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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0035800 |
| Transcript ID | LotjaGi6g1v0035800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT3G13560.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4; TrEMBL-Plants: tr|I1MWK5|I1MWK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0035800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:7016703..7023024) extracted from Lotus japonicus Gifu genome v1.2.
TCGGTTTGGAATTGCTATTGCATAAGAAAAAAAAGAAAAAGAATGGCTTTTGATTTGTATTGGGATTGGAGGGAAAATCA ATGGTAGTGGCACGCATAACATAAACATAAACGTCTCAATTTTCAACTAAAGTGCTGTTACAAAGACAAAAGGAGTGAAA ACTGGAAAAAAAAGGTACAGCTCCCAAACCCAACTCAACCAATCTATAAATTCATGTAAGTATATTTTATATGGCAAATA GTAAAGTTTGATTGTAAAGCACTAAAGCTTGTGCTAACCTCATGTTTCTCCACCTTCTGTTGCTTCTTTGTTATCACAAA TATCTATCTTCTCATTCAGCAATACTTCATTAGTGCTTGTATTTGTTAACTATTGTCTATTGACTCTGTTTATTTAACTT ATGACTTCGTTTGATTGCTGAAGTACTAAAGAAGATTTCACTTCTTCAGGCTTCATCTGGCAACAATATTAAGAGTGATG AAGCTTATAAAGTTGCTCACCAGTGTTTTGTTGCTCATGGTTGCCACTGTGAGCAATGCAAAAGGTAATATATGCACCTT TACCCTTTTCTTTTCTTGTGGGTCTGTCAGATCTTTTATAAGTATCAAGGAGAATGATATTCTGTGGTGAACTATTGCAA GGTTCACCTTTATACCATGGCTTTTCATTTGTAAAGGCTGCATTATCAGTTAATTTTTTACTTGGAAATATTTATAAACT ATTTTTTAATGGTCCAAATAATTTTTCCTTCATAGATCCATATTCCTTCAACTGGTGTTTCCTGCATCATCTAATTTAAT TTGATAGTTAGGAGCAATAGTTTAAAGCTTAAAAATTTTCATTGTCTTGAATAAAATATATTGACCCTATGCCTGGCACA TTTTGCTGTTTAGTTATTTAAGAGTGAACCCTCAAATTCGTCCAACGATACAGAGTTAGGCAGGTTCATCCATGAAAGAA AGAAATGCTTTCGGAAGTCCATGAATGTGTTAAACTGTTAATCATCCCTCAAGTTGGTCTCTCCGTCACTTCAAAAGTTG TTGACCAAAGTGACAGATGAACCAACTTGACTCACAATTGACACATTCACCCACTGCTCAAGATATTTTCTTTTTCAGGG ACGAATTTGAGGGTTCACTTTTATTTTAAGGTTAGGAGTTAGAGACATAGAGTGCTTGAAAGGACAAGCAAGAAATAAGT GAGTGCACATATTTTCTTAGTTGAAGGTAGATCACACATTCTTGATTCTTGATCATGCAGGTGCATTTGTGGGGGTAAAC ATTGGCACTCATGTTTCTGATCTTCCATCTGCTTCAAATATGGTTACCATTCTAAAAGCTCATCAAATCACTCATGTGCG CCTATTTGATGCTAATTCACACATGCTACAAGCCCTATCAAATACCAGCATTGAAGTGATTGTTGGTGTCACTGATCAAG AAATATTAAGGATTGGAAAATCTCAATCAGTTGCTGCATCATGGATCAACAAAAACATAGCTTCTTACATGCCATCAACA AATATCACAGCAATAGCAGTTGGTAGTGAGGTTCTAACCTCAGTCCCAAATGTTGCCCCAGTTTTAGTCCCTGCCATGAT TCATCTCCATAAAGCTCTGGTTGCTGCAAACCTAAACTTCCGAGTTAAGGTTTCGACGCCGCAGTCCATGGATATAATCC CTAGGCCTTTTCCTCCTTCTGCGGCCGCCTTTAACTCTTCATGGAATTCCACAATTCACCAACTCCTTCAGTTTTTGAAG GACACAAACTCATCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAGAGGAGATGGCATTTTCCCAATTGAGTA TGCACTTTTCCAATCCCTTTCTTCAGTGAAGCAAATTGTTGACTCAAACACACTCTTCCATTATAACAGCATGTTTGATG CTATGGTGGATGCTACTTATTATTCAATAGAAGCCTTCAATTTCAATAACATACCCATCATTGTCACAGAGACTGGTTGG CCAAGTTTTGGTGGAGCTAATGAACAAGATGCAACTATAGAGAATGCTGAGACTTACAATAACAATTTGATTAAAAGAGT TTTGAACGGTTCTGGTCCTCCAAGTCAACCAAAGATACCAATTAACACCTACATGTATGAATTGTTTAATGAAGACATGA GAAATGGTCCTGTGTCAGAAAAGCATTGGGGTGTTTTTTATACTAATGGAAGTGGGGTTTATCCTTTGAGGTTTGGTGGT GCTTCTAACCATAATATTGGAAATTCTTCAGCATTGTTTTGTGTGGCTAAAGATGATGCAAGCACTGAGAAGCTGCAAGG TGGTTTGAGCTGGGCTTGTGGACAAGGCCAAGCAAATTGTATGGCTATTCAAGCAGGGAGGCAGTGCTATTTCCCCAATG ATGTGAAGAGACATGCTTCTTATGCTTATAATGATTATTTTCAGAAAATGCATGGTGCTGGTGGTACATGTGACTTTGAT GGTACAGCTACAACAACTAACGAGGATCCTAGTAAGTCCATTTTTATTTTTTGATTCCATTCTTATTGCATGTTCTGCTT GTTTGGAAACTCGTCCGAAAGCTACAGTGAAGCCAAAATCACAGTGGATAGAAGCAACTTCCCTTAGCTTTTGCTTTTAT CCACCATGATGTAGCTAATGTAGCAAATGCTTTTCAAATTGCACACTTTCACAATTACATCAACACAGCACATGCTTGGA TGAGTGTCCTAAGAATCAATTCTGAGATTATGGCAAAACTGAACTGATTTATATTTGGATACACAAATGAGAAAATTAAT TTGTGTAGACTAATGTTATGCAATCCAACTATCAAATCCTATAATTGATTAAATCCATATATAGCAGAGCCTAGGTTTTA ATCGTGGAGAATCAATACTGAAATTTATAAATGCACATCCAATTACGCCTTCCTTGGTTAAACATAAGCTGGATGAGTGA AAGTAAAATCTTGGATTAGGAGATCAATCTCTCTTTTTCTTGAGGCAGCTTGGTGTCATTCGTGAATCCCAGGCTTGAGA ATAAAACCTCATTTAACTTCACAAGTCCTAGAAACGTCTTCTTATTGCAACCTCAAACTGATTAACTTGGATTGCATAAT TTAGAAACTCCTAAAGGGGGTAGAAAATTGTGGTGGATTCTTTCCAAAATTTCTAAACTTGTGAGGTTTGGATTTAGTGC TGTCAAAACCCCTTAAGTCACTGCAGTCATGACTTTATAGCCATGCAAATTTGAAAAAATCAATTTTATGTGAACGTGAT GATTGTCATTTTAAATCCGGCTACTAAACTTTGACTGCAGTGACTTGAGGGGTTTTCGCAGCACTAAATCCTAGTTACTA TTTCATTCTTTTATGTTTATGACTGAAATGCTTATTTCTGATCATTGACATGACCTCGTGTTGAGGGTTTGAAGGATGAG AGCTAAGCAACTAACAATGGTTCTCTTGTTGCAGGTTATGGATCCTGTATATATGCGGGAAGGTGAGAATGTGACTCTCT CTTTGTACACCCATTATCAATTAGATTTACAAGTTATAATCGTGTTTAACTTTTAAATCTAATCAATTGAATATTTTCAT GTCAGTTCTATCTTGAGCACTGGAGGTGGGAGTTTGCCTTCTACGGCACTTGGACCTATAGGTCCTGTTGGTGTGAGTTT GAAGCTGCAAGTGTCAAACCTTCCATATTTGTTATCTATTTCTAGTGTTATTTTTGCTCTGGTGCTGTAATGGTCTTAAG GTCCATATGCTTTTAGCATGAAATTCAATGATCATTTGAATGTATTTTTGCTCTTCACATCTGTATACTTATCGTATGAT GGTCATTGTGATGTATACTCTCAAGGTATGTAGTTGCAAAATTTAGTGCTTTAGGATAAGCCAAACGAGATATTGGGCCT TCAAGAAATGACTGTCATTGTTCGTTAGACAAAACTAAATACCCCACCCACAAATTCACATACACTGATACACACCACCT TGAATCCTGTAACTTATAAAAATATCCTCAGCATTTCTGAGTTTTCATTCCTGAATAAAATTTAATTGGGAAGCTATTCC TGAAAAAAAATTGGGAAGCTAGATGTACACATTTCTTTCCACAATCTATTATTTACCGCATACGAGTCAAAAATTAACTA CCTCAACATATGTCCCACGGAAGCTAAATAACTAACAGCCACAAACTTAGTGAAGTTTTATTGAAGCACTGCATTCTAGT TTGTAGTGTGTACGAAAGCACAACATACCGCAAACTAAAATGCGGTAGTTTAATGTACAACAATCGGTGTAATACAACAA ATCAGTTAGCGAGTAAGAAAATACACAAGATGGATAGAAAATTCAACATCATAGCCGATTTAAACATTGTAGATGGGATT GAAATTTACCATAAATAATTATACAATTCAGGCTTCCCTCACTGATACAAACACTCATTGATTGCTAATTTCGGTCAAAC TGAGTCATCAGATTCATCAGAGTCACTCCTATCAGGATCCCCTGCATTTGTAAGAGTCTCCGGAGCATCATGCTTTGGTT CAGGTGTAGGTGCAGTTTTTTTATTAGCACCTCGCACATTCTCATCCCCTTCTTGCTCAGCTGCTACCACATGTGAGTCT CGGTCAAGGAAATATCCAAAGTTAAGCTTTTTTACACTATCAATAAATCAACAAAGTATGTGCTCGGTTTCACTTATGGA AACCACATCTAAGTCAGAAAATCATGTTAAATCACAAACTAAAATGTGCATCTTTTGAGATAACATGCTCTAGAGTGTAT GTGCCACATGCACATAAAACAGACTAAAACTTCATTTTGCCATTGATGCAAAATACTATTCTGGTTTATCCCATGAACCC AATGCAAAGGAGAGAAAAGCTAATGTGTTAAAAGGGGCAAAAGAGTAAGCAACGACAATGATCTCATCAACCATGAATTT CTAAGAGAAATTTTTTGAAGTGGAGTCATAAATTTGTATCTAAGATTCGGGAAGTTCTATAAATAGATGTTTGAAACAAA AAGGACAAAAAGATATCAAAATTGTCAGCAACCATGAATTTAAAAGAGAGAAATCTTAAAGTGGAATCATACATTTGTGT ATCTAATCTTAGAATGCTCAATAATAAGCTTTTTGAAACAAACAAGACAAAAGGATATCAAAACTGTCAGCTGTTCCTCC TGCCATGATTTTGAGAAGGTCTTTCTCAACACGGGATACAAGCTCAGGCTGCAAAATGAGGGGAAATTAAGGTAACTAAG AGATCGAACATGCTGACACACACATATACATTTAGAGAGGTAATGCTAAGTTAACATTATGCGAAAGAACAGCATACATT AAGATCAGGTTCTCTGCGGAATCTACGCTTGCGAGCATCTCTCATGGGAGGGGTAAGGCCATGCCTGTACTCAATCTCAT CTGGAGCAGCATCACCAGATTCCCTCACCATAATCATCTGTTAGTTGGGTTCATAATGCAGGCAGTTAGTAAGTTGTATG AACCTAAGGAGTAAAATTACGACAGAGAATAATTATGGATACTTCACCTGACCAATATCAGCACTCTTAATCAAAGAGTT GTCATCATAAGTCTTGTATGATTCAACGACACAAGGAAGGTCTAATAAAGAAGCTGGGAAGTGCTCATCCTCGATCGCAA ATGTACCGCTCCTTCCATCCTCATTAAATGACAAATCTAATGACTTGTCTTCAGATGAAGAAGGATTGTTTTCATTCAGA AGACGCTCTATCCGCTCCGCGACATTAGGTGGAACTCTAAGTATGAATTGCTCCTCCATAACTTAAACCACTAGGTTGAG TTTGGAATCGTTACAAATGGGAAATGATTTGATCTAGAAATCACATAACAGACTTTAATTCAGTTGATTTACAAAAATCT ATAAAACCTAGCGCAAGTAAGATAAAATAAGGAGAACCAGAAGAATCAAAAAGCATAACAGAATGTAACCGTAATATAAT CATTGACAGCAAAATCAACACAAGATAGTGATCAATTATACAAACAAGAACATGAAAAAATCAAAGCCGAACCCTAATTA TAATTGAAAACATACAGAGAGAGAGAGAGAGACGAAGAGAATGAGAATGAAACCCGGAAAATTGGCGGCGACGGTGGCAG GGTGGCCTGAAGTTGGTGGCGAGCGGTGGCAGAAGACACGTGGTAAGGGAGGAGGGATGGATTTTCGATTTGAGAATGAG AAACAGACAGTGAGTCTATTCCCTCTGTATTCTTTACACAACCGACTACCGAGAGAAAGAGATCAGTAAATTTTTTTTCC CG
CDS sequence (LotjaGi6g1v0035800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTATAAAGTTGCTCACCAGTGTTTTGTTGCTCATGGTTGCCACTGTGAGCAATGCAAAAGGTGCATTTGTGGG GGTAAACATTGGCACTCATGTTTCTGATCTTCCATCTGCTTCAAATATGGTTACCATTCTAAAAGCTCATCAAATCACTC ATGTGCGCCTATTTGATGCTAATTCACACATGCTACAAGCCCTATCAAATACCAGCATTGAAGTGATTGTTGGTGTCACT GATCAAGAAATATTAAGGATTGGAAAATCTCAATCAGTTGCTGCATCATGGATCAACAAAAACATAGCTTCTTACATGCC ATCAACAAATATCACAGCAATAGCAGTTGGTAGTGAGGTTCTAACCTCAGTCCCAAATGTTGCCCCAGTTTTAGTCCCTG CCATGATTCATCTCCATAAAGCTCTGGTTGCTGCAAACCTAAACTTCCGAGTTAAGGTTTCGACGCCGCAGTCCATGGAT ATAATCCCTAGGCCTTTTCCTCCTTCTGCGGCCGCCTTTAACTCTTCATGGAATTCCACAATTCACCAACTCCTTCAGTT TTTGAAGGACACAAACTCATCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAGAGGAGATGGCATTTTCCCAA TTGAGTATGCACTTTTCCAATCCCTTTCTTCAGTGAAGCAAATTGTTGACTCAAACACACTCTTCCATTATAACAGCATG TTTGATGCTATGGTGGATGCTACTTATTATTCAATAGAAGCCTTCAATTTCAATAACATACCCATCATTGTCACAGAGAC TGGTTGGCCAAGTTTTGGTGGAGCTAATGAACAAGATGCAACTATAGAGAATGCTGAGACTTACAATAACAATTTGATTA AAAGAGTTTTGAACGGTTCTGGTCCTCCAAGTCAACCAAAGATACCAATTAACACCTACATGTATGAATTGTTTAATGAA GACATGAGAAATGGTCCTGTGTCAGAAAAGCATTGGGGTGTTTTTTATACTAATGGAAGTGGGGTTTATCCTTTGAGGTT TGGTGGTGCTTCTAACCATAATATTGGAAATTCTTCAGCATTGTTTTGTGTGGCTAAAGATGATGCAAGCACTGAGAAGC TGCAAGGTGGTTTGAGCTGGGCTTGTGGACAAGGCCAAGCAAATTGTATGGCTATTCAAGCAGGGAGGCAGTGCTATTTC CCCAATGATGTGAAGAGACATGCTTCTTATGCTTATAATGATTATTTTCAGAAAATGCATGGTGCTGGTGGTACATGTGA CTTTGATGGTACAGCTACAACAACTAACGAGGATCCTAGTTATGGATCCTGTATATATGCGGGAAGTTCTATCTTGAGCA CTGGAGGTGGGAGTTTGCCTTCTACGGCACTTGGACCTATAGGTCCTGTTGGTGTGAGTTTGAAGCTGCAAGTGTCAAAC CTTCCATATTTGTTATCTATTTCTAGTGTTATTTTTGCTCTGGTGCTGTAA
Protein sequence (LotjaGi6g1v0035800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLIKLLTSVLLLMVATVSNAKGAFVGVNIGTHVSDLPSASNMVTILKAHQITHVRLFDANSHMLQALSNTSIEVIVGVT DQEILRIGKSQSVAASWINKNIASYMPSTNITAIAVGSEVLTSVPNVAPVLVPAMIHLHKALVAANLNFRVKVSTPQSMD IIPRPFPPSAAAFNSSWNSTIHQLLQFLKDTNSSYMLNAYPYYGYTRGDGIFPIEYALFQSLSSVKQIVDSNTLFHYNSM FDAMVDATYYSIEAFNFNNIPIIVTETGWPSFGGANEQDATIENAETYNNNLIKRVLNGSGPPSQPKIPINTYMYELFNE DMRNGPVSEKHWGVFYTNGSGVYPLRFGGASNHNIGNSSALFCVAKDDASTEKLQGGLSWACGQGQANCMAIQAGRQCYF PNDVKRHASYAYNDYFQKMHGAGGTCDFDGTATTTNEDPSYGSCIYAGSSILSTGGGSLPSTALGPIGPVGVSLKLQVSN LPYLLSISSVIFALVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 6 | 16 | 11 | - | – | |
| PANTHER | 6 | 460 | 455 | 1.6E-260 | – | |
| PANTHER | 6 | 460 | 455 | 1.6E-260 | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 496 | 475 | - | – | |
| Gene3D | 26 | 347 | 322 | 1.0E-111 | – | |
| Pfam | 26 | 347 | 322 | 4.1E-78 | ||
| SUPERFAMILY | 26 | 346 | 321 | 1.69E-77 | ||
| ProSitePatterns | 260 | 273 | 14 | - | ||
| SMART | 361 | 446 | 86 | 7.1E-43 | ||
| Pfam | 362 | 433 | 72 | 1.6E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0035800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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