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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0059500 |
| Transcript ID | LotjaGi6g1v0059500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G37790.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13; TrEMBL-Plants: tr|A0A151U9F3|A0A151U9F3_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi6g1v0059500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:10864692..10867877) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCAAATGCTCAAAACACTCCACCACACTCTTCTTCTTCATCTTCTATAGCATTTGTACCCATTACAGGTCATCACTC CAGTGACCTCAAGAAGCTCAAATTTCGAAACTTTTTGAGAAAAATGATCTGGGATTTCAGTTTCGCCTGCGTTTCCCACC CCTCCCGCCGCCGGGGAAGCTCCGACAGGAACCTTATTCACCACGAAAACGACGGCGGCGACGGCGACAAGAAGAAGATG AGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGGTGGCTGCGGTGGAGTGGAATTGCCCAATGCTGACCCTCA ATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGGTGGAGTTGGAGTCCCTGAACATGAGTTCTTCCAATGCTG CAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTCGTGCTAGGGAGATGAAATGGAGGAGAATTGAGTCG TTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAGGTTCAGCTATGGTGAAATTGTTTCTGCTACTAGGAATTT TTCTAAAGGTAATTTCTTTTTGTTTTTGTTTTGTTTCGGTTTTTGTGGTGTTATGTTGTTGTTGTTGTTGTTGTTTAATC ATAGGTGGTTCCTTTTGTTATGGTTTGTGTAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAG TTGGGATTTTGAGAACTGCTGTGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAGGCTTTTTGTAGAGAA TTGATGATTGCTAGCTCACTTCATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCCTGAGGAGGGTTTGTT TTTGGTTTACAAGTATGTTTCAGGGGGGAGCTTGGAGCGTCACTTGCATGGTATGTGGGTTTTCAAAATTTCTGTGGATC ATGTTATGTGAGGTTTTGAATTTGAAATTGATGGATTTAACTGATTCTAACATGGCTGTTTCACAGGGAGGAGGAAGGGT AGTTCACCACTTCCGTGGTCTGTGAGGTACAAGGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAGTGGAAC TGAGAGATGTGTTGTTCACAGGGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGGTGAGACGTT TTCCTGTGAATTAATTGTATACTTGTGTTTATAGCATGTTTGGATCAACTTCTCTTTCCTCAGAATCAATTCTGGTACCT AGAAACTACTCTCAGAAGCTTCTCCCCATAGTTGATTCTGACTTTAGAATCAATTGTAGAGGATTCTCAAACATGCACTT AGTACTGTGGAGATTGTCTGATACAATGATACAAGTCAATCTGATTGTTTTTGTAATCTTGTAGCTATGTGATTTCGGAT TAGCTACATGGACTTCAGCACCTTCGGTTCCTTTCCTATGCAAAACTGTCAAAGGAACTTTTGGGTATAAACTTAAGCCC TTCATGTTGATTCCTCAAAGTTTTGGTTTGTTTCTGTTATTTATTTCATTTCATATTTTGTAATTACTGAAATCTAAACT TTCTATAACTTTGCTTTCCTAATAGATATTTGGCTCCTGAATATTTCCAACATGGGAAAGTATCGGATAAGACAGATGTT TATGCTTTTGGAGTGGTTTTATTGGAACTAATTACTGGCCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGGAGAGGAGAA CTTGGTGTTATGGGTGAGTTAATGCTTTAATTCTTGCAAAGTTATCGTAATTCCTGATTATAAGATGGTAGATTTCATTC CTTCTGTGGTTTGTGGTTGAGAATAAACAGAGCATTGTTAGTATAAATCACAATATACTCCTTTCTGATAGTGCATTAAA GCTATGGTGTCAATTTCACCTTAGTTTGTTGCTTCTAGATCACAAAACAATGTGATAGCCTAACTGATTACTCCTATTAA AAATTGAAAGGAAATCGAAAGTTGTTCATTTTATCTAGTTCTAAGATCAGACCTAACTTAGAAAAAAAATCAGACTTAAT ATAGGTTAAAACCGTGAAAAATGTTATCTTTCTAATGTGTTTTAATATTTCTAATATGTCTTAGTGTATTATATTGGTCT CTTAAATAGTAAAATCTTATAAAATTCAGTCAGAATAATGAAGGCTGTGGGCGATCTTGAATCACTCGCTTTACTAAGAT CGAACTGTGTTTAGCAAGAGTGTATGTGCTGCATATTTTGAAATGCATCAAGAGCTTACTTTTTGAGTGGATAAATGATA TTAATGCAGAGTTTAATTATGTGCATTGCAATTTTAACATAGTGAATGAATCGTGTCTATCCTTTATAGTATTCAACTCA GACCAATTGTTTGGCCTTTATGACAACATTAATGCTGGTAATTTCAGCACTGCGTGAAGTTTAAGTATAGTAATTTCAGC ACTGCATGAAGTTTAAGCATAATAATTTCAAATTGGTGTGGTCTTGTTGACACGTCTAATCCGATATTCATTTGCAGGCT AAACCTTTTCTGCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTAAAGTGCAGTTTGAGATTCTCAAA TCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCCAGGAGACCCGGCATACATGAGATTA TTGCAATACTGAAAGGTGAAGAAGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGTTTTCTCGCGAATGGCTGCGTGATT GATTGTTATTCACAATTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTTCTGAGTT TGAGGATGACGATTATCTCTATGATCGTTAAAACATTGTGAGAACCCTGAAATGACTTTTTTATTTTTTGACATGATTCT CACTAGAGTGCTAAAGATTAGATGCGAGGGATTTGAAATTGTAAATAGAAATAGAAGCTCAGGTGAAGATTATTTGTGTG TAGATATCTTCCCTTTACCATTCCCTTTCTCAAAGGGTAAAGTGTTATAGATTTTCATTCTTTGTTTGTGGTTCATGTTC AATTCATGTTGGAGAATTATACCTTACGATTTTTATCTGATCCTTCTCAAAGCATGCATGTTTTAG
CDS sequence (LotjaGi6g1v0059500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCTGGGATTTCAGTTTCGCCTGCGTTTCCCACCCCTCCCGCCGCCGGGGAAGCTCCGACAGGAACCTTATTCACCA CGAAAACGACGGCGGCGACGGCGACAAGAAGAAGATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGGTG GCTGCGGTGGAGTGGAATTGCCCAATGCTGACCCTCAATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGGTG GAGTTGGAGTCCCTGAACATGAGTTCTTCCAATGCTGCAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATC TCGTGCTAGGGAGATGAAATGGAGGAGAATTGAGTCGTTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAGGT TCAGCTATGGTGAAATTGTTTCTGCTACTAGGAATTTTTCTAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTT TTTAGGGGAAGAGTTGGGATTTTGAGAACTGCTGTGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAGGC TTTTTGTAGAGAATTGATGATTGCTAGCTCACTTCATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCCTG AGGAGGGTTTGTTTTTGGTTTACAAGTATGTTTCAGGGGGGAGCTTGGAGCGTCACTTGCATGGGAGGAGGAAGGGTAGT TCACCACTTCCGTGGTCTGTGAGGTACAAGGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAGTGGAACTGA GAGATGTGTTGTTCACAGGGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGCTATGTGATTTCG GATTAGCTACATGGACTTCAGCACCTTCGGTTCCTTTCCTATGCAAAACTGTCAAAGGAACTTTTGGATATTTGGCTCCT GAATATTTCCAACATGGGAAAGTATCGGATAAGACAGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTAATTACTGG CCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGGAGAGGAGAACTTGGTGTTATGGGCTAAACCTTTTCTGCAGAAGGGGA AAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTAAAGTGCAGTTTGAGATTCTCAAATCAAATGGGTAGAATGATTGAA GCAGCAGCTGCCTGTGTCACAAATGAAGAATCCAGGAGACCCGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGA AGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGTTTTCTCGCGAATGGCTGCGTGATTGATTGTTATTCACAATTACAAC AAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTTCTGAGTTTGAGGATGACGATTATCTCTAT GATCGTTAA
Protein sequence (LotjaGi6g1v0059500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIWDFSFACVSHPSRRRGSSDRNLIHHENDGGDGDKKKMSLEHNKAWLLAESGGCGGVELPNADPQSVHSSFRFSFCSQV ELESLNMSSSNAATVLMVNLDNGVSESRAREMKWRRIESLEKSISPVAHSLIRFSYGEIVSATRNFSKGRVLGRGALSCV FRGRVGILRTAVAIKQLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRRKGS SPLPWSVRYKVAIGIAEAVAYLHSGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAP EYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARRSAGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLRFSNQMGRMIE AAAACVTNEESRRPGIHEIIAILKGEEEPIFCKRKKSSFLANGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLY DR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 441 | 435 | 4.0E-184 | – | |
| PANTHER | 7 | 441 | 435 | 4.0E-184 | – | |
| MobiDBLite | 13 | 37 | 25 | - | – | |
| MobiDBLite | 15 | 37 | 23 | - | – | |
| Gene3D | 118 | 223 | 106 | 6.7E-21 | – | |
| SUPERFAMILY | 133 | 430 | 298 | 2.83E-73 | ||
| SMART | 146 | 431 | 286 | 9.8E-38 | ||
| ProSiteProfiles | 146 | 431 | 286 | 36.98 | ||
| Pfam | 147 | 420 | 274 | 1.2E-45 | ||
| Gene3D | 224 | 439 | 216 | 6.3E-56 | – | |
| ProSitePatterns | 270 | 282 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0059500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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