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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0056200 |
| Transcript ID | LotjaGi6g1v0056200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT1G66250.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2; TrEMBL-Plants: tr|A0A1J7IGU2|A0A1J7IGU2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0056200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:10230594..10234209) extracted from Lotus japonicus Gifu genome v1.2.
TTAGTAGTTTGTCTTTACCTTATTCATTTGTCCTTGTCTTGGTTTAACCCTTGCCTCTGCTTTTTGTCCAGTTGCAGTGA AAATCCTAGTCATGGATGATTCCTCAGCTCTTTGATCTTTCTCAAAGCCTTACAACGTATAACGCTTGAATCTTTCACCC TCTATTTCCCTAAAACTCATAGTCTTCCTCTCCTGCATATTTTCCTCTTACAGTGTTACCCCACTTTGCTCTTTCCATTT TCTTGAACTTGGTTTCTCTCACAAACACATTCATTCTTTGACACAAGATTTCACAGGGGTTTCTAAACTATGACTATGGT TGTGCATTTTCTTCTGTTGCTTTTTGCAGTTTCTGCTGTTGCTGCTGATGAAGGTGAGTAGCAGTTAATTTTAGTTACCT AAATAATCTTCTTTGCTGTTATACTTGCTCTGTTCATGAGTTCTCTGTCAAAGGAAAACAGGGTTTTTCACTTTTTAAGT TGCATGCATTTTGAATCTTCATTTCCCTTTAGTATAAACATGAGTTGGCATTTTCATTTGCAGTTTGAATTGAAAAACTA CATTTACTTCAACAGAGTGTGTGCATTACTCTTTAGTCTTTACTTTCTTCCTCACCCTTAAGAAAAGGGTTTAGGATGAC CCCTTTCTTTAAATGATCTATGAGATTTAGGGCCAGGTTTACTTTGGTGAAAGTGAAATTTTACAATGTACTAAGGCATT ATCCCCAGAACACACTTTCTTAGTGCTATGAGATTTATCTAGTGCTGGTATTCAAAGAATTAAGGTTTGAAAGGCATGAC ATGGTGTGGAGTGATGAATCAATCTATTATTCGAGTTTTCCCATTTTCACCCTTTCTTTAAAAAAAATGCATTTATTTTC TTGCATACTGCTTATTTTGACTGAAAGATGTTGATGAACAACTAATGTAGTATGGAAAATAATATGTAAGAAAAGAAGAA TGGGTTAGGTAGATTTTTATTGAATGGTCTTCTTGAATGACAATGTTTTAAACCTGTAGTATTCAGAAATATTAAATGTG GTAGTACCCCTCTGTCTGTCCTTCTATTAAACCATTTAATGTCATTTTCCCCCACAATTGACTATGTGTGTAGCACTTTT TCATGTTCAAGTTGTTTTCAAAAAAGCTTACCTTTTCAGGAAATTATCTATCTACTTCCTAATATTTGGTTGGTCTCACT ATTTAAATCTTCAAAAGAAAGCAAATCAACCTTCCAACAATTTTTCAAATACTCACATTTCACACAAGTAACTCAACACA AAAAATCTGGATTTAATTGAAAGTGGCAAAATGTGCAAAAGGCAAACCTTGTGTTATTTGACTAGTGAATTGTATGTTTG GAAATTCTTCTATGATTGATTCTAAAGCAAAAATCAATTTTTGAGACAAGCTTTTGTGAGCAGCGTCTGGTTGCTAGAGT TGATTATGAGAAAAAAAAAAGTTGATTCAAACATGCTATAATTGGTAATGGTTTTAACCTGAGCTAATGCTTAATGGGTT TTAATGTTTGTTCCTTACAGAACCATTTATTGGAGTGAATATTGGAACAGATCTCTCAGACATGCCTCACCCCACTCAAG TAGTAGCACTGCTTAAATCCCAAAAACTTCAACATGTCAGATTGTATAATGCTGACCAAGCTATGCTCGTTGCACTTGCA AACACTGGAATTCAAGTTGTTGTGTCTGTCCCCAATCAAGAGCTCCTATCAATTGGTCAATCAAATTCCACAGCAGCAAA ATGGGTTTCTACCAATGTGGTAGCACATTATCCAGCTACTAATATCACAGCAATTTGTGTTGGTTCTGAGGTTTTAACCA CCCTCCCTAATGCAGCAAAACTACTAGTCAACGCTCTTAAGTACATTCATTCAGCCCTTGTTGCGTCGAATCTCGATCGC CAGATTAAAGTTTCAACACCCCTTTCCTCTACCCTCATCCTTGATTCATTTCCACCTTCCCAAGCCTTCTTTAACCGCTC GCTGAATCCAGTCTTGGTCCCAATGCTCGATTTCTTGCAATCCACCGGCTCTTATCTCATGCTTAACATCTACCCTTATG ACGACTACATGCTGTCGAATGGTGTGATTTCATTGGACTATGCACTCTTCAAGCCTCTTCCTCCCAACAAGGAAGCTATT GATTCTAACACCCTTCTCCACTACTCCAATGTGTTTGATGCTCTGGTTGATGCAGCATACTTTGCCATGTCTTATCTCAA CTACACTAACATTCCTGTGGTGGTGACTGAGACAGGTTGGCCCTCAAAGGGTGACTCTAATGAGCCGGATGCAACGCTCG ACAATGCCAATGCTTACAACAGCAACTTGATCAAGCATGTGCTGAATGTAACCGGAACTCCAAAGCGCCCTGGAATTGCT GTTAGTACTTACATCTATGAGCTCTACAATGAGGATACAAAGGACGGGCCATTGTCAGAGAAAAACTGGGGATTGTTTGA TGCTGATGGGAAACCTATTTACATTTTACACTTGACAGGATCAGGAGCAGTGTTGGCGAATGACACTACCAACCAAACTT ACTGCGTTGCGAAGGACGGTGCTGATCCGAAGATGCTGCAGGCTGGGATAGACTGGGCATGTGGACCTGGCAAGGTGGAT TGCTCTCCATTGTTGCAAGGAGAGGCATGCTATGAACCAGACAATGTGAATGCACATGCAAATTATGCTTTTGACACTTA CTATCATCAGATGGGAAAGTCTCCTGAGTCATGTAATTTCAATCAAATGGCTACAATCACCACCTCAAATCCAAGTAATT TACCATTTTCCTTTGAGATTGTAAATATTTGGCTGCATTGTTGTGATTTTTGTGGTTCTATTGGCGATTTCTAGTATGAC TTATGATATTCTAAATGATTGTTGCAGGTCATGGTTCCTGTATATTTCCAGGAAGGTAATGTATTTGTCCTGAGATATTT GTGACATACTACTAAGATAATGGTGTGATATTGGTGCAGCTATGATCTTATTGAGATATTATATATCAGATATGCTGTAA TCTCATAATACCAGGATCAACCGATCAACATCTTAGTAATATGTCACAAATATCTCATCAATATCTCATTAATTTGCCTA TTTGTTTCATTTTGTTAACGATGTTTGTTTGTGCCAATATTTTTGCTTACAAGTGATTGGTTTGTGAATATGTGCAGTCT TGGGCAAAATGGCACCTTTGCCAATGTCACTGCACCATCACTGAATTCCACAAGTTCATCTTCTTCGGCATGCAATCTCC ACAAATGTGATTTGAGAATTAAAAGCCTTCTGATGGTGATAGGATTTCAAATATTGGGAGTGGTTGTGCTATAAACTGTG TATCTCAGAACTTGCGTTGACTCATTCAAAACACTTGAGGTAGATGATGATTGATGATGTTACATAGTAGGCTTTGTTGC ATGTTCAAAGTGGCCTACTCAATTTTGTAAAAAGGCCAGTTAATGGTCTGGACTGAATTAGGCTTCAAATGAAACACTAT TATCATTATTATTCTTTTCAATTAGAATTCATTCGCTCCTTATCAAGAAGTGACAAATAGCATGTTTGGATTAACTTCTG TTTTCTTGGAATCAAT
CDS sequence (LotjaGi6g1v0056200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTATGGTTGTGCATTTTCTTCTGTTGCTTTTTGCAGTTTCTGCTGTTGCTGCTGATGAAGAACCATTTATTGGAGT GAATATTGGAACAGATCTCTCAGACATGCCTCACCCCACTCAAGTAGTAGCACTGCTTAAATCCCAAAAACTTCAACATG TCAGATTGTATAATGCTGACCAAGCTATGCTCGTTGCACTTGCAAACACTGGAATTCAAGTTGTTGTGTCTGTCCCCAAT CAAGAGCTCCTATCAATTGGTCAATCAAATTCCACAGCAGCAAAATGGGTTTCTACCAATGTGGTAGCACATTATCCAGC TACTAATATCACAGCAATTTGTGTTGGTTCTGAGGTTTTAACCACCCTCCCTAATGCAGCAAAACTACTAGTCAACGCTC TTAAGTACATTCATTCAGCCCTTGTTGCGTCGAATCTCGATCGCCAGATTAAAGTTTCAACACCCCTTTCCTCTACCCTC ATCCTTGATTCATTTCCACCTTCCCAAGCCTTCTTTAACCGCTCGCTGAATCCAGTCTTGGTCCCAATGCTCGATTTCTT GCAATCCACCGGCTCTTATCTCATGCTTAACATCTACCCTTATGACGACTACATGCTGTCGAATGGTGTGATTTCATTGG ACTATGCACTCTTCAAGCCTCTTCCTCCCAACAAGGAAGCTATTGATTCTAACACCCTTCTCCACTACTCCAATGTGTTT GATGCTCTGGTTGATGCAGCATACTTTGCCATGTCTTATCTCAACTACACTAACATTCCTGTGGTGGTGACTGAGACAGG TTGGCCCTCAAAGGGTGACTCTAATGAGCCGGATGCAACGCTCGACAATGCCAATGCTTACAACAGCAACTTGATCAAGC ATGTGCTGAATGTAACCGGAACTCCAAAGCGCCCTGGAATTGCTGTTAGTACTTACATCTATGAGCTCTACAATGAGGAT ACAAAGGACGGGCCATTGTCAGAGAAAAACTGGGGATTGTTTGATGCTGATGGGAAACCTATTTACATTTTACACTTGAC AGGATCAGGAGCAGTGTTGGCGAATGACACTACCAACCAAACTTACTGCGTTGCGAAGGACGGTGCTGATCCGAAGATGC TGCAGGCTGGGATAGACTGGGCATGTGGACCTGGCAAGGTGGATTGCTCTCCATTGTTGCAAGGAGAGGCATGCTATGAA CCAGACAATGTGAATGCACATGCAAATTATGCTTTTGACACTTACTATCATCAGATGGGAAAGTCTCCTGAGTCATGTAA TTTCAATCAAATGGCTACAATCACCACCTCAAATCCAAGTCATGGTTCCTGTATATTTCCAGGAAGTCTTGGGCAAAATG GCACCTTTGCCAATGTCACTGCACCATCACTGAATTCCACAAGTTCATCTTCTTCGGCATGCAATCTCCACAAATGTGAT TTGAGAATTAAAAGCCTTCTGATGGTGATAGGATTTCAAATATTGGGAGTGGTTGTGCTATAA
Protein sequence (LotjaGi6g1v0056200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTMVVHFLLLLFAVSAVAADEEPFIGVNIGTDLSDMPHPTQVVALLKSQKLQHVRLYNADQAMLVALANTGIQVVVSVPN QELLSIGQSNSTAAKWVSTNVVAHYPATNITAICVGSEVLTTLPNAAKLLVNALKYIHSALVASNLDRQIKVSTPLSSTL ILDSFPPSQAFFNRSLNPVLVPMLDFLQSTGSYLMLNIYPYDDYMLSNGVISLDYALFKPLPPNKEAIDSNTLLHYSNVF DALVDAAYFAMSYLNYTNIPVVVTETGWPSKGDSNEPDATLDNANAYNSNLIKHVLNVTGTPKRPGIAVSTYIYELYNED TKDGPLSEKNWGLFDADGKPIYILHLTGSGAVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGEACYE PDNVNAHANYAFDTYYHQMGKSPESCNFNQMATITTSNPSHGSCIFPGSLGQNGTFANVTAPSLNSTSSSSSACNLHKCD LRIKSLLMVIGFQILGVVVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 8 | 459 | 452 | 3.4E-259 | – | |
| PANTHER | 8 | 459 | 452 | 3.4E-259 | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 500 | 481 | - | – | |
| Gene3D | 25 | 346 | 322 | 4.2E-117 | – | |
| Pfam | 25 | 344 | 320 | 7.3E-82 | ||
| SUPERFAMILY | 25 | 344 | 320 | 1.29E-86 | ||
| ProSitePatterns | 259 | 272 | 14 | - | ||
| SMART | 361 | 446 | 86 | 6.4E-46 | ||
| Pfam | 362 | 433 | 72 | 1.3E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0056200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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