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LotjaGi6g1v0036500.1

Overview

Field Value
Gene ID LotjaGi6g1v0036500
Transcript ID LotjaGi6g1v0036500.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|Q6WUC1|6OMT_PAPSO (RS)-norcoclaurine 6-O-methyltransferase; TrEMBL-Plants: tr|I3TA83|I3TA83_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0036500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:7262274..7265700) extracted from Lotus japonicus Gifu genome v1.2.

GCAATATAAAAGAAATGCATGATACTGGCAATTAATATAAAAAAATACATGTTGCTAATTATTTAGCGCCTATAAATGAA GCCTCGCTTCCTTTGAAGTTTCAACCAAAATCGTTATTACATTGAATAAGAAGGATTTAGATGGGAGAAATACATAGAGA AAAATTGTCACAGTGGGAGAAGGAACAAGAAGAAGAAGAAGAAGAAGCACAAGCTCAAATAGATATCTGGAAATATATAT TTGGGTTTGTGGAACAGGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAGCTCATGGAAAACCC ATGACACTCTCAGAGTTATCATCAACTCTAAGGTGTGACCCTTCATATCTTAACCGCATCATGAGGTTCTTGGTGCGTAG GAAGATATTCAAAACCACAACCTCCACCACGAACCATGGCTGTGATCTCAGCTATGTTCAATCACCTCTGTCTCGCCGTT TGTTGAGAAACGGCGAGCACAGCATGACTGCTTTACTTATGTTGGAGAGCAGTCATGTAATGCTAGCACCCTGGCACGGT CTAAGTGATCGTGTTTTAGTTGATGGCAACCCCTCATTTAAAAAGGTTCATGGTGAAGATGTGTGGGACTATGCCGCCAC AAACCTTGAACATAGCAACCTCATCAACGAAGCCATGGCATGTGATGCTAATCTTGTTGTGCCTGTCATGGTTGAAGGTT GCAGTGAGGTATTTGAAGGTCTCACCACCTTGGTTGATGTTGGTGGAGGAAACGGCGCCGCCATGGGCGTGGTAGCAAAG TCTTGCCCATGGATAAAAGCTATTAACTTTGATCTTCCTCACGTCATTGCTGCTGTGGCCCCAAAGTGTAATGGGGTGGA ATTTGTTGCTGGGGACATGTTTGCTAGTGTTCCCAAAGCTGACGCTGTATTTATTAAGGTACGTATGGCCATGGTAATTT TTAATAGTAATGTTTTGTTCATGTAATTGTCTTATGTGGGTAGCTTAAAGTTAATGAACTAATTAATAAGTTTATTTATA AATAATGAATAGTTATTTTTTAAATTTTAAATTCACTAATCTTGATAATCATTAGTCCATTGGCTTTAGGTAAAAATAAT CACATCAGTGACTAGATAACTCATTTGTCCACACCTACCACTTTAAAGAGAGATAGAATAATAGTTAGAAAAATAAATTA TATAAGAAGTGATATGATAAAAACATTCAAGAAAGAAAGTAACAAAAATTATATAAAATTAAATTATGAGAAAAAGTGAG TGATAAACATATAATAACTCGTAAATTTTTTGTATGTGATTACAAGGTATTTTTTTCTCGTGAAGTAATCTTTATTTGGG CAGATAGATAGATAGATGTTTGTTCCATTTATGCATAATAACTCAAGACTCCAATATTAGACTTTATTTGAGAGTACATT TACACCCTCTCCTCTTATTTATAACTCACATTGTACTGATTATCTACAATTAAAAAAAACCGTTATTATCAATAATTATA TAAAAGAGATAGGATTGTCTCAATCACTCATTCATAAGTAATTTTACCTCTCATTTTAGTGGTTCAATAGATTATCCATA AATAAATATAAAAACAAATTACTTCACTTATCTTAAATATTATGGATCGATCTAAGACTATGATGATTTAACTCAAACTT TCCCTAAGGTCATTTAACCAATTCAAAAAAAAATCATTAACTTCCATTTGTTCCAATTAGATTGTTGTTTTAACTTTTGC TATATTTTTTAAAATAGTTGTTGTTTTACACATCCAATGTATTTTTTCCATTTTCTTCCCTTTATACCCTTGCAGAATAA TTAATTCAAAAGTTTCTTATTAAAGTAACCTACCACCTCACCTACTTAATTAACCTACCACCACTTGCTGGCATTAACTA ATTCAAGAGTTTGAAAAAAAAAATGAAATAAAAGAATTCACAAACAGCACATGGAAATTGAAAAGAATACTCTTCTTATG CTACTATTAGAGCATCTACATCCATCATACTCACTAAAATATCTACACATCATTTTTTTAATTTTCCATAATGCCACATC ATCTACCCTATTTTACTAGTAACTTTTTACTCCAACCCAACAACTCTTAAAAGTTTCTATAGTGGATCTCACCATCAACA TCACATTTGTATATTTTATTATTTATCTCCATTTTAATTAATTGTAAGTGCTTGTAATAAATACAAGCTCACATTTCAAG TCTAGTGTGGAGTATCTATTCCCACATACTCATCTTTGTCATGTTGGAATTGAATATGTACTCCAATGGTAATAGATACA CATATATATGAGTATGTATTTAACATTAGATACTACCATTGGAGATGCTCTTATATTTCTAATAATAAATAAGGGGTTCC ATGATAATTAATTGACTGTACATTTTGTTTATAATTTTGATAGAATTTATATATGTCATTGATTACAATAGTTATTACGT GTAGTGGGTTTTGCATGATTGGGGAGATGAAGAGTGCATCCAGATCTTGAAAAATTGTAGGGAAGCTATTCCGAAGGAAA ATGGAAGAGTTATTATTGTGGAAGCGGTGATTGAAGAAGAAGAAGGAAAACATGACAAGTTAAAGGACGTAGGATTGATG TTGGATATGGTGATGATGGCACATACTAACTTTGGCAAAGAAAGAACATTGAAAGAGTGGGAATATGTCATCAAAATGGC TGGATTTAGTACATTCACGGTGAAAGCTATCAATGCCGTGCAGAGTGTTATTTTGGCTTTACCTTGAAAGCATACTCAAA ATTATGAAGAATAAGGAGACTTCCCATATGTCTCTAAAATGCCGTGCAGAGTGTTCTTCATGTACCACTGCTTTTTAAGA CACTCCCCACACCTACAATTGTCGCAGTTTTTTACCATTACAAATTGATGAGTTTGTTAAAAAAACATACTTTACAAGAG GGTTAGAAATCTCCATAAATTGTAAGTGTTGGATGTACTGAAAAAACACGGGTACATGAATCACTGCTGTTAACATATTG TAGTAAAAAATAAAAACATGATCCATATGTATCCTGTATTGGATTTGCGATCATGAATGTTTCAGTTGTAACAGTATGAA ACCCTTTAATGCCTGTGTACAATTAATGCTTTGTGTGTGTTGGAAATACATTTCATTTTTTATTAAGGTTTATTTAATTT GATAAGTTTATTTGACATTTCTGATAAACGAGCACTATAACTTATTTTGTAGTCTTATCTAAAATGCTTCAAGTTATGTT TGAGTTAATTTTATTTTCAGAAGGAAAGAAATTTATTTCTCCCATAAAACTCTGAGAACATCTCTATATAAGAATTGAAT AGTAGACATCCGTGTCGGTGTAGTGAAAACGTTCAACAAACATTCAATTAGTGCATTTGATACATAT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0036500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGAAATACATAGAGAAAAATTGTCACAGTGGGAGAAGGAACAAGAAGAAGAAGAAGAAGAAGCACAAGCTCAAAT AGATATCTGGAAATATATATTTGGGTTTGTGGAACAGGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCA TTGAAGCTCATGGAAAACCCATGACACTCTCAGAGTTATCATCAACTCTAAGGTGTGACCCTTCATATCTTAACCGCATC ATGAGGTTCTTGGTGCGTAGGAAGATATTCAAAACCACAACCTCCACCACGAACCATGGCTGTGATCTCAGCTATGTTCA ATCACCTCTGTCTCGCCGTTTGTTGAGAAACGGCGAGCACAGCATGACTGCTTTACTTATGTTGGAGAGCAGTCATGTAA TGCTAGCACCCTGGCACGGTCTAAGTGATCGTGTTTTAGTTGATGGCAACCCCTCATTTAAAAAGGTTCATGGTGAAGAT GTGTGGGACTATGCCGCCACAAACCTTGAACATAGCAACCTCATCAACGAAGCCATGGCATGTGATGCTAATCTTGTTGT GCCTGTCATGGTTGAAGGTTGCAGTGAGGTATTTGAAGGTCTCACCACCTTGGTTGATGTTGGTGGAGGAAACGGCGCCG CCATGGGCGTGGTAGCAAAGTCTTGCCCATGGATAAAAGCTATTAACTTTGATCTTCCTCACGTCATTGCTGCTGTGGCC CCAAAGTGTAATGGGGTGGAATTTGTTGCTGGGGACATGTTTGCTAGTGTTCCCAAAGCTGACGCTGTATTTATTAAGTG GGTTTTGCATGATTGGGGAGATGAAGAGTGCATCCAGATCTTGAAAAATTGTAGGGAAGCTATTCCGAAGGAAAATGGAA GAGTTATTATTGTGGAAGCGGTGATTGAAGAAGAAGAAGGAAAACATGACAAGTTAAAGGACGTAGGATTGATGTTGGAT ATGGTGATGATGGCACATACTAACTTTGGCAAAGAAAGAACATTGAAAGAGTGGGAATATGTCATCAAAATGGCTGGATT TAGTACATTCACGGTGAAAGCTATCAATGCCGTGCAGAGTGTTATTTTGGCTTTACCTTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0036500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGEIHREKLSQWEKEQEEEEEEAQAQIDIWKYIFGFVEQAVVKCAIELGIAEAIEAHGKPMTLSELSSTLRCDPSYLNRI MRFLVRRKIFKTTTSTTNHGCDLSYVQSPLSRRLLRNGEHSMTALLMLESSHVMLAPWHGLSDRVLVDGNPSFKKVHGED VWDYAATNLEHSNLINEAMACDANLVVPVMVEGCSEVFEGLTTLVDVGGGNGAAMGVVAKSCPWIKAINFDLPHVIAAVA PKCNGVEFVAGDMFASVPKADAVFIKWVLHDWGDEECIQILKNCREAIPKENGRVIIVEAVIEEEEGKHDKLKDVGLMLD MVMMAHTNFGKERTLKEWEYVIKMAGFSTFTVKAINAVQSVILALP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Coils
Coil
2 29 28 - –
PIRSF
PIRSF005739
7 366 360 6.7E-126
IPR016461
Gene3D
G3DSA:1.10.10.10
11 114 104 7.4E-29
IPR036388
PANTHER
PTHR11746
13 364 352 3.3E-159 –
PANTHER
PTHR11746:SF98
13 364 352 3.3E-159 –
SUPERFAMILY
SSF46785
20 117 98 2.73E-23
IPR036390
ProSiteProfiles
PS51683
30 366 337 74.481
IPR016461
Pfam
PF08100
41 85 45 2.1E-13
IPR012967
Gene3D
G3DSA:3.40.50.150
116 366 251 6.0E-72 –
SUPERFAMILY
SSF53335
119 363 245 3.34E-53
IPR029063
Pfam
PF00891
138 348 211 7.5E-56
IPR001077
CDD
cd02440
203 294 92 0.00330545 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0036500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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