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LotjaGi6g1v0059500.1

Overview

Field Value
Gene ID LotjaGi6g1v0059500
Transcript ID LotjaGi6g1v0059500.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G37790.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13; TrEMBL-Plants: tr|A0A151U9F3|A0A151U9F3_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi6g1v0059500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:10864316..10868286) extracted from Lotus japonicus Gifu genome v1.2.

CTGTCCCCTTCACCAATTAAAAACATCAAAGATTCTCTTCATGCCTCCTAACCCAACCCAACCCAACCCAACCCATCCCT ACATTTTCAGTTCCCACCTTCTCCCACTCTGATCTGAAAACCAAAGCATGCACCATTCACCATTACTTTAAATATCCAAA TTTCTTCAATTATTATTTATACACTCCTTCCCTTCCCATCTCTCTTCCTTTCCAAAAACAATTCTCTCCCACCCCACAAG CAAAACCTCCTTTAGCTTTTTCACTTTTTCCATGTTTTTCTTCTCTCTCTCTCTCTGTGACTCTGTGTGAGAGTGTGTGT GTGTTTTACTCTACCCTTTTTCAATTTCTAGATTTCTGTGCAATTTGCAAATGGGTTTCTCCCAAGAAACTTGCACTGAT TCCAGAGAATTTTCAAATGCTCAAAACACTCCACCACACTCTTCTTCTTCATCTTCTATAGCATTTGTACCCATTACAGG TCATCACTCCAGTGACCTCAAGAAGCTCAAATTTCGAAACTTTTTGAGAAAAATGATCTGGGATTTCAGTTTCGCCTGCG TTTCCCACCCCTCCCGCCGCCGGGGAAGCTCCGACAGGAACCTTATTCACCACGAAAACGACGGCGGCGACGGCGACAAG AAGAAGATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGGTGGCTGCGGTGGAGTGGAATTGCCCAATGC TGACCCTCAATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGGTGGAGTTGGAGTCCCTGAACATGAGTTCTT CCAATGCTGCAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTCGTGCTAGGGAGATGAAATGGAGGAGA ATTGAGTCGTTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAGGTTCAGCTATGGTGAAATTGTTTCTGCTAC TAGGAATTTTTCTAAAGGTAATTTCTTTTTGTTTTTGTTTTGTTTCGGTTTTTGTGGTGTTATGTTGTTGTTGTTGTTGT TGTTTAATCATAGGTGGTTCCTTTTGTTATGGTTTGTGTAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTA GGGGAAGAGTTGGGATTTTGAGAACTGCTGTGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAGGCTTTT TGTAGAGAATTGATGATTGCTAGCTCACTTCATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCCTGAGGA GGGTTTGTTTTTGGTTTACAAGTATGTTTCAGGGGGGAGCTTGGAGCGTCACTTGCATGGTATGTGGGTTTTCAAAATTT CTGTGGATCATGTTATGTGAGGTTTTGAATTTGAAATTGATGGATTTAACTGATTCTAACATGGCTGTTTCACAGGGAGG AGGAAGGGTAGTTCACCACTTCCGTGGTCTGTGAGGTACAAGGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCA TAGTGGAACTGAGAGATGTGTTGTTCACAGGGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGG TGAGACGTTTTCCTGTGAATTAATTGTATACTTGTGTTTATAGCATGTTTGGATCAACTTCTCTTTCCTCAGAATCAATT CTGGTACCTAGAAACTACTCTCAGAAGCTTCTCCCCATAGTTGATTCTGACTTTAGAATCAATTGTAGAGGATTCTCAAA CATGCACTTAGTACTGTGGAGATTGTCTGATACAATGATACAAGTCAATCTGATTGTTTTTGTAATCTTGTAGCTATGTG ATTTCGGATTAGCTACATGGACTTCAGCACCTTCGGTTCCTTTCCTATGCAAAACTGTCAAAGGAACTTTTGGGTATAAA CTTAAGCCCTTCATGTTGATTCCTCAAAGTTTTGGTTTGTTTCTGTTATTTATTTCATTTCATATTTTGTAATTACTGAA ATCTAAACTTTCTATAACTTTGCTTTCCTAATAGATATTTGGCTCCTGAATATTTCCAACATGGGAAAGTATCGGATAAG ACAGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTAATTACTGGCCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGG AGAGGAGAACTTGGTGTTATGGGTGAGTTAATGCTTTAATTCTTGCAAAGTTATCGTAATTCCTGATTATAAGATGGTAG ATTTCATTCCTTCTGTGGTTTGTGGTTGAGAATAAACAGAGCATTGTTAGTATAAATCACAATATACTCCTTTCTGATAG TGCATTAAAGCTATGGTGTCAATTTCACCTTAGTTTGTTGCTTCTAGATCACAAAACAATGTGATAGCCTAACTGATTAC TCCTATTAAAAATTGAAAGGAAATCGAAAGTTGTTCATTTTATCTAGTTCTAAGATCAGACCTAACTTAGAAAAAAAATC AGACTTAATATAGGTTAAAACCGTGAAAAATGTTATCTTTCTAATGTGTTTTAATATTTCTAATATGTCTTAGTGTATTA TATTGGTCTCTTAAATAGTAAAATCTTATAAAATTCAGTCAGAATAATGAAGGCTGTGGGCGATCTTGAATCACTCGCTT TACTAAGATCGAACTGTGTTTAGCAAGAGTGTATGTGCTGCATATTTTGAAATGCATCAAGAGCTTACTTTTTGAGTGGA TAAATGATATTAATGCAGAGTTTAATTATGTGCATTGCAATTTTAACATAGTGAATGAATCGTGTCTATCCTTTATAGTA TTCAACTCAGACCAATTGTTTGGCCTTTATGACAACATTAATGCTGGTAATTTCAGCACTGCGTGAAGTTTAAGTATAGT AATTTCAGCACTGCATGAAGTTTAAGCATAATAATTTCAAATTGGTGTGGTCTTGTTGACACGTCTAATCCGATATTCAT TTGCAGGCTAAACCTTTTCTGCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTAAAGTGCAGTTTGAG ATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCCAGGAGACCCGGCATAC ATGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGTTTTCTCGCGAATGGC TGCGTGATTGATTGTTATTCACAATTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGT TTCTGAGTTTGAGGATGACGATTATCTCTATGATCGTTAAAACATTGTGAGAACCCTGAAATGACTTTTTTATTTTTTGA CATGATTCTCACTAGAGTGCTAAAGATTAGATGCGAGGGATTTGAAATTGTAAATAGAAATAGAAGCTCAGGTGAAGATT ATTTGTGTGTAGATATCTTCCCTTTACCATTCCCTTTCTCAAAGGGTAAAGTGTTATAGATTTTCATTCTTTGTTTGTGG TTCATGTTCAATTCATGTTGGAGAATTATACCTTACGATTTTTATCTGATCCTTCTCAAAGCATGCATGTTTTAGGTGGG ATGGGGTTGTAGCTTTCATTTCAATGAAGAGCATTTATACATGGTGGTGGAGTGGCTATTCGGATGATAGCTTAATTGAT TTAGAGTGCTTTCTCATATTGAGAAGACCTCTCATCTACTTGATGAATGTTTGGAAACTCGGATCAAATTCCTAGTGAAA CCAAAATCATGGTCGATAGAAGCTAAAGGTAAAGGAAGTTGCTTTTGTCCACCATGATTTTGTCTTCACTTAGTTTTCAA ACGATTTCCAAACATGCACTCTCCAAGATTTCCTAAATCCAGAAAGTAGCATAAGATTAAAAAGAAACACAGAAAAATGG TGAGAATAGGTGAAAATTAAGGTAATATATTAAGCAAGGTTTGTCTTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0059500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTTCTCCCAAGAAACTTGCACTGATTCCAGAGAATTTTCAAATGCTCAAAACACTCCACCACACTCTTCTTCTTC ATCTTCTATAGCATTTGTACCCATTACAGGTCATCACTCCAGTGACCTCAAGAAGCTCAAATTTCGAAACTTTTTGAGAA AAATGATCTGGGATTTCAGTTTCGCCTGCGTTTCCCACCCCTCCCGCCGCCGGGGAAGCTCCGACAGGAACCTTATTCAC CACGAAAACGACGGCGGCGACGGCGACAAGAAGAAGATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGG TGGCTGCGGTGGAGTGGAATTGCCCAATGCTGACCCTCAATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGG TGGAGTTGGAGTCCCTGAACATGAGTTCTTCCAATGCTGCAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAA TCTCGTGCTAGGGAGATGAAATGGAGGAGAATTGAGTCGTTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAG GTTCAGCTATGGTGAAATTGTTTCTGCTACTAGGAATTTTTCTAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTG TTTTTAGGGGAAGAGTTGGGATTTTGAGAACTGCTGTGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAG GCTTTTTGTAGAGAATTGATGATTGCTAGCTCACTTCATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCC TGAGGAGGGTTTGTTTTTGGTTTACAAGTATGTTTCAGGGGGGAGCTTGGAGCGTCACTTGCATGGGAGGAGGAAGGGTA GTTCACCACTTCCGTGGTCTGTGAGGTACAAGGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAGTGGAACT GAGAGATGTGTTGTTCACAGGGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGCTATGTGATTT CGGATTAGCTACATGGACTTCAGCACCTTCGGTTCCTTTCCTATGCAAAACTGTCAAAGGAACTTTTGGATATTTGGCTC CTGAATATTTCCAACATGGGAAAGTATCGGATAAGACAGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTAATTACT GGCCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGGAGAGGAGAACTTGGTGTTATGGGCTAAACCTTTTCTGCAGAAGGG GAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTAAAGTGCAGTTTGAGATTCTCAAATCAAATGGGTAGAATGATTG AAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCCAGGAGACCCGGCATACATGAGATTATTGCAATACTGAAAGGTGAA GAAGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGTTTTCTCGCGAATGGCTGCGTGATTGATTGTTATTCACAATTACA ACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTTCTGAGTTTGAGGATGACGATTATCTCT ATGATCGTTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0059500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGFSQETCTDSREFSNAQNTPPHSSSSSSIAFVPITGHHSSDLKKLKFRNFLRKMIWDFSFACVSHPSRRRGSSDRNLIH HENDGGDGDKKKMSLEHNKAWLLAESGGCGGVELPNADPQSVHSSFRFSFCSQVELESLNMSSSNAATVLMVNLDNGVSE SRAREMKWRRIESLEKSISPVAHSLIRFSYGEIVSATRNFSKGRVLGRGALSCVFRGRVGILRTAVAIKQLDKEDKESAK AFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRRKGSSPLPWSVRYKVAIGIAEAVAYLHSGT ERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELIT GRKPIEARRSAGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLRFSNQMGRMIEAAAACVTNEESRRPGIHEIIAILKGE EEPIFCKRKKSSFLANGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYDR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 29 29 - –
PANTHER
PTHR27001:SF707
36 495 460 4.1E-185 –
PANTHER
PTHR27001
36 495 460 4.1E-185 –
MobiDBLite
mobidb-lite
66 91 26 - –
MobiDBLite
mobidb-lite
69 91 23 - –
Gene3D
G3DSA:3.30.200.20
172 277 106 7.9E-21 –
SUPERFAMILY
SSF56112
187 484 298 3.78E-73
IPR011009
ProSiteProfiles
PS50011
200 485 286 36.98
IPR000719
SMART
SM00220
200 485 286 9.8E-38
IPR000719
Pfam
PF00069
201 474 274 1.6E-45
IPR000719
Gene3D
G3DSA:1.10.510.10
278 493 216 8.0E-56 –
ProSitePatterns
PS00108
324 336 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0059500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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