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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0064100 |
Transcript ID | LotjaGi6g1v0064100.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TAIR: AT3G11420.1 beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604); Swiss-Prot: sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TrEMBL-Plants: tr|V7D191|V7D191_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0064100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:11851147..11856084) extracted from Lotus japonicus Gifu genome v1.2.
TATGATGTTCCATATAGTATACCCCACAAAGACAAAGGCCCAATCCAACAAAACAGAACTGTTCCATTTTCTTTCTTCCC ACCGAATACTTCACTCTGTGTGTGTCTGTCTATACGTGAGTGGTTCTCCTTTATATGTATATGTAAACAGCGAATAATGA TCTCAGGACCAATCTGAGGATTCTGCTTTCTGCAATCTGCAATCTGAAATCTGCAATCTGCAGTAGAACAAAATAACCAA AAGAGAAAATAAGAAGAAGGAGGAGGAGATTTCTGAACAATGCGAAAACCATCCCCTTCTTTTGATTGAGTACGCTAAAT TATCTCTTTGCACCATTTTTACGCTTTTTGATCTTAATCTTCATCTGGGTCATCGTCATATTCGTTATCTATGTTACAGC TTTCACCTTTTGTTATACACTTTCTGTTTTCAGTTTTTGATCCTCTGTTTTGCTGCAGGGGATTCTCCAGGAATAAGAGC CAGAACAGGTTGCAATTCAAAAGATTGTGAAAAGAGGAGCAGCAGAATCATATAAAACAGCATAATAGGAAAGAAGTATA CGAATTTGATTGTTAAACCAAGGTATGATGTGAGATTCTGATTGTTTGAAGGATTTTGTTTGGTTTTTTATTCCATAATT GTTCGAAATTTCGGATTACTTAATGCAAATAGTGTTCTTTATTTTCAAAAAAATTATTATTTTATTTTATTTTTGCATTT TGAAGTTGCTGAGCGTTTTTATGGGAGTGAAATTTAGTTGATTATTTAACGTGATAATTGGATAGGCAACATGATTAATG CTTTGATCAAGTTGTGCAGATGGAAATCATGTTTTGGCTTGTATGTCTGTGAACTGATAATTTTAAGAAACAAGTTTCAT TCTTCCCATGTTTTGCTCTGTATTTCAGTGGAATTTTTTGTACCCCTTTGTGGTTTATATAAGGATTTCAAATAATTCTT TCCACACTTCTAACTCTGTTACCCATTTCCAAAATTGTCATCCTTTTTTCTGCATAATAAGGTGCACAATTATATATCTT TTTATTATTATTGAAATTGTGTTTGAGTAAGCTTGCCAAGAATGTTGTAATTTCTCTTGGATTTTTTTGTTGTAATTACT TGGAGAGACCAAAATTAAAACCTAATTGGTCATTCATATACATGCCAGTATTATACATCTTTCTAGAGATCTGTATAAAG TTGCCATGGAAAAACATTGTGGCGTGTAGATCAACTGACATTGGGTTGTTCTAGTTTAAGCATAGATCTTATATTCGAGT CTTTGTGAATGCAGCTGTGTTACCTAAGTTTTAAACAAAACAAAAAAAAAAAACATAGTGAATCCTCATGCTATTTCTTC TCTACATAAATGAATTTATATCAAAAGCAGAGTTGAAAATAGTTATGATAAGGATGATAAGATGTTTAAACAATCTAAGA TTAATCACAATAAAAGGAATCAAAGTAGAAAACATGTAAAGCTTAATTATAAATAATAAGATCAAAATGTTCATTGATGG TTTAGATAACTGATATATTTGATAGTTAGAGTTCTCTCCCTTTAGAAACAAGCAATTAAAGAGAAAAAAAAAACTCTTTC AAGGGAGTGGGGATAATTAAAAATTCAAGTCCAAAAACAAAGCATTTTTATCTTTTGTTGTGTAAGGGCATGTTTAGTAC ACTACTTAGTTCAGCAATTATGATGGGTCTGAAATCATCTTTAGCAGTAAATATTGGTTCTTATGTATTTGGCGTCTTTG ATTAATTTGAAGTTCTATGATTTGTTATAATATATGTCTAAATTGTTGCTTATGATCAGATATTTGAAATGTAATAGGGA GAAGAATATGAATCTTTCTCGCTTGGAATCTTGTCATGACTCACTTAAAGCATCTAGATTCCCTTTTCTCCCAGAAAAAC TTGGTGATTTGGTTATAGTCCTAATACGGATTGGCATACTCATTTGCCTTATAGCATCAGTTTCACTTGCCCTTCACTCA GCATTCTCTAAACAAGACCGGTGGTTCCCTTTACCAGAGCATTTACATGTCTTCCAGAATGATTCAGTCGTTGACAGTGG ACCCACAAACATCTCACACATTCTGTTTGGCATTGCTGGTTCAGCCAAGACATGGCATAACCGAAGCAACTACAGTAAGC TATGGTGGGACCCGAACACGAGCCGAGGTTTTGTTTGGCTTGACAAGAAACCTCATCTTTCGCACCTTGACAAGCTAATG CCATATCAAATCTCACAGGGCTGGACTCGTTTCAGGCATGTGCACTCAGCGTCTGCAGTTCGGATAGCGCGGATAGTTTT CGAGAGCTTTAGACTTGGTTTGCCAAATGTTAGATGGTTTGTGATGGGAGATGATGATACAGTATTTTTTCCCGAGAACT TAGTTACGGTGCTGGCAAAATACGATCACAATCAATTGTATTATATTGGTGGGAATTCTGAGAGTGTGGAGCAAGATGTG ATGCATTCTTATAACATGGCTTTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAGAATAAT GGATGGTTGTCTTAGCAGATACTACTATTTTTATGGCTCTGATCAGAGGGTCTGGGCCTGTGTTCATGAAATTGGGGTTA CTCTTACTAGAGAAAGTGGATTCCACCAGGTATACTTTGTTTCCACTTGTTTTTTTTTTTTTTATCGGCCAAATTTCCCC TCCAGGGATTTGATCCCTGGACCTGCCCCTCCCCAACCCATATGTCCATCAGCTCTTACCAAGTTAGTGTATTTGTATGT ATATTGTATACTCTCCCTTGCCCTTCTATAAATAATATCAGCATAGATGCAAATCTTTTGATCAATATTGTTCAAGGAAT GAACAAGGGATCATGTTGCATATATCAATTTTTTCTAAAAGCATCCTGGATGAAAATATTTGGACTTATCCTTCTACAAG AAATTTACTGATTATATTGTCATTTTCTTTCAGCTTGACATAAGAGGGAACCCATATGGTCTTTTAGCAGCACACCCCAT GGCACCTCTTGTATCACTTCATCACCTTGACCAATTGGACTCATTGTTTCCGAACCAAACTCAAACAAATTCATTGGAAA AGCTCTTCATCGCGTACCGCCTTGACCCTGCTCGGATAGTGCAGCAAAGTTTTTGCTATGATCACAGGCGTGAATGGTCA ATATCTGTTTCATGGGGCTACACGGTTCAAATCTTCAAAAGTCTGTTGATACCAGCTGATTTGCAGATGCCATTGCAGAC ATTTCGAACATGGCGAAGTTCTAGTGATGGTCCGTTCACGTTTAATGCTCGACCTATGAGTCACGACCCGTGCCAGCAGC CAGCTGTATTTTTCCTGGATCATGTTGTGAAGGTTGGCTCAAGTGGAAGTATCACAATTTATGAAAGATATGTAGCCGAT GAAGCAAAGAAGTGCAAAGGAGCAGATAACACTATAGAAGTGCAGAGAATTAGAGTTTCCGCCTTGACGCTTGACCCAGA ATATTGGAAGAATGTATCTCTCTCTCTCTCTCTCTCCCACTCACACACACGCAGAATCAAAACCAAAATGTCATTTGATT TAGGGATAAAGATCCTTTGTCCCTATTTGTTATATCTTTCCCTGTCCCACCAATTAAATTGTCATGTAGGCATGAATATG AAACTTATAACCTTAAATGACATGAGCCAATTTTATTGGTGAGACAGGATAGGGGACACAAATGGATTAGAAAATTTTGG TACTTTTAGAACTTAGCTTTGCATGATACATACCTGTAAAATTTGTAATGTTTGATTTTAGTCTATATCAAAATTTCATT CGTGTGGACTGGTTTCAGCTAAAACCACATGAGTTTTGTATTTTCTAACGGCTGATACCGAATAAAATTTTCATATGGAC TAAAAGCAAAATGTGTCAATCTTATAGATACAAAAAAAACATAATTAACCATACTCTACTAATCGACTTGAATAGAGTTG AAATCCCTATTCCTTTGTAGGTGGATTTTCTATTGATCATTTGCTTTGGCTATTCTGAATCAGGTACCTCGTAGGCAGTG CTGCCAATTAATGGATGGTGGCAGCATAAAGAATAGCAGTATTCATATCAGAATTAGGAAGTGCAGACCTCAAGAAACAA TTACTGCTTAGGGATCAGTTGTTTTTGTTGGTCGGCGTAGTTAGTAGATTACTAAGAGTTTGAGTCTTATAGGTCTGGTT ACTTACATTTCCACCTCTATGTACATACACAGTTGTCAAAATATTCACATAATCTCAAATTTTGATCAATAAATGTTCTC ATGTAGTTTTTCTACTTGTATGAATTCCCTCATATATATATTGTAGAAACATATTTTGTTTCTCTCTCCAATTTTCATAT TCTGGCTTCCCTCTTTAATCATCCAAGCATGCGTTTTTCATGACTTCAGGAAGATCTTCGCTCATGCTTTCTACATTATT GTGGTAACTACCATTCCTCTATACTATTTTGGTGATGCTCAAATTTACATTTTACTTTATCGAGACTTTATATGCAGGTC CAAATGCTGAGAACTGAAGCACAGACAATAGGTCCCGGAGATAACACCATCACCACATAAATCTAGACCAATTTTGTTCG TGCTCTACGATGAACTTCATATTGTTTAATGGTCGTTGCTGGATTTCTGTCCGCCACAGTTTCTCTATCTATATAAAGAG CTTACTTTTAAGTGACAGGTTCAGGATAAAGAATTGAATGGTGGATGAAGCTTGTTAGAAGATATATTTCCAGAGACAGA ATTTGGTAAGCTGTTGTTTATTCTCTCCCTTGTAAGTTGTAACTTGCATAAATTTGGTTACTGGAAACTGAATTTGGCCT TGCTTTGTGGCCAAATTGATACATTTACTCGCACTTGATCTTTCATCACTTCACTTCT
CDS sequence (LotjaGi6g1v0064100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCTTTCTCGCTTGGAATCTTGTCATGACTCACTTAAAGCATCTAGATTCCCTTTTCTCCCAGAAAAACTTGGTGA TTTGGTTATAGTCCTAATACGGATTGGCATACTCATTTGCCTTATAGCATCAGTTTCACTTGCCCTTCACTCAGCATTCT CTAAACAAGACCGGTGGTTCCCTTTACCAGAGCATTTACATGTCTTCCAGAATGATTCAGTCGTTGACAGTGGACCCACA AACATCTCACACATTCTGTTTGGCATTGCTGGTTCAGCCAAGACATGGCATAACCGAAGCAACTACAGTAAGCTATGGTG GGACCCGAACACGAGCCGAGGTTTTGTTTGGCTTGACAAGAAACCTCATCTTTCGCACCTTGACAAGCTAATGCCATATC AAATCTCACAGGGCTGGACTCGTTTCAGGCATGTGCACTCAGCGTCTGCAGTTCGGATAGCGCGGATAGTTTTCGAGAGC TTTAGACTTGGTTTGCCAAATGTTAGATGGTTTGTGATGGGAGATGATGATACAGTATTTTTTCCCGAGAACTTAGTTAC GGTGCTGGCAAAATACGATCACAATCAATTGTATTATATTGGTGGGAATTCTGAGAGTGTGGAGCAAGATGTGATGCATT CTTATAACATGGCTTTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAGAATAATGGATGGT TGTCTTAGCAGATACTACTATTTTTATGGCTCTGATCAGAGGGTCTGGGCCTGTGTTCATGAAATTGGGGTTACTCTTAC TAGAGAAAGTGGATTCCACCAGCTTGACATAAGAGGGAACCCATATGGTCTTTTAGCAGCACACCCCATGGCACCTCTTG TATCACTTCATCACCTTGACCAATTGGACTCATTGTTTCCGAACCAAACTCAAACAAATTCATTGGAAAAGCTCTTCATC GCGTACCGCCTTGACCCTGCTCGGATAGTGCAGCAAAGTTTTTGCTATGATCACAGGCGTGAATGGTCAATATCTGTTTC ATGGGGCTACACGGTTCAAATCTTCAAAAGTCTGTTGATACCAGCTGATTTGCAGATGCCATTGCAGACATTTCGAACAT GGCGAAGTTCTAGTGATGGTCCGTTCACGTTTAATGCTCGACCTATGAGTCACGACCCGTGCCAGCAGCCAGCTGTATTT TTCCTGGATCATGTTGTGAAGGTTGGCTCAAGTGGAAGTATCACAATTTATGAAAGATATGTAGCCGATGAAGCAAAGAA GTGCAAAGGAGCAGATAACACTATAGAAGTGCAGAGAATTAGAGTTTCCGCCTTGACGCTTGACCCAGAATATTGGAAGA ATGTACCTCGTAGGCAGTGCTGCCAATTAATGGATGGTGGCAGCATAAAGAATAGCAGTATTCATATCAGAATTAGGAAG TGCAGACCTCAAGAAACAATTACTGCTTAG
Protein sequence (LotjaGi6g1v0064100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLSRLESCHDSLKASRFPFLPEKLGDLVIVLIRIGILICLIASVSLALHSAFSKQDRWFPLPEHLHVFQNDSVVDSGPT NISHILFGIAGSAKTWHNRSNYSKLWWDPNTSRGFVWLDKKPHLSHLDKLMPYQISQGWTRFRHVHSASAVRIARIVFES FRLGLPNVRWFVMGDDDTVFFPENLVTVLAKYDHNQLYYIGGNSESVEQDVMHSYNMAFGGGGFAISYALAAQLARIMDG CLSRYYYFYGSDQRVWACVHEIGVTLTRESGFHQLDIRGNPYGLLAAHPMAPLVSLHHLDQLDSLFPNQTQTNSLEKLFI AYRLDPARIVQQSFCYDHRREWSISVSWGYTVQIFKSLLIPADLQMPLQTFRTWRSSSDGPFTFNARPMSHDPCQQPAVF FLDHVVKVGSSGSITIYERYVADEAKKCKGADNTIEVQRIRVSALTLDPEYWKNVPRRQCCQLMDGGSIKNSSIHIRIRK CRPQETITA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 27 | 27 | - | – | |
PANTHER | 20 | 487 | 468 | 3.7E-209 | – | |
PANTHER | 20 | 487 | 468 | 3.7E-209 | – | |
Phobius | 28 | 49 | 22 | - | – | |
TMHMM | 30 | 52 | 23 | - | – | |
Phobius | 50 | 489 | 440 | - | – | |
Gene3D | 75 | 277 | 203 | 8.2E-11 | – | |
CDD | 171 | 238 | 68 | 3.04669E-4 | – | |
Pfam | 209 | 461 | 253 | 1.3E-108 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0064100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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