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LotjaGi6g1v0059500.3

Overview

Field Value
Gene ID LotjaGi6g1v0059500
Transcript ID LotjaGi6g1v0059500.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G37790.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13; TrEMBL-Plants: tr|A0A0L9U9D8|A0A0L9U9D8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0059500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:10864967..10867877) extracted from Lotus japonicus Gifu genome v1.2.

TTTTCAAATGCTCAAAACACTCCACCACACTCTTCTTCTTCATCTTCTATAGCATTTGTACCCATTACAGGTCATCACTC CAGTGACCTCAAGAAGCTCAAATTTCGAAACTTTTTGAGAAAAATGATCTGGGATTTCAGTTTCGCCTGCGTTTCCCACC CCTCCCGCCGCCGGGGAAGCTCCGACAGGAACCTTATTCACCACGAAAACGACGGCGGCGACGGCGACAAGAAGAAGATG AGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGGTGGCTGCGGTGGAGTGGAATTGCCCAATGCTGACCCTCA ATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGGTGGAGTTGGAGTCCCTGAACATGAGTTCTTCCAATGCTG CAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTCGTGCTAGGGAGATGAAATGGAGGAGAATTGAGTCG TTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAGGTTCAGCTATGGTGAAATTGTTTCTGCTACTAGGAATTT TTCTAAAGGTAATTTCTTTTTGTTTTTGTTTTGTTTCGGTTTTTGTGGTGTTATGTTGTTGTTGTTGTTGTTGTTTAATC ATAGGTGGTTCCTTTTGTTATGGTTTGTGTAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAG TTGGGATTTTGAGAACTGCTGTGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAGGCTTTTTGTAGAGAA TTGATGATTGCTAGCTCACTTCATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCCTGAGGAGGGTTTGTT TTTGGTTTACAAGTATGTTTCAGGGGGGAGCTTGGAGCGTCACTTGCATGGTATGTGGGTTTTCAAAATTTCTGTGGATC ATGTTATGTGAGGTTTTGAATTTGAAATTGATGGATTTAACTGATTCTAACATGGCTGTTTCACAGGGAGGAGGAAGGGT AGTTCACCACTTCCGTGGTCTGTGAGGTACAAGGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAGTGGAAC TGAGAGATGTGTTGTTCACAGGGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCCAAGGTGAGACGTT TTCCTGTGAATTAATTGTATACTTGTGTTTATAGCATGTTTGGATCAACTTCTCTTTCCTCAGAATCAATTCTGGTACCT AGAAACTACTCTCAGAAGCTTCTCCCCATAGTTGATTCTGACTTTAGAATCAATTGTAGAGGATTCTCAAACATGCACTT AGTACTGTGGAGATTGTCTGATACAATGATACAAGTCAATCTGATTGTTTTTGTAATCTTGTAGCTATGTGATTTCGGAT TAGCTACATGGACTTCAGCACCTTCGGTTCCTTTCCTATGCAAAACTGTCAAAGGAACTTTTGGGTATAAACTTAAGCCC TTCATGTTGATTCCTCAAAGTTTTGGTTTGTTTCTGTTATTTATTTCATTTCATATTTTGTAATTACTGAAATCTAAACT TTCTATAACTTTGCTTTCCTAATAGATATTTGGCTCCTGAATATTTCCAACATGGGAAAGTATCGGATAAGACAGATGTT TATGCTTTTGGAGTGGTTTTATTGGAACTAATTACTGGCCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGGAGAGGAGAA CTTGGTGTTATGGGTGAGTTAATGCTTTAATTCTTGCAAAGTTATCGTAATTCCTGATTATAAGATGGTAGATTTCATTC CTTCTGTGGTTTGTGGTTGAGAATAAACAGAGCATTGTTAGTATAAATCACAATATACTCCTTTCTGATAGTGCATTAAA GCTATGGTGTCAATTTCACCTTAGTTTGTTGCTTCTAGATCACAAAACAATGTGATAGCCTAACTGATTACTCCTATTAA AAATTGAAAGGAAATCGAAAGTTGTTCATTTTATCTAGTTCTAAGATCAGACCTAACTTAGAAAAAAAATCAGACTTAAT ATAGGTTAAAACCGTGAAAAATGTTATCTTTCTAATGTGTTTTAATATTTCTAATATGTCTTAGTGTATTATATTGGTCT CTTAAATAGTAAAATCTTATAAAATTCAGTCAGAATAATGAAGGCTGTGGGCGATCTTGAATCACTCGCTTTACTAAGAT CGAACTGTGTTTAGCAAGAGTGTATGTGCTGCATATTTTGAAATGCATCAAGAGCTTACTTTTTGAGTGGATAAATGATA TTAATGCAGAGTTTAATTATGTGCATTGCAATTTTAACATAGTGAATGAATCGTGTCTATCCTTTATAGTATTCAACTCA GACCAATTGTTTGGCCTTTATGACAACATTAATGCTGGTAATTTCAGCACTGCGTGAAGTTTAAGTATAGTAATTTCAGC ACTGCATGAAGTTTAAGCATAATAATTTCAAATTGGTGTGGTCTTGTTGACACGTCTAATCCGATATTCATTTGCAGGCT AAACCTTTTCTGCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTAAAGTGCAGTTTGAGATTCTCAAA TCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCCAGGAGACCCGGCATACATGAGATTA TTGCAATACTGAAAGGTGAAGAAGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGTTTTCTCGCGAATGGCTGCGTGATT GATTGTTATTCACAATTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTTCTGAGTT TGAGGATGACGATTATCTCTATGATCGTTAA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0059500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCGGAATCTGGTGGCTGCGGTGGAGTGGAATTGCCCAATGCTGACCC TCAATCGGTTCATTCTTCTTTCAGGTTCAGCTTTTGTTCTCAGGTGGAGTTGGAGTCCCTGAACATGAGTTCTTCCAATG CTGCAACGGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTCGTGCTAGGGAGATGAAATGGAGGAGAATTGAG TCGTTGGAGAAGAGCATATCACCTGTTGCTCACTCTTTGATCAGGTTCAGCTATGGTGAAATTGTTTCTGCTACTAGGAA TTTTTCTAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAGTTGGGATTTTGAGAACTGCTG TGGCTATTAAACAGTTGGATAAGGAAGACAAGGAATCTGCCAAGGCTTTTTGTAGAGAATTGATGATTGCTAGCTCACTT CATAGCCCAAACGTGGTTCCCCTTGTGGGTTTTTGTATTGACCCTGAGGAGGGTTTGTTTTTGGTTTACAAGTATGTTTC AGGGGGGAGCTTGGAGCGTCACTTGCATGGGAGGAGGAAGGGTAGTTCACCACTTCCGTGGTCTGTGAGGTACAAGGTTG CAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAGTGGAACTGAGAGATGTGTTGTTCACAGGGACATTAAGCCCTCA AACATTCTGCTTTCTTCTAAGAAGACTCCCAAGCTATGTGATTTCGGATTAGCTACATGGACTTCAGCACCTTCGGTTCC TTTCCTATGCAAAACTGTCAAAGGAACTTTTGGATATTTGGCTCCTGAATATTTCCAACATGGGAAAGTATCGGATAAGA CAGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTAATTACTGGCCGGAAGCCAATTGAAGCAAGAAGGTCTGCAGGA GAGGAGAACTTGGTGTTATGGGCTAAACCTTTTCTGCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACT AAAGTGCAGTTTGAGATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCCA GGAGACCCGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTATTTTCTGCAAAAGAAAGAAGTCCAGT TTTCTCGCGAATGGCTGCGTGATTGATTGTTATTCACAATTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTT GGCAATGCTAGGAGTTTCTGAGTTTGAGGATGACGATTATCTCTATGATCGTTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0059500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSLEHNKAWLLAESGGCGGVELPNADPQSVHSSFRFSFCSQVELESLNMSSSNAATVLMVNLDNGVSESRAREMKWRRIE SLEKSISPVAHSLIRFSYGEIVSATRNFSKGRVLGRGALSCVFRGRVGILRTAVAIKQLDKEDKESAKAFCRELMIASSL HSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRRKGSSPLPWSVRYKVAIGIAEAVAYLHSGTERCVVHRDIKPS NILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARRSAG EENLVLWAKPFLQKGKGAIEELLDPQLKCSLRFSNQMGRMIEAAAACVTNEESRRPGIHEIIAILKGEEEPIFCKRKKSS FLANGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYDR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001:SF707
2 403 402 3.1E-181 –
PANTHER
PTHR27001
2 403 402 3.1E-181 –
Gene3D
G3DSA:3.30.200.20
80 185 106 5.8E-21 –
SUPERFAMILY
SSF56112
95 392 298 2.16E-73
IPR011009
ProSiteProfiles
PS50011
108 393 286 36.98
IPR000719
SMART
SM00220
108 393 286 9.8E-38
IPR000719
Pfam
PF00069
109 382 274 9.7E-46
IPR000719
Gene3D
G3DSA:1.10.510.10
186 400 215 5.9E-56 –
ProSitePatterns
PS00108
232 244 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0059500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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