTGGATATTCCTAGTTTGAAGAAAA TAACCTCTTTTACAAGGATACTTGTGGTCAAATTAATTTATTTTTTAATAAAAATTCAATCACATTTTCTATTGTACTTT TTTCATTTTGAATTAATTTGGTTATATGATAACACATTGGAACCTAATTAAACATTTATATAAAATTTATTTACATGACG AGTAAATATTAATTTAATATTTATATATAAGATATGTTTTAGGCTTAAAAAGTTTTATGTATTAGACTTTCGGCTAGGTG TAGTTTTACCCTAAAAGCTTGTTTCAAGATATGTACATTGCCTATATTAGCCATATCTCGTGGAAGAGTGTCATCGATGA TCTGGATCATATTTTCGTTGTAAAAACCATGAACATTGATCTGGACCACGAATGATCTGAGAATAGGGTGAAGTCTAATC GAGAATCAGATTTGCCATAGAATCGAGCCAAGAGAAAAGGTATTCAAAGATGAAAATATGCCAATTTGATCAACCGATGA TCAAAGAAACAGAAACTGAATGAAGATTGAAGTTGATCAAGCTGAAAGATGAATATTGAAGACGATCAAGCTTGAAAGAT GAATGAAAATCGCGTGTTTGTGAGAATCCACAACGTAACCCCAATTCAAGACTCTTGACACCAAATCGAAATTCTAACTG AATTACATTTATTTTTTAAAAGATAAAATTGTATCGATAAAAAATAGCTTATATAGAAGAGCTATCTCTCTGATTTGACT AACTTGAAAAGAAACTAACTCTAGTTAGAAAAAAGTAGTTAACATAACTAATTCTTAGCCAAACATTTAACCAGTGCTGA GTAATATATATCATTGTTAACAAATGTGACACTTTTCAATATTCAGTGTTATAATGTACTAAATGTACATATTGTTTTTT TTTTATTGTGAAATGGATGTATAATATTGTAATTCATTTTTCCATTTACATTACCCAGGGCCTTGCACGAGAAGGAGAAA AGGACAAAGGGATCGTTAACACGATCACAATTCTTCGTTGTGGCATTCTTGTGCAGCTTTGCCTACTACGTCTTCCCTGG CTACCTTTTCCAAATGCTGACCTCTCTGTCTTGGATATGCTGGATATTCCCCCACAATGTTTTAGCCCAACAGCTTGGGT CAGGCCTATATGGGCTTGGCATCGGTGCTGTTGGGCTTGACTGGTCTGCCATCTCATCCTACCTCGGAAGCCCACTCGCG AGCCCGTGGTTTGCCACAGCCAACGTGGCAGCCGGGTTTGTGTTTGTGATGTATGTTCTGACTCCACTGTGCTATTGGCT CAATGTGTATGATGCCAAAACGTTCCCAATTTTCTCAGATGATCTTTTCAAGTCGAATGGTCAGATTTATAACATTACAG AGATAATAGACTCCAATTTCCATTTAGACTATGCAGCATATGAGCGACAAGGGAAGCTCCACCTTAGCACTTTCTTTGCC ATGACCTATGGTGTTGGCTTTGCTGCACTTACCGCTACCATTGTACATGTTGGTCTCTTTCACGGAAGGTAAATTTGTTA CTCTCAATTCCATTAAATCATGTTATCCTCACCTTATTTTTATATAGATTGTGATGGCTTATTTTAAGAACCGAATTGAT AATAACCAACCATTAGTTCATTTTAAGAACTAGTTACCAAATTGAAAATACGGTTCGGTTCATATTAAACAAATCAATAC GGTTTGGTTCGGCTGAACCAAAAAACTGGTTAGGTTAGGTTTCGATTCAATTCTGCCTGAACCCATACCATTTACACCCT TATTGACGAGTATGCCCAGAAAAAATGAACGAATTTGTTAATCTGTACCACCAACGACCGAACTGAACTAAATTGATAGT TACCGATCTATTAGCTTATTTTAATAACTAGGTCACTAGATTGAAAATGCGGTTTGGTTCGATTCATACTTGAAAATTTA ATTTGGTTTGGTTCATCTGAACTAGAAAACCAATTTGGTTTCGGTTTAGTTTCTGCCCGAACCTGAACCATGAACAACCT TATTAATATGAAGAGATGATAGATATAAGTGATATATGTAATGAGACCGAAAATGAGAGACAGAGGAAAAAAAGTCGTCA TGAAATGTATATATACTATGTTTGGCGGTACATAAAAAAATTTATACCTGTCATATACTCATATGTCATAGATAAAATTG TATTTGTAGCACTAGCTGGTACGCATGTAGACATTATTAAGTATGAAATTGAATTGAAAATATAGAGAAATATGGGAGCA AAGCAAATCAAGTTTTAAGGAAAAAACCATGGACATCCACACCAAGCTCATGTCAAGGTACAAACAGGTTCCTGAGTGGT GGTTTGTGTGCATACTCATCGCAACCATTGCAATTACCATCTTTACTTGTGAATATTACAACGATCAGTTGCAGTTGCCT TGGTGGGGTGTTCTTCTGGCTTGTGGCATTGCTATCTTCTTCACTCTCCCCATTGGAATTATAACTGCAATCACCAATCA GGTAATTTGTAGATAAAATTGCATGTTTAACACATCAAAATGTTACACTATATGGTTTCTTTTTTTTTTACTGGCTTTAT ATTGACTTTCCATATGTAACTACAGACTCCAGGATTGAACATAATCACAGAGTACATCATAGGGTATATCTACCCAGGAT ACCCTGTAGCTAACATGTGCTTCAAGGTTTATGGTTACATTAGTATGACTCAAGCCATTACTTTCTTGCAAGACTTCAAA CTTGGCCACTACATGAAAATCCCTCCCAGAACCATGTTCATGGCACAGGTCAGTACGTATAGATTTAGCTTTAGTTTATG GAGTAAATCCCTGAAATGTTTTGGGTCGGCCAGTTTATCTTTAAAAATAAAAAATTACATTTCCCTTCCTTTAAAAAAAG ATGAATCAATATAGTCCCTTTTGCAACATTAATTAATTAATTAATTCATGAGAAAGGACTACCATTGATAGTTTCTTTCA TGTTTTTAGAATGAAAAAAAGTAATAATTTCTATTTTTCAAGACTAAAATGAAATGACCGACTCGATAATTTTTCAAGAC TAAACTCATATATAACAGTTAAAATTTTCTTACATATATAGTCACCGACGAAATAGAAATCTTCTGTCTTTATTTGGTGT TTTCTTCGCCATCTCACTAATAGAATTATGCTATATCAATTAAAAACATATATGAATATAACAACTATAATTTTACATGT GTGATTTTTAAATAACATGTCATAATTTATGGATGAGATATGGAAAGAGACACTAGACAAGGATTGAAGATTTGGATTTT GGATACAAGCAACATAAGTCAATTACTATGGAATAAAAGTAGCATAAGAAAAAAAGTGCACACAAGTTAATGACTAATTG CTTGAATGTTATTAATTGATTAATTAGGTTGTGGGGACGTTTATTGCTGGTTTTGTATACCTGGGAACTGCATGGTGGTT AATGGAAACCATCCCAGACATATGCAAAGACACATCCTCTGTTTGGACATGTCCAAGCGACACAGTATTCTACGATGCAT CAGTTATCTGGGGTTTGATAGGGCCTCGAAGAATATTTGGAGACTTGGGCACATACTCGAAAGTGAACTGGTTCTTCCTG GGTGGAGCAATTGCTCCATTCCTTGTCTATGTTGCTGCAAAAGCCTTCCCACAACAAGAGTGGATCAGACTCATCAACAT GCCGGTGTTGATAGGCGCTACCGGAATGATGCCGCCGGCAACCACGGTGAATTATACGAGCTGGATCATTGCTGGGTTCT TCTCCGGGTTTGTTGTGTATAGATACAGGCCAGAGTGGTGGCAGCGTCACAATTATGTGCTCTCTGGGGCCTTGGATGCG GGTCTTGCATTCATGGGGGTGCTTTTGTATCTTTGCCTTGGATTGGAGGATGTTAGTATCAATTGGTGGGGGAATGACCT TGATGGTTGTCCCTTAGCTCATTGCCCTACGAAGAAAGGATTTGCGGTTGAAGGTTGTCCCATTTTCACTTGA 

CDS sequence (LotjaGi6g1v0033800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGGTGCTGGGGACTCTCTCATGTGTCCTCCTCTCATTCCTCAACCAGTTCTTCTGGTACCGCACTGAGCCCCTCAC CATCACCGCGATCTCTGCTCAGATCGCGGTGGTGCCATTGGGTCAGCTCATGGCTGCAAAAATCACCACACGCACCTTCT TCAGAGGCACACGCTGGGAATTCACATTGAACCCTGGTCCATTCAATGTCAAGGAGCATGTCCTGATCACTATCTTCTAT CAAAAGCACATCTCGTTTTTTGTTTCTTTGCTCGTAATCTTCACAACTCAGGTATTAGGTTTCGGATGGGCTGGCATATT TAGAAGGTATCTGGTGGAGCCAGCGGCAATGTGGTGGCCAGCAAATTTAGTTCAAGTTTCACTCTTCAGGGCCTTGCACG AGAAGGAGAAAAGGACAAAGGGATCGTTAACACGATCACAATTCTTCGTTGTGGCATTCTTGTGCAGCTTTGCCTACTAC GTCTTCCCTGGCTACCTTTTCCAAATGCTGACCTCTCTGTCTTGGATATGCTGGATATTCCCCCACAATGTTTTAGCCCA ACAGCTTGGGTCAGGCCTATATGGGCTTGGCATCGGTGCTGTTGGGCTTGACTGGTCTGCCATCTCATCCTACCTCGGAA GCCCACTCGCGAGCCCGTGGTTTGCCACAGCCAACGTGGCAGCCGGGTTTGTGTTTGTGATGTATGTTCTGACTCCACTG TGCTATTGGCTCAATGTGTATGATGCCAAAACGTTCCCAATTTTCTCAGATGATCTTTTCAAGTCGAATGGTCAGATTTA TAACATTACAGAGATAATAGACTCCAATTTCCATTTAGACTATGCAGCATATGAGCGACAAGGGAAGCTCCACCTTAGCA CTTTCTTTGCCATGACCTATGGTGTTGGCTTTGCTGCACTTACCGCTACCATTGTACATGTTGGTCTCTTTCACGGAAGG TACAAACAGGTTCCTGAGTGGTGGTTTGTGTGCATACTCATCGCAACCATTGCAATTACCATCTTTACTTGTGAATATTA CAACGATCAGTTGCAGTTGCCTTGGTGGGGTACTCCAGGATTGAACATAATCACAGAGTACATCATAGGGTATATCTACC CAGGATACCCTGTAGCTAACATGTGCTTCAAGGTTGTGGGGACGTTTATTGCTGGTTTTGTATACCTGGGAACTGCATGG TGGTTAATGGAAACCATCCCAGACATATGCAAAGACACATCCTCTGTTTGGACATGTCCAAGCGACACAGTATTCTACGA TGCATCAGTTATCTGGGGTTTGATAGGGCCTCGAAGAATATTTGGAGACTTGGGCACATACTCGAAAGTGAACTGGTTCT TCCTGGGTGGAGCAATTGCTCCATTCCTTGTCTATGTTGCTGCAAAAGCCTTCCCACAACAAGAGTGGATCAGACTCATC AACATGCCGGTGTTGATAGGCGCTACCGGAATGATGCCGCCGGCAACCACGGTGAATTATACGAGCTGGATCATTGCTGG GTTCTTCTCCGGGTTTGTTGTGTATAGATACAGGCCAGAGTGGTGGCAGCGTCACAATTATGTGCTCTCTGGGGCCTTGG ATGCGGGTCTTGCATTCATGGGGGTGCTTTTGTATCTTTGCCTTGGATTGGAGGATGTTAGTATCAATTGGTGGGGGAAT GACCTTGATGGTTGTCCCTTAGCTCATTGCCCTACGAAGAAAGGATTTGCGGTTGAAGGTTGTCCCATTTTCACTTGA 

Protein sequence (LotjaGi6g1v0033800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWVLGTLSCVLLSFLNQFFWYRTEPLTITAISAQIAVVPLGQLMAAKITTRTFFRGTRWEFTLNPGPFNVKEHVLITIFY QKHISFFVSLLVIFTTQVLGFGWAGIFRRYLVEPAAMWWPANLVQVSLFRALHEKEKRTKGSLTRSQFFVVAFLCSFAYY VFPGYLFQMLTSLSWICWIFPHNVLAQQLGSGLYGLGIGAVGLDWSAISSYLGSPLASPWFATANVAAGFVFVMYVLTPL CYWLNVYDAKTFPIFSDDLFKSNGQIYNITEIIDSNFHLDYAAYERQGKLHLSTFFAMTYGVGFAALTATIVHVGLFHGR YKQVPEWWFVCILIATIAITIFTCEYYNDQLQLPWWGTPGLNIITEYIIGYIYPGYPVANMCFKVVGTFIAGFVYLGTAW WLMETIPDICKDTSSVWTCPSDTVFYDASVIWGLIGPRRIFGDLGTYSKVNWFFLGGAIAPFLVYVAAKAFPQQEWIRLI NMPVLIGATGMMPPATTVNYTSWIIAGFFSGFVVYRYRPEWWQRHNYVLSGALDAGLAFMGVLLYLCLGLEDVSINWWGN DLDGCPLAHCPTKKGFAVEGCPIFT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 320 320 0.0
Pfam 1 320 320 1.8E-70
Phobius 1 3 3 -
Phobius 1 33 33 -
PANTHER 1 320 320 0.0
TMHMM 2 21 20 -
Phobius 4 15 12 -
Phobius 16 33 18 -
TMHMM 26 48 23 -
Phobius 34 83 50 -
TIGRFAM 78 320 243 1.2E-53
Phobius 84 107 24 -
TMHMM 85 107 23 -
Phobius 108 147 40 -
Phobius 148 181 34 -
TMHMM 148 170 23 -
Phobius 182 192 11 -
TMHMM 190 212 23 -
Phobius 193 213 21 -
Phobius 214 219 6 -
Phobius 220 245 26 -
TMHMM 222 244 23 -
Phobius 246 294 49 -
TMHMM 292 314 23 -
Phobius 295 315 21 -
Phobius 316 326 11 -
PANTHER 320 357 38 0.0
PANTHER 320 357 38 0.0
TMHMM 324 346 23 -
Phobius 327 348 22 -
Phobius 349 353 5 -
TMHMM 353 375 23 -
Phobius 354 373 20 -
PANTHER 358 387 30 0.0
PANTHER 358 387 30 0.0
Phobius 374 384 11 -
Pfam 383 547 165 1.1E-33
PANTHER 384 584 201 0.0
PANTHER 384 584 201 0.0
TMHMM 385 402 18 -
Phobius 385 403 19 -
TIGRFAM 385 550 166 1.3E-50
Phobius 404 449 46 -
TMHMM 450 472 23 -
Phobius 450 468 19 -
Phobius 469 474 6 -
Phobius 475 492 18 -
TMHMM 492 514 23 -
Phobius 493 497 5 -
Phobius 498 515 18 -
Phobius 516 526 11 -
TMHMM 527 549 23 -
Phobius 527 546 20 -
Phobius 547 585 39 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0033800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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