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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0066400 |
| Transcript ID | LotjaGi6g1v0066400.3 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate 5-kinase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A0B2PJ53|A0A0B2PJ53_GLYSO Delta-1-pyrroline-5-carboxylate synthase; Found in the gene: LotjaGi6g1v0066400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:12603813..12609986) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAACGCAGATCCTTGTAGAGATTTCATCAAAGACGTGAAGCGCATCATCATCAAGGTTCTCTCCTCTCTCACAAA ACAATATCTTCTTTTTGATTACTTTGTGTTTCATTTGTGTGTTTGTTGTGTATAGTTGTTTTGGCCTGCAATGCAAATGG CTAAGGTTTGTTTGATTCGTTTTTTATATCAAGGTTGGCACTGCTGTAGTCACTGGTAAAGATGGAAGAGTTGCTGTTGG AAAATTAGGGGCACTCTGTGAGCAGGTTTGACTCTGTATATATATATTGTGGTTCTGGTTTTTGATTTTTTGAGAGATAA AAATGAGATTTTGAATTTGGAATATATACCCCTTTTAAAAATTAATGCCAGATTAAGGAGCTGAATTCTCTGGGCTATGA GGTTATTTTGGTGTCTTCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATATAGGAAATTGATTAACAGCAGGTAAG GTGTATGTGATTATGCTTGTGTGAACCTTAATTTGTTTTGTTACTTTCATTATACAAACATACTCTTCAAAGTGTTATTG GCACAATACTAGGCTTTTTTTTTTTTTGAAGCGGGTTGTAAAATTTATTCACAGTTCACTTTCTCTTCCATCTCAATTCC ACTTACATTCTCTTTCTAACTGTCTCTGCTTTTCCTATCACATCACACATCATATCTCTTATTGCTAACCCTTTTCTTAC TATTTATCACTTGTTGTAGTTTGTTTTAGAGAGAATAAAACATCAATGAAAATTTTAATTGGGGTTGTTACTTGCAGCTT TGCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGCAGCCTTATGGCTCTTT ATGATTCTTTGTTTAGTCAGGTAATTGTTGTTGATATATTTGATGTTGATGTCTGAAGTAGCAATTCATGCTAGCTCTTA ATCGAAATTGTTTCTTGTCTAGACTTTTGTTCTACCCTTCATGTCAAGACCACTTTCTGTTATTTTCTTATTTTAGGATA GTTGACATTGATGTAGTAACTGTTTTCTCTACATGCCCTGCAGCTAGATGTGACATCTGCTCAGCTTCTTGTGACAGACA ATGATTTTAGAGACAGAGAGTTCAGGAAACAACTCAGTGAAACTGTGAAATCACTGCTAGCTCTAAAAGTTATTCCTATA TTTAATGAGAATGATGCAGTCAGTACTAGGAAAGCTCCATATGAGGTTTGTTATTTTACTTTCCTAACAAAACTGAACTT AATATTGAAGCTGATTTCTTCAAGCTACGCTCCTATATTAAAAAATAGTGGCAATAAGTTTAAATGTATTATTTCTTTTG ATAAATTTTCCAAACTTTAACTCTATCACAGGTTTTCTTTAGACTGATCTGTATGCGGTAAAAAAATATTTATTATTTTG TCCATTATTATGTACCAACTCTCCCAAAAATCCTTAGCTGTTGGGTGAAGACACATGAATGATTTTATATTATTCTTCTA ACACGCCCCATCACGCAACATTGGGTTTGAAGCGTGGACAATGGACAAGGTCAAACCTACCTTGTGCTGAAATTCAAATT TTTATTAGAATAATGGGGGCAACAAGGATCAAACTTTAGACCACTTGGTCATAGAGGCTCCAATACCATATTAGGAATTC AGGTTAGGCCTAACTCTGTCACAAAAGTTAACTATGAGATCAAGACTGCTGTACCATTTATATGGACTTATTTAGCCATA TCTCTAGTCAATGTGAGACCTTAACACTCCCCGCTCATGCTCAGGGGTGGACATCTGCGGGTAGCTCAATTATGGGTGAC CCGATTAAAAGATCTATGATAGACTTTGATACCAAGTTATGAACCAACTATCCCAAAAGTTTAAGCTGTTGGGTGAAGAC ACATGAATGATTTTATATTATATTTCTAACATACATCATCTAACTCAACCTACTTAAGTAAATTTGACTGCTTGTATCCT TGTAAAAGATTCTCCTTTGCCTGTACAGAATTCCCGGCATTTGTTAAAACTCTTCCTTTAAACTTGTGTTATATAAATGG TGTTTCAATGTTTGATTTTGCCAAAAGAGCAGGTATGAGAAATTGAGAATAGACTAAAAAAGTACAAGTAGATGTTTACT TATAGGTCAGCTTCAGTTTACATATATATATATATATATATATTTATATATGATCTTTCTTAGTTGTTTGGTTGGAGTTG GCTGTAGGATTCTCTGATAATTTTATTTGAACATCAACTTGTGTTTTCAGCTTGAAAGTTGAGAGTTTAGACTTGGGAGT TTACTTCCTTGACTGATTACTTATTCTTTCCATTTCTAACTATTTATGAATTTAAAGTTTCGCCAACTCAATTTTTGCAG GATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTGTTGGCCTTAGAATTAAAAGCTGATCTTCTGATTTT GTTGAGTGATGTAGATGGTCTTTATAGTGGCCCTCCAAGTGACCCACATTCTAAGCTTATTCATACATACATTAAGGAAC AGCATCAAAGTGAAATTACCTTTGGAGACAAGTCTAGGGTAGGAAGAGGGGGAATGACTGCCAAAGTAAAAGCTTCAGTT CATGCAGCTGACGCTGGCATTCCTGTTGTCATTACCAGGTGCTCTATTATATTATGTTACCAAGAAAGATTAAGATTGAA AATGTAGCTTTATTATTGCCATTTTCAAAAGCACCATTGTTGAAGGCATTTTGATATCCCCTCTTTTAGAATTTATTTAA ACCTGTTTTCCGCATAACTGTTTTCAGTTGGAAATTTTTTGTTTAGGCTGCGACACATGAACTCACTATTTTTGCTAATC CACAAGCAATTTTGAGAAATCTAAATTAAAAAGCTAGATCTATATAATTGCATGCAGTTAGTCATTAAATTTAACAGCCT ATGAAACCACCCATGTTCTTTTTATTCCTTTTCCATTGTTGCTATACTAGTTAGAAATTATAAATTCAAGTATACAATGA AGTCCATTATCTGTGCAACCAGCTTTATTTGAGTCTCATGTTGCTTCTGGTACATTTTCTCTCTCTCCTTTCAGTGGTTA TGCAGCTGAAAATATAATGAAAGTCCTCCAAGGACAACGTATTGGAACCCTTTTCCACAGAGATGCGCATATGTGGGCCC CAGTAAAAGGGGTTGATGCTCGTGAGATGGCAGTAGCAGCTAGGGACTGTTCCAGACGGCTTCAGGTCTCTTTATACCTT AAAACTTTTAGAATGTGTGGCGGATCATTCCTACTTCACACATGCTAATATCCTAAATCCTAATCTTACATGATTACAGG CGTTATCTTCGGAAGACAGGAAACAAATTTTGCTAAAAATTGCTGATGCCCTGGAGGCACATCAAAAGGAGATCAGGGTT GAAAATGAAGCTGATGTTGCTGCTGCACAACAAGCAGGATATGAAAAATCCTTAGTTGCTAGGCTGGTTTTAAAGAATGA AAAGGCAAGAGTTCACCTAAAGAAGAAACTAGTATTATTTTTAACTAGCTGCAAATTTTTGATGATAAAATAATAAATTG TGATAACTGACAGCTTGCAAGCATTGCCAACAACATACGAATTATTGCAAACATGGAAGATCCAATTGGTCGAGTATTAA AACGAACGGAGGTAATGAAAAATTTATTCTGACTGTTTATATATTATTGATCGTTGTAGTCTTAAAATAACAGTAGGTGA GGCCACTGTCTAGGTTGAGTTAATTTCCCTTTCACTTATTGTACTTATTACAGATTCTAGTTTTACAACATACCAGTAAG TAGAAGGAAATGACTTGTACTACATCCAATTTTGTATAGGATCCAAACTCCAAAATATGTGAGTGCAATTGTTTCTTAGT CATAGAGTACATTGTTTATGATGTTCTGTACATCTTTATCATGGGCTCTGATAGAATTAGACTTAGATCACCTATTAATA AAGTGTTTTATAAATGATATAAGAAATTAGAAGATAATGGGTTTGGGCCTGAATTAATAGGCCATTGTAATAGTTAGTTA GGCTGTTGTAACAATTAGTTAGCTAGCATTCCTATTAGAGGAATGGGGAGGTAGTTAGAGAGATCATTCTGGAATGGAAT CAGTTTAGGGAGAAACTAGCTTCTCGAATGCTAGTGTGTGTAATCAAATTCATTCTTCAATTAGAGAAATACTTCCTCTC CTCTGTCCTTTCTTTTCATCTACTTCCATCTGATCCAGTTTCTATCATACTCACTCTGATAGTCTGATTGTACTGAATTT TTAATATTAGTTATTGAACTTTAACATTTCTGACAGCTATCTTTTTATTAGCTCGCAGAGGGGCTAATTTTGGAGAAAAC ATCAGCTCCTTTGGGAGTTCTCCTAATTGTGTTTGAGTCCCGCCCCGATGCACTAGTACAGGTAAATTCAACTTTTTATA TTGTTTTCCTTTTTTTAAGACCTATTTGAGAATATTAAATTTTGACTATAGGTCATACATGGATGGTTGGTCAAGATTAA AAGTTGTTTTATGGTCGTGTTACATTTTAAAAAAGTCACAAGTCTTTATGTCTAAATCATGACCATTTATTGATAAATCT AGTAGTCAAGGTTTTCTCCACTCACTTTCAGATACAAGTAACACTCAAATCAAACATCTGCTGTGTGTGTGTGTGTCTAT ATATATATATAGTAGTTACCTGTCTAGATGACATGCTTGGCCACCTTTGACTTTATCTACTAAGCTTTGGATTAGGCCTT GCCTTAAAAATAATAAAATGAATTCATTCTTCCTGTACCAATGAACTTATTTAGATTTGAAAATTGTCTACATTGCAGTT GAAAAAAATTCTAGATTGTTTGTCTATGAATTACATGCTTTTCATCTGCATTCTAAGCCAGTGGTTTCATGTAATCTGAA CAGATAGCTTCTTTGGCAATCCGAAGTGGCAATGGGCTTCTCTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAAT TTTGCACAAAGTCTGGTTTCAAATTAAATGATGATTTGTGAACCCTTTTCTTTTTAGTTTATATTTGGTTTGGCAGTCTG AAACTCAACAGTGAACACTTTTCTAGGTAATTTATCACATCTAAAATTTCAGGTAATTACTGAAGCTATACCAGATACTG TTGGTTCAAAACTTATTGGACTTGTGACGTCAAGAGAAGAAATTCCTGAGCTACTTAAGGTGAATATAACAGTAGAAGTT AATTCCTGATTCATAAAAAATGCTCACTTTTAAGCTTGGCACCCTTAGCTAAAGATAGAATCTGAGTTCAATTTATCTTT CAGCTGGATGATGTAATTGATCTGGTGATTCCAAGAGGAAGCAACAAACTTGTGTCTCAGATCAAGAGTTCCACTAAAAT TCCTGTTCTGGGTCATGCTGGTAAGACCTTTCTGCTTAACATGCAACCGGTGCTTGAGTCGGTATGTTAAATCATTTTTT AAGAATTTAACCGTGAATATCATAATAAACCACATTTTTGCGAAACCAGATGGAATTTGTCATGTCTATGTTGATAAATC TGCGAATTTGGAGATGGCGAAGCAGATCGTGCTGGATGCAAAAATAGATTACCCAGCAGGCTGCAATGCCATGGTAAATT TATATGTACTGGATGACAATGCAAGCTTTGTTTGCTGGCTTGTTTTTCTTACTTTTCACTACCACAAATAACTTATATGC TAATTTAATTTCAATGTTAGGAAACTCTTCTTGTTCATAAGGACTTAATAGAGAAAGGTTGGCTCAACAATATTATTGTT GACCTACGGATAGAAGGTATGACTTTGGCAAAGAGTTCTAACTGGTCTATTATCTGTCTTGTTTCTGTTCTTAGATTGAA GAGTGGTTTCTTGAAGTAAAATGAACTACTATTGCTGATTATCAAGTTTAGTGAATGGTTAAATGCTTTAAAATTTATGT AGGCGTTACATTATATGGAGGACCCAAGGCAAGTTCTCTGTTAAATATTCCACTGGCTGGTTCATTTCATCATGAGTACA GTTCGTTGGCTTGCACTGTTGAAATTGTGGATGATGTTTATGCAGCTATTGATCATATAAATCAATATGGAAGGCATGTT ACTCTAATATTTCT
CDS sequence (LotjaGi6g1v0066400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACGCAGATCCTTGTAGAGATTTCATCAAAGACGTGAAGCGCATCATCATCAAGGTTGGCACTGCTGTAGTCAC TGGTAAAGATGGAAGAGTTGCTGTTGGAAAATTAGGGGCACTCTGTGAGCAGATTAAGGAGCTGAATTCTCTGGGCTATG AGGTTATTTTGGTGTCTTCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATATAGGAAATTGATTAACAGCAGCTTT GCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGCAGCCTTATGGCTCTTTA TGATTCTTTGTTTAGTCAGCTAGATGTGACATCTGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGACAGAGAGTTCA GGAAACAACTCAGTGAAACTGTGAAATCACTGCTAGCTCTAAAAGTTATTCCTATATTTAATGAGAATGATGCAGTCAGT ACTAGGAAAGCTCCATATGAGGATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTGTTGGCCTTAGAATT AAAAGCTGATCTTCTGATTTTGTTGAGTGATGTAGATGGTCTTTATAGTGGCCCTCCAAGTGACCCACATTCTAAGCTTA TTCATACATACATTAAGGAACAGCATCAAAGTGAAATTACCTTTGGAGACAAGTCTAGGGTAGGAAGAGGGGGAATGACT GCCAAAGTAAAAGCTTCAGTTCATGCAGCTGACGCTGGCATTCCTGTTGTCATTACCAGTGGTTATGCAGCTGAAAATAT AATGAAAGTCCTCCAAGGACAACGTATTGGAACCCTTTTCCACAGAGATGCGCATATGTGGGCCCCAGTAAAAGGGGTTG ATGCTCGTGAGATGGCAGTAGCAGCTAGGGACTGTTCCAGACGGCTTCAGGCGTTATCTTCGGAAGACAGGAAACAAATT TTGCTAAAAATTGCTGATGCCCTGGAGGCACATCAAAAGGAGATCAGGGTTGAAAATGAAGCTGATGTTGCTGCTGCACA ACAAGCAGGATATGAAAAATCCTTACTTGCAAGCATTGCCAACAACATACGAATTATTGCAAACATGGAAGATCCAATTG GTCGAGTATTAAAACGAACGGAGCTCGCAGAGGGGCTAATTTTGGAGAAAACATCAGCTCCTTTGGGAGTTCTCCTAATT GTGTTTGAGTCCCGCCCCGATGCACTAATACAATGGTTTCATGTAATCTGA
Protein sequence (LotjaGi6g1v0066400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENADPCRDFIKDVKRIIIKVGTAVVTGKDGRVAVGKLGALCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRKLINSSF ADLQKPQVELDGKACAAVGQSSLMALYDSLFSQLDVTSAQLLVTDNDFRDREFRKQLSETVKSLLALKVIPIFNENDAVS TRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVDGLYSGPPSDPHSKLIHTYIKEQHQSEITFGDKSRVGRGGMT AKVKASVHAADAGIPVVITSGYAAENIMKVLQGQRIGTLFHRDAHMWAPVKGVDAREMAVAARDCSRRLQALSSEDRKQI LLKIADALEAHQKEIRVENEADVAAAQQAGYEKSLLASIANNIRIIANMEDPIGRVLKRTELAEGLILEKTSAPLGVLLI VFESRPDALIQWFHVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 411 | 407 | 2.6E-228 | – | |
| Gene3D | 5 | 286 | 282 | 3.4E-89 | ||
| PANTHER | 5 | 411 | 407 | 2.6E-228 | – | |
| Pfam | 15 | 260 | 246 | 8.0E-40 | ||
| SUPERFAMILY | 15 | 280 | 266 | 7.99E-58 | ||
| Hamap | 15 | 291 | 277 | 30.596 | ||
| TIGRFAM | 15 | 284 | 270 | 8.7E-66 | ||
| PRINTS | 52 | 66 | 15 | 6.6E-59 | ||
| PRINTS | 96 | 124 | 29 | 6.6E-59 | ||
| PRINTS | 136 | 157 | 22 | 6.6E-59 | ||
| PRINTS | 175 | 202 | 28 | 6.6E-59 | ||
| ProSitePatterns | 232 | 249 | 18 | - | ||
| PRINTS | 234 | 254 | 21 | 6.6E-59 | ||
| Gene3D | 287 | 415 | 129 | 6.2E-32 | ||
| SUPERFAMILY | 294 | 413 | 120 | 1.13E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glutamate 5-kinase activity | Catalysis of the reaction: L-glutamate + ATP = L-glutamyl 5-phosphate + ADP + H(+). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0066400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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