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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0048400 |
| Transcript ID | LotjaGi6g1v0048400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin response factor; TAIR: AT5G37020.1 auxin response factor 8; Swiss-Prot: sp|Q9FGV1|ARFH_ARATH Auxin response factor 8; TrEMBL-Plants: tr|I1LM27|I1LM27_SOYBN Auxin response factor; Found in the gene: LotjaGi6g1v0048400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8843367..8853456) extracted from Lotus japonicus Gifu genome v1.2.
ATCATCCAACGGTCCACGTTTCTCCAAAACATGACTCTCAAACCTCACCTTTCTCTCTCTACTGCATCCATGTCCACCTT GGTCGGGCCCCCCTTATATATACCGCAAACACTTTTCCTTTCCCTTTCTCTCTCTCTCTCTCACTCTCATCACTCACTCA CTGTGTCTCACACAAACTCCTCTCTCAATCGACAGTGATAGCAAGAGGGTCCTGGTCCTGCCTTTACTTTCATTTCACCA CTGCACTGCTAGCTTTCATGCTGATCTTGGAGACTGTGCCGCCACTCTTGCAGGTTAACTCCAATTGGGTTTCTGGGTTT GCTTGAAAATTTCCACTACAAGGGTTAATAAACAAACCCTTTTGCTCCTCCCTGCTGTTTGTTGGGGTGGTTTTCTGGAC ACTGGTTGTTGTTGTTGTTGTTGTTGTTCTGAATTTAATTTTTTAAAGCTGATGTTGGTTTTGGGGTATGGATTGCATTG GCAGTGACAGTGAAGAAGATATTGGGGAATGCAGCAATGGCTTGAAGAAGGAAATTGAAGTTACTTGTTGCTTTCAGCTA GGGTTTTATGTATTTATGTGATTGCCAAATAGAGTGTGTGTTTTTCAAAGGTAAAGCTAGATAGATGAAATGAAGCTTTC AACATCAGGGTTGGGTCAGCAGGGACAAGAAGGTAACCCTTCTAATTCTTCTCCTTTTTTATTCCCCCTTTTAATAAAAG AAATTGAGCAAGCATTCTGAGTTCCTACTTTGGCTTCTAGTCACATACATGTGTATAAGTTTTGGTTGTCCCTATCATAC ATACCCCTTTTGTGTTGCTTCAACATTTTTACTTGTAATTTTTTTTCTTCATTTTCTCTTTTTGATAATTTGATGTGAGT GTAATGATGGTAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCATGCATGCGCGGGGCCCCTGGTGTCCCTACC AACTGCGGGGACTCGTGTGGTTTACTTCCCCCAGGGTCATAGTGAGCAGGTTTCTTGCTATCCCCTACTTTACATTCAAG ATGGTTTCAATTTCTATGCGACAGAAGATACAATATGTTTCTACCAAGTTTGATTTTGAAAGAAAAAAAACACTTCTATA AATGTAAAATGAGATGTACATGTTGAATGTTGATTCCAGGTTTCTGCCACTACTAAAAGAGAAGTTGATGGGCACATGCC CAATTACCCAAGCTTACCACCTCAATTGATCTGCCAACTTCACAATGTCACAATGCATGTGGGTATATTATCTCAGTGCA TGTTTGGATACATAGTGGAAAACCAGGGTGAAGTCAAAGCCAAAATCATGGTGGACAAGAGCAACTTCCATTAGCTTTTG CAACTGTCCACCATGATTTTGGTCCTTGGATACATAGTGGAAAACCACGGTGAAGCCAAAGCCAAAATCACGGTGGACAG GAGGAGCAACTTCCATTAGCTTTTACAACTGTCCACCATGATTTTGGTCTCACTATGGATTTGCACCGTGTATCCAATCA TGCATTCATTCTTTATAGTTGAGTTATGGTTGCTTACCTTTAAGAGTAAACCCTGTGTACTGGAGCATGTTTTGATTTTC AGGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACACTGCAGCCGTTGACTCCGGTATCCTGCTGTTGTTTAAGC AGCTTGTTTTATGCATTATGAACCTCTCTTTATGTTTCTTGGATCAAAATTTGTATTTTTATCTGTTGATACAGGAAGAG CAAAAGGATACATTTCTTCCTATGGAATTGGGCCTTCCAAGTAAGCAGCCTTCGAATTATTTTTGCAAGACTTTAACCGC CAGTGACACCAGTACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCTCTGGTAGAAATCA CTTGTTGCTTTTGTGTTTGACTCTAGAAGGAAATAGATGCATTTTCATCTTATATTTGAGCTATACAGGATTTCTCCCAG CAACCACCTGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAATGGAAGTTTAGACATATTTTTCGGGGTAGGAT TCTAACTCCAATGTTATGATCTTTTCATTCTATGGTGTGGATTTTATTGTATTGAAGAATACTATAGCAAAATATATTTA CTTGTTGCTTACCTTTTCCTTTGGTAGTTTCCTATAGTTTATCAAATGTGTTTGGTTAGTCCGTCAGCTTCAAGACCAGT GTTGTTAATCGCGGATTGCGGATCGTGGAAAGCCAAAAATCCTCTATTTCAAGTCCTCATAGGGAAAGTAGCGGACAATA GTGGCAAATAGCGGAATAGCGGTGAGCCCTCAGAGCGCTACACTATAGTGCCGCTATTTGTCAACACTAATCAATCCTAA ATCCTAAATCCTAATATCAGTCAGCTTAAACAAAATTAGTTAACCTTAAACACTTCGCTGTCCAATAGTGGTTGTCGCTG TTACTTGAGGAGCTTCAATGATTCCCAAACTCGAGTGCTCTAACCATGAATTATGAGCATGTTGTTGGGCTGAATAGGAG ACTTTGCTGTTGTTGTCAGAAAGTTTAACATCATTGTAGAAATTATAGTCTTTGGGATATATGCTCCTAGTCTCTTACCA CTCCAATGAAGATCTAAATTCTAATCCCATTCGGATAGTAGTCAATAGCGCGCTATAGCGGGGTAGCGAAGCGGCTCCTT GTTGCTATTGAGATAAAATAGCGCGCACCTCACAACAGCGGCTGTAGCGGCAGATCGTGGGAAATAGCGGCGCTATATGG AGGAAGGGGAAAATGACTCAAGCCCCTCGGTTTTAAATCGTTGGGGAACCTTTTTAGGGGCATTTTAGGACTTCTCAGTG CCAATTTAGGTCAAACTTGGAAGAGTGAAGCTTCATTCTTCATTCAAAATTGCAAATGAGACCTTCTCTTCCCTCTTCTC ACTACTCACTTTGCCCTCTCACCTTGGAGCTCCAAGGACCACCCCCTTCTCCGGCGACCATCCTTCACTAGGGACCACCC TTCACTAGTGACCACCCTTCAGTGCTAGAAGATGATAATGAATGATTTCTTATGTTGCTAGGAGCCTAGGAACTCTTATT TCAATGTTCATGTTCATGTTTTGGCACTTTAAGCCTTAGAGGCTTGAACTTGTTTTTAGTTTTTACCTTGCTTTAGAGTG GTGTTTAGTTGTGTTATTGTTCAAGATTTATGACTTTTATTGCTATTATGAATGTTATGAACTTTAGGCATTATTGACAT TTTTTGGTATTTATATGTATATAGTATTAAACTATTAATTATATAAACTTATATATTAAAAAATCTGAATAGCAGCCATC TCGCTAGTCGCTATGCGCTATCCAGCTATCCCACTTTTGAGGCCGTCCGCTACGCGCCGCTACCGGGATTGACTACTATG CTTCGGAGTCATTTGAATCTGAATGTTGGCTAAAAGGAAATATAATGGCAGTGTTAGGAATTTCTGTCTTCCCTCATAAA TATGGAGATTTTGTCTAATACTTCTTGTGTCTCCTGGAGTCCAAAAATCTGTCCCTAAATCTTTCATATGTAAAAGATTC TGCGCTTTTTTTTTTTTTTAAAAAATTTTGCTACTTGCCTTAAACTACATTACAAACAGTGTTTCAACCAGATTCCAACA GAATAAACTTTATCCGGTCGAAGTTGTGTTCTCTTTTAGAAAATGTCCTGCAAATTAGCCACAAGTGGAATCACATAATG ATCAATTTCATGGAATTTGAAAAGGAAGCTGTGGATTGGTCCAATTGTGTACATTTTAACTCTTAAAAACTAGACAATTT TTATAAACATGGCAACCAGTTAAGCTAACTTTCCACTAGGAGCATTAGCTTCTGAAAAGGTAGTTCCAAAAATTAGTTTT TCAGTCTTGTTCTTGTCCTTATTATTATCTCATGTCAGGGAAACTTATTTAATACTCTTTTAATATTTGGTGGTTGAACT GTTTAAGAGAATATGGGCCAGTAAATGTATAAGTTTTGTAGTTTCAATTGATCTTTTTGATTCCCCTTTGGTTTATTTCA GTTTGTTTTGTTTCAAACTTCAGAGTCATTGTCTACTACAAGTTTACAACAAAAGCACCAAACTTTAAGTTCACTGTTGC AAAATTAGCATTTTCTAAAAGCTAGAGTGGTCATTGAACCAGCAGAAACATTGTTCATTAGTTCGGCGTGGTTGAGTAGG TGATAATTAAATATATATGCTAATATTATATAATATGTAACATAATAAACCAACATAAAATGATAAGAAAGTTAAGTCTA GTAAAAATTTAAATTAACATTAAGTAACTTTATTATATGTCGTGTAAGGTAAGAATGTAATAGAAAGATAAATAATAACA ATCAAACCTCATACAGGGGCCGTTGTAACTTACATTAGACCTTTATTTACTTAAAAAATACTTTTGATTAAATTACAAAT TTTAACAATAAAAAATAGAAAATATGAGTGGTTCAAATAAGTTCTTATCACCAATTTTGGATCGGTTCAACCAGTTATCT TGATTTTTAGATCAACTGATTGATTCTCTGTGTTGATTGGGCTAGACACTTGATTGACTCATTCTCTTGTTTTTATTTAA AACGGTTGGCACTGTTTGATATTTAGTATCATGTAAATTAGAGATGTGTACTAGAGTCATGATTATTCATACTACTGATA CATGAGCTCTAAATTTATGCTCTGTGGTATTTTCTGCCCTTCCTGACGTGTTTGTTACTTGCATATCATTTCAGGACAGC CAAAACGACACCTTCTTACAACAGGCTGGAGTATATTTGTTAGCGCCAAGAGACTCGTAGCTGGAGATTCTGTGCTTTTC ATATGGTATTTGTTTCTATTACCTCTTTTGGCAACCTTTTCTTCCCCTTGAATGCTGTATATTAATTTTTTGTTTTTTTC CATGTTCTTACACTATAGGAATGAGAAGAATCAGCTTTTTTTGGGAATACGTCGAGCCAACCGTCCACAAACTATAATGC CATCATCAGTTCTATCCAGTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCCCATGCTGCAGCAACTAATAGCTGT TTTACCGTGTTCTTTAATCCAAGGTTGTGAATGTTTTTTAAATTTCTACTTAAGATACTTCGTTGTAAGAAATTATAATG CTTCATTTGACAGTATATCATGGGTGCAGGGCTAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATGTCAAAGCTGT GTACCATACGCGTATTTCTGTTGGTATGCGCTTCAGGATGCTTTTTGAGACAGAAGAGTCAAGTGTCCGAAGGTACAGTT GCATATATATATGTATATATATATCCTGAATTTGTTATTTTCCCTTTAGCAAATGTTATATTTTTGTTCTTGAAGCCCTA GAATCTAGATATATACCCTGCAGCTCTTGGATCAACTAATTGTAATTTTCAGAGGTAGACATAATTACAACACAGATGCT GAACTTTTGAAATAAGTCAGGATTGTAGTACTAGTAGTTAGTATTTCCCTACAATAAGGTTGATATTTGATAGAGCTCTT AGTGATGGTTGGGCCACAGCCAATGAGACCAGGCCCAAAGGATGGAAAGTATATGTGAGAAAGAATAAGAGAGGGGAATC TTAGGAGGGTGAGCTGGCACAAGTTAGTTACGGCCTTTGCGGGGAGGAAGGGTGTGTGAGGTGCGTAAGGCTGAGTGAGA TTCCCATATAAGCTTTCTGTTAGAATGAGAATGGTTATGGAGGAAAATAGGTTGTTAAGAGTAGAGTGAAGAGAGTCTCT TCTTCTACAGGAGTCTTACTCTGGGGCAATAGCAGTAGCTATTGCATTTCTGTTTCTTCTATTTCAGTATTAATCAAAGT GTTTTCTTATTCTCATACCTTGTTCTCTATTTCTGTATTCTGGTTCCCATCAATATTTCATATGCATGTATACTATGTAA AGATGCCAGTTTCTTGATAAACTAGTAAAAACCTATGCTTTGAATAGTTTTAAAAGCCATTTCAGCAACAGCTTAGAAAT GGTTATCAGTCCAAAATTTCAAAATCTACAATGTGAGAAAAGTGGACACCAACTACTAGATGTTATTTTTAGGGAGTCTG GAACTGTACTGTTCCTGTAACTTACTTTTTTATTCTTTTAATCTGAGACACTCTACATAAAAATTAGGGGATGCAATGTG AAGTTACTGGAAAACCTAGTGGAGAAGTGTTCTCATTTGTGCTATATCATACTATTTTGCATTTACTTATCCATTTATCA CCTTTATTTTGCAGGTACATGGGTACAATAACTGGCATAAGCGATCTGGATACTGTTCGGTGGCCGAATTCTCATTGGCG CTCTGTCAAGGTAAGTAAGGCCTGAATGTAATGTTTGAAAGACTACATATCAGTGAAAGATTGCATATCAGTGTATATAA TACCTTTTGTTTCTGTATATAATTTAATGCCACTTTTCAATTATATAACTTGTTCTGTGGACTGTGTCTGAAGAGGAAGG TGGAGGAACGTGGTCTTCTTAGATATCTTAACATAATAGATAAATGCACTTTTCGATGCTAATCTAATGAAAATTTGTTT GGTATTTCTTTTCCCTACTTTTGTTTTCTGAATTCTAGAATCCTTGTTTACTGTCAACAAAATTGTCTGGGAAGTATAGC TTGTTAGGAATCTGATTTATTAACTCTGTTCTTTTTTTATCTAAACCTACATAGTGTCCTTTCTATAACATCTGTAAACA TAAGCCAACCTAGGACAATTGAAGAACTGTACTATATTTTGATCTGTTCTTTTGTTTTAATAATACTTGCATGTACCCTT GTTCTACAACTTTTTGGTTCTACTTCCACTTACTATTGTTGTTATTATGATAACATTAAAAAAGAATGTTAAGTACAACA CACTATGTGATTATCCTGGACGATTGATCTGCAGCAACATTTTAGTAGTTTCACTTTCAGCCTTTCAAAGTTTAATTTTA TCAAGTGTATTAAAGAATTTATCTTACCTGTTCCTTTTATACATTGTGGAAAGGTTGGTTGGGATGAATCAACAGCAGGA GAGAGACAGCCACGAGTGTCGTTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTACCCATCATTATTTCCCCTCCG ATTGAAACGTCCATGGCATCCTGGCACCACATCTTTGCAAGGTATGCTTTTCCTGAATGCTGACTTTTTATATATAGGCC TCGGTCTAACTATCGAGGGTTGGGTGTGGTATAAGCAAGCTGTAGTCTCGGAGGTAGGACTGAAGTTATAACATCGGCAC TCCAAGAATGAAAATGAGTTCAAAATGTCCTCCCGTAAACTAAGTCTTTTAATGATACTTATGCTTTTAGGTATGACATC TTATGCAATTGAAAGCATTTGATATTTGTAGTAAGATACTATACAGTATTTTTAATAAGCAAAGCTTTTATCCAAAAGAA AAGGATTACAAGGCGCAAGAAAATGTATTTACCATTCTCTGAACAAATATTTTAAATTAGGGAACAATGTGAAGATAATA GGGGCAATTTTCAAGTTATTAGCGAAAGAGAAGTGCTTTCAAGTTTAACACAATTGATTGATTTGTTTTTTGAGAAGTCA ACACATTTTCTTAAAATTTAGGCAAATATGTTGACGTTTTCCTTATAATAAACCAATCATAGGGAGTGAGAGAGTGTTCA AAACAAATGTGTTGCTAGCACTCCTCTAAATGAAAATAGGAAAGTAATAAACCAATCACAGGGAGTGAGAGTGTTCAAAA AAATGTGTTGCTAGCACTCCTCTAAATGAAAATAGGAAAGTAAAACTAAAATCGTTTATCAAACAAAACAGGCCCTTAGG TTTTGTGCTGTTAATCCACTTTTAGGTGCTGGGAAGATTCTCAGACCCTCCTCTCCTTCTAAGCAAAGGGCCATGGTTAT TTCGAGGTTCTTCATTTGTCTCCTCTCTTTACCAAGGATTTTGTTACAGATGGCAGAGACGAAGCAACTAGCGGGCTAAT GTGGCTGAGAGGTGGACCTGTAGATCAAGGATTTAATTCCCTAAATTTTCAAGGCGCTGCTGGTATGTTGCCCTGGATGC AGCAGAGACTGGATCCAACTTTACTAGGAAATGATCAGAATCAACAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGGAC CCGGGTAGCGGATATCTCATGAGGCCACAAATGATGAATTTTCAACAACCTTTCAATTATCTTCAACAGCCTGGAAATGG TAATTCTCCTTTGCAACTTCAGCAGCAGCAGCAGCATGCAATTCAACAATCAGTGTCTTCTAATATGCTGCAGCCACAAG CTCAAGTACTCACAGAGAACCTGTCTCAGAACCTCCTTCAGAAACCACATAACAGTCAACAAGTCCAAGCACAGCAGCAG CAGCAGCAGCATACCTATCGCGATACACTTTTAATTCAAAGTGATCAGCTCAATCAGAGACAAGTGCCTTCTCCGTCGTA TTCCAAACCAGATTTCTTGGATTCGAGCTCAAAATTCAGCACTTCAGTTCCCCCAGGACAAAATTTGCTTAGTTCACTTT GTTCCGAAGGAAGTGGTGGTCTCTTAAATTTATCCAGAAGCGGTCAGTCCTTGATAACTGACCAGTTACCCCAACAATCA TGGACTCCAAAGTATCCACCCATGCAGGTCAATTCCTTCAGCAGTACGATGTCACATTCACCGTATTCTGGGAAGGATTC TGCGATGGGGCCACCACATTGTAATTCAGATACTCAAAATTCTACTCTATTTGGTGTCAATATTGATTCATCCGGTCTTC TACTCCCCACCACTGTCCCTGGTTACACCACTTCATCAGCTGATACTGATGCATCAACAATGCCATTATTAGGGGATTCT GGATTCCAGGGTTCTCTATATGCTTGCATGCAAGATTCATCAGAGTTGTTGCAAAGTGCAGGGCAAGATGACCCCCAAAA CCAGAGTCAAACATTTGTCAAGGTATGATTCTTAAGCAATATGCAGCTTTGTCAGCCCTTGTTCTATTCAATTTAGTAGT TTAATTCTGTCATTTCACAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTTGACATCTCGCGGTTCAGCAGCTATCAT GAGCTGCGCGAGGAGTTGACTCGGATGTTTGGAATTGAGGGGAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGT ATTCGTCGACAGGGAGAATGACGTTCTTCTCCTTGGAGACGATCCCTGGGAGTAAGTACCAAGTGTCTTTAACATTATGG TTTACTGATTGAACTTGTTTTGTGGTTTTTATATCCTTATTTTTTAAAGTGCTTTAGGACCTGTTTGATTACTTGTTGGT AAAATAGTTTTAGTTTTTTTGAACAGAAGAGAGAAAAACTCGTCTCGTTTGAACTGATTTTAAAAACTGTTCTTATTTTT AGTTTTTTAAACTAAAATCTCAAACCTCTCAAAGATGTTTTCTGCTTTTTGCTTTTGTTTTTAGTTTTGAAGTCACATGT CTTTCAACTTTGTAAAACATTTAATTCTTTTTCTACTTCTAAAAATAGTTTTTAAATCTAGAAAACTGAGAAACGAATAG CTAGGTATTTGTTTCACATGGGTAGTGTTTGGTGACATTCTCAATGTTGGTGTTATGTTTTCTGCATGTCCTTGTAGATC ATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAAGATATTCAGAAAATGGGAGAAGATCAAGCGTTGGAAT CCATTGCTCCGAGTTCAGGACAAAGGCTCAATGGCAGTGTTGCAGAATCTCACCTCATTGTTTCGGGCCCGCCATCGATT GGCTCCCTTGAATACTGAGATAATTTAATAATTGTATTCCTTCAGGTTCCATGGCCACCACAACTTACTGCATGTTTATT ACTTCGGTTGGGATATTCTGTGTATGATGTGTTCTACTTTCATCATCTTTATTATTTCTACCAGGACTGATGAACAAAAT ATACATTTAT
CDS sequence (LotjaGi6g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCA TGCATGCGCGGGGCCCCTGGTGTCCCTACCAACTGCGGGGACTCGTGTGGTTTACTTCCCCCAGGGTCATAGTGAGCAGG TTTCTGCCACTACTAAAAGAGAAGTTGATGGGCACATGCCCAATTACCCAAGCTTACCACCTCAATTGATCTGCCAACTT CACAATGTCACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACACTGCAGCCGTTGACTCCGGAAGA GCAAAAGGATACATTTCTTCCTATGGAATTGGGCCTTCCAAGTAAGCAGCCTTCGAATTATTTTTGCAAGACTTTAACCG CCAGTGACACCAGTACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCTCTGGATTTCTCC CAGCAACCACCTGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAATGGAAGTTTAGACATATTTTTCGGGGACA GCCAAAACGACACCTTCTTACAACAGGCTGGAGTATATTTGTTAGCGCCAAGAGACTCGTAGCTGGAGATTCTGTGCTTT TCATATGGAATGAGAAGAATCAGCTTTTTTTGGGAATACGTCGAGCCAACCGTCCACAAACTATAATGCCATCATCAGTT CTATCCAGTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCCCATGCTGCAGCAACTAATAGCTGTTTTACCGTGTT CTTTAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATGTCAAAGCTGTGTACCATACGCGTATTT CTGTTGGTATGCGCTTCAGGATGCTTTTTGAGACAGAAGAGTCAAGTGTCCGAAGGTACATGGGTACAATAACTGGCATA AGCGATCTGGATACTGTTCGGTGGCCGAATTCTCATTGGCGCTCTGTCAAGGTTGGTTGGGATGAATCAACAGCAGGAGA GAGACAGCCACGAGTGTCGTTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTACCCATCATTATTTCCCCTCCGAT TGAAACGTCCATGGCATCCTGGCACCACATCTTTGCAAGATGGCAGAGACGAAGCAACTAGCGGGCTAATGTGGCTGAGA GGTGGACCTGTAGATCAAGGATTTAATTCCCTAAATTTTCAAGGCGCTGCTGGTATGTTGCCCTGGATGCAGCAGAGACT GGATCCAACTTTACTAGGAAATGATCAGAATCAACAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGGACCCGGGTAGCG GATATCTCATGAGGCCACAAATGATGAATTTTCAACAACCTTTCAATTATCTTCAACAGCCTGGAAATGGTAATTCTCCT TTGCAACTTCAGCAGCAGCAGCAGCATGCAATTCAACAATCAGTGTCTTCTAATATGCTGCAGCCACAAGCTCAAGTACT CACAGAGAACCTGTCTCAGAACCTCCTTCAGAAACCACATAACAGTCAACAAGTCCAAGCACAGCAGCAGCAGCAGCAGC ATACCTATCGCGATACACTTTTAATTCAAAGTGATCAGCTCAATCAGAGACAAGTGCCTTCTCCGTCGTATTCCAAACCA GATTTCTTGGATTCGAGCTCAAAATTCAGCACTTCAGTTCCCCCAGGACAAAATTTGCTTAGTTCACTTTGTTCCGAAGG AAGTGGTGGTCTCTTAAATTTATCCAGAAGCGGTCAGTCCTTGATAACTGACCAGTTACCCCAACAATCATGGACTCCAA AGTATCCACCCATGCAGGTCAATTCCTTCAGCAGTACGATGTCACATTCACCGTATTCTGGGAAGGATTCTGCGATGGGG CCACCACATTGTAATTCAGATACTCAAAATTCTACTCTATTTGGTGTCAATATTGATTCATCCGGTCTTCTACTCCCCAC CACTGTCCCTGGTTACACCACTTCATCAGCTGATACTGATGCATCAACAATGCCATTATTAGGGGATTCTGGATTCCAGG GTTCTCTATATGCTTGCATGCAAGATTCATCAGAGTTGTTGCAAAGTGCAGGGCAAGATGACCCCCAAAACCAGAGTCAA ACATTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTTGACATCTCGCGGTTCAGCAGCTATCATGAGCTGCG CGAGGAGTTGACTCGGATGTTTGGAATTGAGGGGAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCG ACAGGGAGAATGACGTTCTTCTCCTTGGAGACGATCCCTGGGAATCATTTGTCAACAATGTTTGGTATATCAAAATACTT TCACCTGAAGATATTCAGAAAATGGGAGAAGATCAAGCGTTGGAATCCATTGCTCCGAGTTCAGGACAAAGGCTCAATGG CAGTGTTGCAGAATCTCACCTCATTGTTTCGGGCCCGCCATCGATTGGCTCCCTTGAATACTGA
Protein sequence (LotjaGi6g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSTSGLGQQGQEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTKREVDGHMPNYPSLPPQLICQL HNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFS QQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSV LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI SDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGLMWLR GGPVDQGFNSLNFQGAAGMLPWMQQRLDPTLLGNDQNQQYQAMLAAGLQDPGSGYLMRPQMMNFQQPFNYLQQPGNGNSP LQLQQQQQHAIQQSVSSNMLQPQAQVLTENLSQNLLQKPHNSQQVQAQQQQQQHTYRDTLLIQSDQLNQRQVPSPSYSKP DFLDSSSKFSTSVPPGQNLLSSLCSEGSGGLLNLSRSGQSLITDQLPQQSWTPKYPPMQVNSFSSTMSHSPYSGKDSAMG PPHCNSDTQNSTLFGVNIDSSGLLLPTTVPGYTTSSADTDASTMPLLGDSGFQGSLYACMQDSSELLQSAGQDDPQNQSQ TFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKIL SPEDIQKMGEDQALESIAPSSGQRLNGSVAESHLIVSGPPSIGSLEY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 834 | 834 | 0.0 | – | |
| PANTHER | 1 | 834 | 834 | 0.0 | – | |
| SUPERFAMILY | 112 | 257 | 146 | 5.49E-49 | ||
| Gene3D | 126 | 230 | 105 | 6.7E-42 | ||
| CDD | 127 | 223 | 97 | 4.04223E-22 | ||
| ProSiteProfiles | 128 | 230 | 103 | 12.294 | ||
| SMART | 128 | 230 | 103 | 7.6E-24 | ||
| Pfam | 128 | 229 | 102 | 1.9E-21 | ||
| Pfam | 254 | 337 | 84 | 1.5E-33 | ||
| Gene3D | 292 | 365 | 74 | 4.2E-33 | – | |
| MobiDBLite | 472 | 496 | 25 | - | – | |
| MobiDBLite | 548 | 571 | 24 | - | – | |
| Pfam | 712 | 804 | 93 | 5.7E-8 | ||
| Gene3D | 716 | 809 | 94 | 1.6E-35 | – | |
| SUPERFAMILY | 718 | 794 | 77 | 4.9E-7 | – | |
| ProSiteProfiles | 720 | 804 | 85 | 23.355 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Response to hormone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. |
Expression pattern of LotjaGi6g1v0048400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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