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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0047600 |
| Transcript ID | LotjaGi6g1v0047600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT3G02690.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q93V85|WTR16_ARATH WAT1-related protein At3g02690, chloroplastic; TrEMBL-Plants: tr|A0A151SZB2|A0A151SZB2_CAJCA Putative transporter sll0355 family; Found in the gene: LotjaGi6g1v0047600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8717595..8723866) extracted from Lotus japonicus Gifu genome v1.2.
AAGAATAAGAAAATAATAACGTGGACACGTGTCACATGGATACCGTTGCTTCGTGGAGATTAGCTCAGTCAGCAGGTGCA TGTTAACACTTGTGGCAATACGCAACTCAACACCCTGTTCTAGCCATGGCGTCGTGGTGGTGCTCCTCCCTCTCCGCCAC CGTCTCCGTCACAACAACCACCGCCACCACCACCACCCGCCGCTATCCTCTAATCTCTCACACTTCCCAATTCCACACCA ACCCATTCCCACCTTCTCCCCCATCCTCGCTCCGATTCAGGCTTCCATGCTCCAACAAATCCACCGTAAAAGCCAGCAAA CCACCCCCCTCCGGCACCGACGTGGATTGCGTCGGAACAGGGCAAAACGCGGAGTGCACCGTCAACTTGGAACAACAAGA CGGAAGCGCAAAGCAAGAAGATGAGTCATCGCCGGCGACGATGCTGTGTCTCGCGGAAGGGCTTTGGGAATTGGCGGTGC TGGTGTCGCCGTTCTTCTTCTGGGGTACCGCCATGGTGGCCATGAAGGAGGTGCTTCCGAAGTGCGGCCCGTTCTTCGTT TCGGCGTTTCGTCTCATCCCTGCAGGGTTCCTTCTTGTTGGCTTTGCAGCTTCTAGAGGCAGGCCTTTACCCTCTGGTTT CAATGCTTGGGTTTCCATCTCGCTCTTCGCTCTCGTTGATGCTACTTGCTTTCAGGTTTCTCTTCTGTCACTCACTGCAT GGATCTCAGTTTGGTGAATCGTGAATGAATTTAATGCTGATTGATTGGTTTGTTTGCTGTAATCAATGTGACAGGGTTTT CTAGCAGAAGGGTTGCAGAAGACTTCAGCTGGTTTGGGCAGCGTATGTTAGCAGTTAATTTCTTTATCAAATTATTTGGT GTACATTTGGGTGGCTTTAGTATTATGCTGAAACTGGTTAAATTACTCTATGAAATGCTGTCTGTGTCATGGTGATAGGA TAGAATTAGAAGAGAAATTTACTTTGATTGTGATGAACTTTGTTTTGATTCAAATTCTACATTACAATTCTGATGGCAAG ATATGTTGCTGACTTTGACTGTGTGTGGTTGATATATTGCAGGTTATAATTGATTCACAGCCTTTGACAGTGGCTGTACT TGCAGTTTTGTTATTTGGTGAGTCAATTGGAGTTATTGGAGCTGCTGGGCTTGTTCTTGGTGTCGTAGGACTTGTGCTGC TCGAGGTAAACTTTGATTGTTCCTTTCATTTTAATTTCAACCAAAAAAAAGTGAATTAACCATCATACCCGTTAAGAACG GCCCAGAATTAGCAGTCAAATTCTTATATATCTAATGTAAGAAGAATATAAAGGATATGTTTTGCATTAGTAGCAGCTAG CACTCCAGAGTATACTATTCCCAAGCTTAGTTTCTTTTTTTTTGAAATATACAATTTCTCTAGCCTATCAAATGACTTCC ATATATTATTTGGTAACACGAGCATTACTACTGTTTTTGTTGCAGTTACCCGCCCTATCATTTGATGAAAGCAACTTCTC ATTGTGGGGAAGTGGGGAGTGGTGGATGCTTCTTGCAGCTCAGAGTATGGCAGTTGGTACGGTCATGGTTCGGTGGGTCT CTAAGTACTCTGATCCTATCATGGCTACTGGATGGGTGCGCTTCAAATCTCATTTTGACTCTAGTGTTTGTTATATGTGA ATTACCATTGTTCAATACCCTATGAAACTTAACTGAATGGTTAATGTTCCTTTTTTTTTCAATCTAGAACTAGAAGTCAA TTTGAATTTATTTAAATCTTTGAAAGTAGGGAAATGACACTGCATTTCATATTGATTCTTTTGTCACAAAAAAAGATTTC TAATTGTTTAAGAGAAGAGAAAAGGGACAGGTGAAGGGAGGAAGCCATATAGCACATATGATGTCATTGTTTAAGAACTC TGTCAAAGCAAACTCAAAACTTTGCAATCCATTTTGTTGCAGCATATGGTTATTGGTGGTCTCCCTCTTGTGGCATTAGC AATTTTTAACAATGATCCTGCTGTAAGTGGGACTCTTGAGTACAGCTCAAGTGATATATTGGCACTCCTCTACACGTCCA TTTTTGGAAGCGCTGTTAGCTATGGTGTGTTCTTTTACAGTGCAACAAAAGGTCTGCATATCTCTCCTGTCATGATCTTT TTCTCGTCTTTTTATCTTCACCAATGAGATTCCTTCTATGATCACTTAAATATATCCGTGTTAAATTGAAAATGGTTAAT TTCTTCTCCCATATTGTAATCACTGTGTTACTGACACGTCTTTAGCTATAATTTGTACACTCATCTAGGAAATTTCCTTT TTTGTTCTTTTCCCCCTTAAATCCACGCAGACCCGTAAAAAGTTCACGATATTGACATTCCATTGTGATGCACTGCAGGT AGCTTGACTAAGCTCAGTTCACTGACATTTTTGACACCAATGTTCGCTTCAATTTTTGGGTAAGTAACAATGGGAAAGAG TCAAAGGATTTTCAAGTACTTTTAGATATTTGGAATTATATAGCAAAGAGAATAAAGATTAGAAATAACAATTGATGGGT GATATAGCTCTTTACCTGTAAGGCCATTAAGGAGAAAAAAGTGACAATCTTTTATAACGAAATTTTGGAAGAGAATTACA ACCGAGAAGCATCCTTCATAATTTTTTGCAGTAATGTTTCGTCACTCATCAGGATCATAATTTTCTTTGTATCTTTAAGG CTTCAACCACCGGCATTTCGTCTAGAAATTCTTATGTTTTCTTTCAAAGTTTAGGTTTGTGTATCTTGCTGAGTGCCTAT ATATGACATAATTTGCTTTCGTGTTTCAGGTTTCTATATCTTGGTGAGACCTTCTCACCAATACAACTAGTTGGGGCCAC TGTTACGGTAGCTGCAATATACATGGTTAACTCCAAAAACAGTTCAGAGTAAATTATATAGCCACTTTTTTACCGGTTCT TTCAACATATTAACCCAGGGGAAAACAGTTGCTCGGGTGACTAGAAGCTTGTCAAGAACTCAAATTGGGAGTGCTTTTAG CAAGTTTGGACATGAAGAGAAATTTGAGTGGTATACAATCTTGAGAACTTGTGGTCACGCTTTATAATGTAAATACAATT TTGATTAGTTGTTACTTGTTAACTTAGGTTCGAGCATTCACAGGCATCATATAGCAGAATCTTGTAAGTTACTTGGGTTG AATAAGAGCCTTATCAGGAATACATTGTTTCTGTGAAGGTTATCTTTGTTGTATAAAATGACTTAGTGTTGTATAAGTAT AATGAAAGAATAAGAATGTATAGATTATTTGTACATTGTGATTTGGTGAGAAATACCCATTGTGTGTAAGTGCTGCTAAT TGTGATATGTAATGGATTTATTGGAATCCAGAAAACAATGTTTTAATACTCAGAACTTAGTATCTTCAATGTGGGGTCAA CGCAGCCACTTATCCTAATTCCTAAAGCTACAAGTGAGAGGAACAACAAAAAGCTTTCATATAAACCTTAATTAAATAAA AACTTATTGCAAAGTGTGCAACTCCAAACAGAAGAAACTTGAACTCATGGAGTATTTAAGATACAAGATGAAGGTGAATT CATTTATCACATCTATGTGGATTCAGCTGCTGTGACAACAGGTCTCGTGTGAAGAACTTTATTGCCACCAACCCTGCCAC GCCCTATTCTGCTCCCATGCTGATGATCACACACATTCTTTTTGCTATTCAATTGATTCCTGGCTCCATCCACATCACGT GCTGCCTCACGTGACACCCTCCCTTCCAAGCCTAATGGAAGTTTCTGACCCTGCTCTCTGGAGTTGTTCAATCTTGAAGT GCAAAGATATTTTGAATCACCAGAACTAGGTTCCCATGAAGAAGAAGAAATGCCCTGAATGTAGTGCTGTTGTTGAGTGA AGCTGTTGCTTCCTGAAGACTCTTGGTCCTCCATGTCTACCCCACCAAGTGAACCATCCCTATTCACTGTTACATAGTTA TGTAAACTCGGTTCCATCACATCATCATTGACAAATGACTCATATTCTGCAAGTGGATCCTTGGTATCTGGCTCTGGCAC CCTCTTCCCATGATCATTGGTAGTACCAAATAGAACATTGTATTCACTCTTACTAGACTGGTAGCCATGTCGACTGCAGT TTGAGCTGGTATTGGAGTTAAGATCAGCAACAGCTTCAAGGATGGCACAAGCCTTGGTGACACAAGCTGGGAGAGAAACA GGTGGTGTGTTCTTTTGATGGAAGTTATGGATATCTTCAAGCAGTAGTGAGGTATAGGACTGTGGTGGAGGATTCAACAA AGCTTCAGGATTGAGGTCTAAGTCTCTGGATCGCCTAGAAGATCTGCTTCTTGTTAATATCGGGGGTTTTAGGTTGTCAA CCGCAGATGTTATCACTGTCTTCACAACAACATTATCAGTCATGGAAGACTGCACTTTAACATCTTCCTCTTGTTGCACT TTTATCTTGCAATTTACATCAAGTCCCTTGTCCATTGCAGCTCTGCAAGCATTTGGTTTCTGCAGTAGGGGGGGAAAACA ATATTACATTATTACATCAATCAAATAACATCAATAGGACAAATTAGTAATAGCATGTCTGGATCATGTTCGAAATCAAT TCTGACACTCAAAAGTTACTCACAAAATCTTCTCAGCAGAAGGCTTTAAAATCAATTCTAGAAAGATTTCAAGCATGCTA TAAACAAGAAAGGTATAAATCAGTTAATACCTGATTAGCTTCTGTTTCAATTTCCTTTTTGGGTCTGTTTTGCACCATGC TGCTGTTATTATTAGCTGTTGAATGTGGAAAAGCAAGGTTGTTAGGTTCAACCTCACTAAGAGGGATTCTCCTATAAGGT GAATGTTCTGCTTTCTTTGAGGAGTTCCGGCTAAGAGATGGATGCTGCTGATTCTCACTCAATGCTTTATTAGCATTTGC TGCATTCCCATTTGCTCTTGCAGGGGACTGAGAACGTGGAGAGGCTCCACCTACATTTCTCTTAACCATGATCCTCTTGA CGCCTGTGCTTGTTGCAAATTCTCCACCACCATTGTTACTCTTATCCATCACAAGGGATGAAACAGTAGCAGGAACAGAA ACCATCTTTCCAGGCCTAGTAGAACTGGTATTATTGTTACTGTTTCTTGCATTGGCAACAGGTGTAGTGGTCTCTGATGA TCTTCTTCCAGGGGATCTACTAACTCTTCTCTCTCTGCTGCTTGAACGTTGCTGCTGCTCTCTTTCTCTGCTTGGTGTTC TTCTCCTACTTCTTTCCAGAGAAGAAGACCTTGAAGATTGGCGGTGCCGCTGCCGTTTCTCAGCAGCAGCTATCCCATCA TCCTCACACAAATCACTTCTGTTGACATTGGTATTTGCTTCCTTTTGATCCTCCTCAGTGGAAATGGTATCATTATCATC ACAGTGGTCAAAATCATGACTTCTTCTCTTTGAACCTGAGTGCCTTCTCCCAAAACCACCAGAAGAAGAAGTAGCTTGTT TTCCTGAAGAGTTTCTGCTTAGTCTCCCACACTGTATAAGAATTGCATCCACCTCTTCTTTGGTGCAGCTTGAAGTCCTC ACAACCACACCCATGTTTGCTGCTCCTGCTGGTGATTGTGCAATCCTGTCATGCATTTCTTCAAATGGTTGGTGGGCATT TTGCTGTGACCTGGAATTTCTTTCTCCACCATCATCATGGCTCTTCCTGTGTTTGATGATGAATATCTCCTTTTTCACAT GCCCTTTAACTTCTTTCTCCTTCTTCAGATTAGCTTGTGGCTCAGTTCCCATTTTGGGTTTGGATAAAGGGTCACCATTT CCAGAAGAATTCTTAGATGGTGGGGTAGCTGAGTTGGGTTCAGCAATTGGGGTGGAGGGAGAAGACTCTTTCTTTTTACT CAAACATGTACCCATGGAAATTTGTGATTTGAATTGGCCTAGTGAATGGAGCTAGAGAAAGAGATGGTTGAAGAAAAAAG GAAGGTTCATGGTAGGGGATTGGATTTGATAAAGGGGAAGGGGGTGTTTGGAACAATGCCCAAGAAGCATTTTTGGAAAA AGATTCTAGCTTTGTGGTTATTGACCATGAGAGAGAGAGAGAGGGAGAGAAAACATTCAAATTTTGATAGATAGGGCGGG CTGTAATTCTGTCACATAGATCCGTTGACAGGTCATGGTATATTGTCTGATCCCACCAAGTCACTGACATAAATTTCAAA ACCCCTTCTCAAGATTCCACCAAACAAAAAAC
CDS sequence (LotjaGi6g1v0047600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCGTGGTGGTGCTCCTCCCTCTCCGCCACCGTCTCCGTCACAACAACCACCGCCACCACCACCACCCGCCGCTA TCCTCTAATCTCTCACACTTCCCAATTCCACACCAACCCATTCCCACCTTCTCCCCCATCCTCGCTCCGATTCAGGCTTC CATGCTCCAACAAATCCACCGTAAAAGCCAGCAAACCACCCCCCTCCGGCACCGACGTGGATTGCGTCGGAACAGGGCAA AACGCGGAGTGCACCGTCAACTTGGAACAACAAGACGGAAGCGCAAAGCAAGAAGATGAGTCATCGCCGGCGACGATGCT GTGTCTCGCGGAAGGGCTTTGGGAATTGGCGGTGCTGGTGTCGCCGTTCTTCTTCTGGGGTACCGCCATGGTGGCCATGA AGGAGGTGCTTCCGAAGTGCGGCCCGTTCTTCGTTTCGGCGTTTCGTCTCATCCCTGCAGGGTTCCTTCTTGTTGGCTTT GCAGCTTCTAGAGGCAGGCCTTTACCCTCTGGTTTCAATGCTTGGGTTTCCATCTCGCTCTTCGCTCTCGTTGATGCTAC TTGCTTTCAGGGTTTTCTAGCAGAAGGGTTGCAGAAGACTTCAGCTGGTTTGGGCAGCGTTATAATTGATTCACAGCCTT TGACAGTGGCTGTACTTGCAGTTTTGTTATTTGGTGAGTCAATTGGAGTTATTGGAGCTGCTGGGCTTGTTCTTGGTGTC GTAGGACTTGTGCTGCTCGAGTTACCCGCCCTATCATTTGATGAAAGCAACTTCTCATTGTGGGGAAGTGGGGAGTGGTG GATGCTTCTTGCAGCTCAGAGTATGGCAGTTGGTACGGTCATGGTTCGGTGGGTCTCTAAGTACTCTGATCCTATCATGG CTACTGGATGGCATATGGTTATTGGTGGTCTCCCTCTTGTGGCATTAGCAATTTTTAACAATGATCCTGCTGTAAGTGGG ACTCTTGAGTACAGCTCAAGTGATATATTGGCACTCCTCTACACGTCCATTTTTGGAAGCGCTGTTAGCTATGGTGTGTT CTTTTACAGTGCAACAAAAGGTAGCTTGACTAAGCTCAGTTCACTGACATTTTTGACACCAATGTTCGCTTCAATTTTTG GGTTTCTATATCTTGGTGAGACCTTCTCACCAATACAACTAGTTGGGGCCACTGTTACGGTAGCTGCAATATACATGGTT AACTCCAAAAACAGTTCAGAGTAA
Protein sequence (LotjaGi6g1v0047600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASWWCSSLSATVSVTTTTATTTTRRYPLISHTSQFHTNPFPPSPPSSLRFRLPCSNKSTVKASKPPPSGTDVDCVGTGQ NAECTVNLEQQDGSAKQEDESSPATMLCLAEGLWELAVLVSPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVGF AASRGRPLPSGFNAWVSISLFALVDATCFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAVLLFGESIGVIGAAGLVLGV VGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVALAIFNNDPAVSG TLEYSSSDILALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPIQLVGATVTVAAIYMV NSKNSSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 111 | 91 | - | – | |
| Phobius | 112 | 131 | 20 | - | – | |
| TMHMM | 112 | 131 | 20 | - | – | |
| PANTHER | 114 | 405 | 292 | 1.1E-135 | – | |
| PANTHER | 114 | 405 | 292 | 1.1E-135 | – | |
| Pfam | 116 | 246 | 131 | 8.0E-21 | ||
| Phobius | 132 | 142 | 11 | - | – | |
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 143 | 162 | 20 | - | – | |
| SUPERFAMILY | 148 | 249 | 102 | 7.45E-13 | – | |
| Phobius | 163 | 173 | 11 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 174 | 193 | 20 | - | – | |
| Phobius | 194 | 213 | 20 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| Phobius | 214 | 246 | 33 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 247 | 265 | 19 | - | – | |
| Pfam | 263 | 401 | 139 | 4.9E-26 | ||
| Phobius | 266 | 285 | 20 | - | – | |
| TMHMM | 266 | 285 | 20 | - | – | |
| Phobius | 286 | 291 | 6 | - | – | |
| Phobius | 292 | 312 | 21 | - | – | |
| TMHMM | 292 | 314 | 23 | - | – | |
| SUPERFAMILY | 297 | 404 | 108 | 6.8E-13 | – | |
| Phobius | 313 | 331 | 19 | - | – | |
| TMHMM | 329 | 351 | 23 | - | – | |
| Phobius | 332 | 352 | 21 | - | – | |
| Phobius | 353 | 358 | 6 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 359 | 378 | 20 | - | – | |
| Phobius | 379 | 383 | 5 | - | – | |
| TMHMM | 382 | 401 | 20 | - | – | |
| Phobius | 384 | 401 | 18 | - | – | |
| Phobius | 402 | 407 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0047600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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