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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0069400 |
| Transcript ID | LotjaGi6g1v0069400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triose-phosphate transporter family protein; TAIR: AT3G11320.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320; TrEMBL-Plants: tr|V7CZE2|V7CZE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0069400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13300899..13303779) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGGTTCGAGCCGTTTCTTCACGATTGGGCTTGTTGCAGCGTGGTACTCTTCCAACATTGGAGTGCTTCTGTTGAA TAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACTGCGTGCTCGTTGCTCA GCTATATTGCCATCGCGTGGATGAAGGTTGTGCCTATGCAGACCATTCGATCCAGGGTTCAATTCTTCAAGATCTCTGCG CTTAGTCTCATTTTCTGTGTCTCTGTGGTGTTTGGGAACATCTCGCTTCGGTATTTGCCTGTGTCTTTCAACCAGGCTAT TGGTGCTACCACGCCTTTCTTCACTGCGGTTTTTGCTTACATCATGACATTCAAGAGGGAGGCTTGGCTCACTTACCTGA CCCTTGTTCCTGTTGTTACTGGGGTTGTCATTGCAAGTGGGGTATGTAATTTGAGACCCTTGTTGTTTTCTTCCTTTGTT GTTTTCCATTGTGTAATCGTGGTTCAAGTTTTAATTGGTGATGATGATGCTGCTGTTTTGGTTATGTTCTTGTTGTTAAT GGGTATGGCTAGATGTAGGAAATAATTTTGGATTTTGACTTTCTAATGCTTTAATCATCGAATTTATCTAGTTTAGGATT GTTTCAGATGTGATTTCAGATGCCTAGCAAGAAATTAAGCACTGTTGAATTGGAATTTTAGAAATTTGTGTTGTTCTTCT TGTGTGTCATTCCTTGTGTTCAGTAAACTTAGGACCCGTTTGGATACCCTTTAGAAAGTATGTAAATGAGAAACTAACAT ATCTCAATGCACTTTTTGGTGAAGTAGTAAGTTGTTACTTCATCAAAAAAGTGTCTCATGATGCGTTATTTTCATGTTTT CCGACTTTCTAATAGGTATGCAAACAGGCTTTTATGTGAGGTTAGCAGATTGGCAAGCATTTGTTTTTAATGAGGAATTT AAGATGAATGGAATTCATTTTTTGGTGAGAGATAGTTCATGCTTCCCGATTTTACGTGTTATCCAGTTTTTAAGTAGTAA TTGATACATTTGTCTGATGTATTCTTGGAGTGCTATTAATTTGTTAAAAGTAAAAATTATCTGGCTTCTGATATGTTTTT CTTCTTTCTCTACTTGGTCATAGGGTGAACCAAGTTTCCATTTATTTGGATTCATAATATGTATTGCGGCTACAGCGGCA AGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGGTAAGGATTGAGGAAGTCAAGATTAGATCAGTA ATCATTAATTTATCGCTGATTTTTTTGTCTTTTTTCAAGGTATATATTCAAATAGGGCTGACATCCTTCTTCTTGTTTAC CAGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTTCTTCTTCCTGCCACACTTA TAATGGAAGAAAATGTTGTTGGCATCACCTTGGCGCTCGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAAT TCGACACTTGCGTATTTTGTCAACCTGACCAATTTTCTGGTCACGAAACATACCAGTGCTTTGACCCTTCAGGTAAGTTC CCATTTATTCAAATTGGCGTTTATCTCATCAGTTGGTAGTTGGAACATTAGATTCAGATTTTGGGTGTTTGTCAAATTGA GTTTATAATCAAATTGCAAGATGTGTCACAGTCAAGCATGGTCCTGATCACCTTTATTTTTATTTGTTCTTTAGCAATAT GCATTGGTACAGCAGTTTGTCTGTGGTTGTGGAGTATCTTGTTCCCTGGTTATTTTTTTCTTTTTTATTTGAGAATGAAA TTCTTTGAGAACAAATTACCTGAGGTCATTTGAGTTTTTATGCCTTGTGTGTAGTCTACTTTCTCAAAACTCATAGATAT GTAGGTTTTCCTGTTCTATTTTCTGTTACAATCAGTGATTTCATAAGTAGTTCTAGCAAAATTAATTTATGAAATGCCAC TAAAATTTTCTGCTAGATTTAGAAGCACAATAAACTCCTCTAAATTGAGTTTATCTTCAAAGTGAGAAAGTGAGGGCATA TTCAATTTGGATTTTATGAGTTATGATTACAGTGCACTTTAAATTAAATCAGTGGTAATAGACTCCCACTTTCCCACTTT ACAGACAAACCTACTTTATATGAGCTTTTTCCCTCTACAGCTCATGTTAGGCCAGTATCTTCAAACATTTCTATTGAAAA TTCATTAGCACCTAAAACTAAAATTAAATTTTGTTGATTGCAGTTTTCGTAATCAATTATTCTAAATGATTTATTAACCA TGCTCAAGACTAATGTGGTGGTCAATTTATTTTCACTTGATATGCTGACTGTTACTGTGTTACACCTGGCTTGACCTAAT TTGCTGAAGTCGCATGTAGCTATGATTTTTTTATTTGATACCCTATGCTATATAAATCCTTGATCTGGCAAACCACAAGG ATTGCATGAGGTTATAGATTCAAATCCTATTGTCACTACTGTACACACAAAGAAGTCCTTGATCAAGTTTGTAAGGAATT GGTGTGTTTGACGTTTAGGAAGGATCTTCGTATGGCAGTCGAATGCTTTTGCATTAATGAAATGAGTGTCATTCTAATGA GGATATAAATGGATGAATTGACATCTTTTTGTTTGTTTAAATTTATGGTGATTTAAATTGATGCTTTAACTAATGTAAGA GTTGGCTCATACAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTAATATTTAAAAACCCAGTG TCAGTCACTGGAATGATGGGTTATGCGCTCACAGTCTTTGGAGTAATACTTTACAGTGAAGCCAAAAAGCGAAGCAAGTG A
CDS sequence (LotjaGi6g1v0069400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTTCGAGCCGTTTCTTCACGATTGGGCTTGTTGCAGCGTGGTACTCTTCCAACATTGGAGTGCTTCTGTTGAA TAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACTGCGTGCTCGTTGCTCA GCTATATTGCCATCGCGTGGATGAAGGTTGTGCCTATGCAGACCATTCGATCCAGGGTTCAATTCTTCAAGATCTCTGCG CTTAGTCTCATTTTCTGTGTCTCTGTGGTGTTTGGGAACATCTCGCTTCGGTATTTGCCTGTGTCTTTCAACCAGGCTAT TGGTGCTACCACGCCTTTCTTCACTGCGGTTTTTGCTTACATCATGACATTCAAGAGGGAGGCTTGGCTCACTTACCTGA CCCTTGTTCCTGTTGTTACTGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATAATATGTATTGCGGCTACAGCGGCA AGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTA CATGGCTCCAATGGCTGTGGTTTTTCTTCTTCCTGCCACACTTATAATGGAAGAAAATGTTGTTGGCATCACCTTGGCGC TCGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAATTCGACACTTGCGTATTTTGTCAACCTGACCAATTTT CTGGTCACGAAACATACCAGTGCTTTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAAT TCTAATATTTAAAAACCCAGTGTCAGTCACTGGAATGATGGGTTATGCGCTCACAGTCTTTGGAGTAATACTTTACAGTG AAGCCAAAAAGCGAAGCAAGTGA
Protein sequence (LotjaGi6g1v0069400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYIAIAWMKVVPMQTIRSRVQFFKISA LSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYIMTFKREAWLTYLTLVPVVTGGEPSFHLFGFIICIAATAA RALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNF LVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| PANTHER | 5 | 299 | 295 | 1.8E-174 | – | |
| PANTHER | 5 | 299 | 295 | 1.8E-174 | – | |
| Phobius | 6 | 26 | 21 | - | – | |
| Pfam | 12 | 293 | 282 | 3.9E-41 | ||
| Phobius | 27 | 37 | 11 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 38 | 61 | 24 | - | – | |
| Phobius | 62 | 72 | 11 | - | – | |
| Phobius | 73 | 94 | 22 | - | – | |
| TMHMM | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 106 | 124 | 19 | - | – | |
| Phobius | 125 | 143 | 19 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 144 | 163 | 20 | - | – | |
| Phobius | 164 | 183 | 20 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 184 | 201 | 18 | - | – | |
| SUPERFAMILY | 191 | 294 | 104 | 7.45E-6 | – | |
| Phobius | 202 | 220 | 19 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 221 | 242 | 22 | - | – | |
| Phobius | 243 | 248 | 6 | - | – | |
| TMHMM | 248 | 270 | 23 | - | – | |
| Phobius | 249 | 270 | 22 | - | – | |
| Phobius | 271 | 275 | 5 | - | – | |
| TMHMM | 274 | 293 | 20 | - | – | |
| Phobius | 276 | 293 | 18 | - | – | |
| Phobius | 294 | 300 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0069400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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