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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0070300 |
| Transcript ID | LotjaGi6g1v0070300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coronatine-insensitive 1; TAIR: AT2G39940.1 RNI-like superfamily protein; Swiss-Prot: sp|O04197|COI1_ARATH Coronatine-insensitive protein 1; TrEMBL-Plants: tr|Q45FY8|Q45FY8_SOYBN Coronatine-insensitive 1; Found in the gene: LotjaGi6g1v0070300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13376824..13380627) extracted from Lotus japonicus Gifu genome v1.2.
AACCAATACTATGAATCTCTCAACACTGAATGAATAACAGAACAGATCGATGATTATATTCCAAACGGTGACGTGTCGAA CGCCCTCACGCAACCACAACAACCAACTAGTTTTGTCGTTTCCGCCATTATCTTCTTTCCCTTCACAGCCCCTACCAATT CATCATCTTCATCAAAACCTCTTTTACCTATTTTTCAGGTTTATCAAATCAAGACCTAAAATAGTAATTTCCATTTCACT CTCCGATCCAATCCAAACCCTCCACTCGTTCCACCACCACCGGCCTCGGATTCCTTCCAGATAGATCTTTCTCGATTTCC GTCGCATCCATGGCGGCGGCGGCGGCGACGGAGGACCGGAGCGCGAGGCGCAACCGCCTCGTCGACGAGGTCCTGGACTG CGTCATCCCTTACATCGACGACCCTAAGGACCGTGACGCCGTGTCTCAGGTGTGTAAGTGCTGGTACGAGCTTGACTCGT TGACTCGGAAGCATGTGACGATTGCGCTCTGCTACACCACCACGCCGGCGAGGCTTCGACGCCGGTTCCCGCACCTGGAG TCGCTGAAGCTGAAGGGGAAGCCTCGGGCGGCGATGTTCAACTTGATTCCGGAGGATTGGGGTGGTCACGTTACGCCTTG GGTGTTGGAGATCAATCAGTACTTTGATTGCCTCAAGAGTCTCCACTTTCGCCGGATGATCGTCAAGGATAACGATCTTC TCCTTCTTGCTCAATCGCGTGGTCCTGTGCTGCACAGTCTTAAGCTTGATAAGTGTTGTGGGTTTTCCACTGATGGCCTT TTACATGTTAGTCGCTTCTGCAGGTACCTACCTAGCTTTTGCTTTAGTTGTTTTTGGCTATGTATGTTTGAACTTTGAAG CTTATTTTCTGATTTGAATAGTTTATATTTGAAGTAAAATTGGGTTTTCTTTAAAGATTGGTTAAGTTAACTTGATGGAT TAGCTTATTTTCTGCTTTGAACAGTTTACAATGAATGAATAAATAAACGATTTTTCTTTCATGATTAAGCAAAATCAATT GTCTCCATGGCGAGCTGTGTTAAGGTAATTTGGTTGACTACATGGAGAGACTGGTACATCTCTGGTGGAGTGATACTGAT AAGTGATTTTATACAATATAAATTAGTAGGGTTCAGTTAATTTAATGGTTTAACTTATGGATTAGCTTATTTTCAGCTAA CTAGCTTATTTTATACAATAAATTAAACGACGGTTTTTCTTTCAAGCATCCGCTTTGTGATCTTATTGAGGTAATTTGGT TGACTAGAAGAAGAGAGTGATAAATTTATGGTCGAGTGATTAATGATTGTGTGTGTATATATAATTTGGTTGAGGTAATT TAGTTACTTGTTTCTAGTTTCTCATTGCCAGTTGTTCTTTTTTCTTTGGCTAATCCTCTGTGCTTTTGTTTTTATGCTTC AGTTTCAATTGTCTAGTAGGAACTTTGGAGGCTTTTGTCTTATGCCACTCCTTAATAAATTGTGTTGGCCCTCTGCTCCT TATTATCTGTAACTGTTGAGGAATCCGGTGTTGTTTATCGCATCCTGTTGAAGAAGTAGCTATTTTGACTTCATTTTCGG CCCAGTGTTCCAAACTTCCAATTGCTTTGTAATTTCTCAAATATATTGTTATAACATTAAATGATTTGAAGTTTTGACCA TTGCACTGAATTGGCTTTTTTCATACTTGGAGTTTTGAATCCTCAAATTGATAGAATTTGTAGAAACACATAACTTCAAT GTTATTCTTCCCTTGATTTTCTGAATGAAGTTTTCTTTATTTGGTGGGGGGACAAACATATTTTAACTTTCAAGTACATT GACCTGACCTGAGCCATTGTTTTTTGGAAGTTATAATTCATGCCAGCAGCTATGAGTCATTGGGGCACTGACTATAAATT TTGCTTTTTGTCAGGAATTTAAGAGTACTACTTTTGGAGGAAAGCTCAATTGACGAGAAAGATGGTGAATGGCTACATGA GCTTGCTTTGAGCAATACAGTTCTTGAGTCTCTGAATTTTTACTTGACAGATGTTGCTGCTGTCAAAATTGAGGACCTTG AACTTTTAGCCAAAAATTGCCCGAACCTAGTTTCTGTGAAAATTACTGAATATGAAATTTCAAATCTTGTGAACTTCTTC CGGCAAGCATCTTCTCTGGAAGAATTTTGCGGAGGCATCTACAATGAGGAACCCGAAATATACTCTGCTGTATCATTACC AGCAAAGTTATGTCGATTGGGTTTAACATACATTGGAAAGAATGAGTTGCCGATGATGCTCATGTTCGCAGCTGCACTAA CAAAATTGGATCTCCTCTATGCCTTGCTGGATACAGATGATCATTGCATGTTGATCCAGAAGTGCCCAAATTTAGAAGTC CTTGAGGTAAATTGTAGAACATGTTTACTCATTAAAATTTCCAAATTTACCTGTGTACCTCTATTTATGTTATGGGTTCA GTTATGCACAAGATAAAGTCATGTGTCTTTTTTTAAAGTAGTCGAGTGATATTTATTAATGTTTGATATTGTTCATTCTT GTAATGGCTTGTATGATCTAAATTTTCTTCTCTTAACTTTGAAATGAAAACAGTCCTCTCATGTAGTACATTATATATAC ATATAGTCACACTCTTACCATGAATTGATATCTTCTCTTCTGGACAGACAAGAAATGTAATTGGAGATAGAGGATTAGAA GTTCTCGGTAGCTGTTGTAAGAGGCTAAAAAGACTTAGGATTGAACGTGGTGATGATGAAGGAGAAACAGTTTCCCATAG AGGATTAATTGCTTTATCAGAGGGCTGTTCAGAGCTTGAATATTTGGCTGTTTACGTTTCTGATATCACCAATGCATCCC TGGAACACATGGGCACTCACTTGAGAAACCTCTGCGATTTCCGTCTCGTGTTACTCGACCAAGAAGAGAAAATAACAGAT CTGCCACTCGACAGAGGAGTTCAAGCTTTGCTGAGGGGGTGCGACAAGCTTAAAAGATTCGCACTGTATCTGCGGCGAGG GGGGTTGACCGATGTAGGTCTCAGTTACATAGGGCAGTACAGCCAAAATGTGAGGTGGATGTTGTTGGGGGCTGTGGGGG AGACTGATGAAGGGCTTTTGGAGTTTGCGAAGGGATGCCCCAACCTTCAGAAACTTGAAATGAGAGGCTGTTCATTTTTC AGTGAGCATGCACTGGCTGTTGCTGCAACACAACTAACTTCTCTTAGGTACTTGTGGGTGCAAGGGTACGGTGCATCTCC TACCGGACGCGATCTTTTGGCAATGGCACGCCCCTTTTGGAACATTGAGTTAATTCCATCTAGAAGGGTGGTCGTTAATA ACAACATGGATGGGCCTGTGGTTTCTGTTCATCATCCAGCTCATATTCTTGCATATTACTCTCTTGCAGGCCAAAGATCA GATTTTCCAGATACTGTTGTACCTTTGGACCCTGCAACATTTGTTGAACCCTAGAATTGTGTAAATACTAATTTTTGTGT TTTTTTTTTCTTCTCCCCTCTCAAATCTTTGCTTGTAAGTTCCAGCTGTATTTGTAATTCAGGTTTCTCATTTTTCTCTG CAACTCCCTAGATTATAATAGTTTTGTAATAAGCCTTTGTCTTCATTTTGTAATTCAGAAATGCTACTGCCAACTCATGG ATTTTGTTCCCTCTAAACTGAAGGTTCTCTATTTTGTGAATAAGAATGAAATGAACCGATTGTGTAGATGTTATTATGTA TGTAGTTATTTCAATAAATATTTTGCTTATGTTTTTTTTAGATG
CDS sequence (LotjaGi6g1v0070300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGCGGCGGCGACGGAGGACCGGAGCGCGAGGCGCAACCGCCTCGTCGACGAGGTCCTGGACTGCGTCATCCC TTACATCGACGACCCTAAGGACCGTGACGCCGTGTCTCAGGTGTGTAAGTGCTGGTACGAGCTTGACTCGTTGACTCGGA AGCATGTGACGATTGCGCTCTGCTACACCACCACGCCGGCGAGGCTTCGACGCCGGTTCCCGCACCTGGAGTCGCTGAAG CTGAAGGGGAAGCCTCGGGCGGCGATGTTCAACTTGATTCCGGAGGATTGGGGTGGTCACGTTACGCCTTGGGTGTTGGA GATCAATCAGTACTTTGATTGCCTCAAGAGTCTCCACTTTCGCCGGATGATCGTCAAGGATAACGATCTTCTCCTTCTTG CTCAATCGCGTGGTCCTGTGCTGCACAGTCTTAAGCTTGATAAGTGTTGTGGGTTTTCCACTGATGGCCTTTTACATGTT AGTCGCTTCTGCAGGAATTTAAGAGTACTACTTTTGGAGGAAAGCTCAATTGACGAGAAAGATGGTGAATGGCTACATGA GCTTGCTTTGAGCAATACAGTTCTTGAGTCTCTGAATTTTTACTTGACAGATGTTGCTGCTGTCAAAATTGAGGACCTTG AACTTTTAGCCAAAAATTGCCCGAACCTAGTTTCTGTGAAAATTACTGAATATGAAATTTCAAATCTTGTGAACTTCTTC CGGCAAGCATCTTCTCTGGAAGAATTTTGCGGAGGCATCTACAATGAGGAACCCGAAATATACTCTGCTGTATCATTACC AGCAAAGTTATGTCGATTGGGTTTAACATACATTGGAAAGAATGAGTTGCCGATGATGCTCATGTTCGCAGCTGCACTAA CAAAATTGGATCTCCTCTATGCCTTGCTGGATACAGATGATCATTGCATGTTGATCCAGAAGTGCCCAAATTTAGAAGTC CTTGAGACAAGAAATGTAATTGGAGATAGAGGATTAGAAGTTCTCGGTAGCTGTTGTAAGAGGCTAAAAAGACTTAGGAT TGAACGTGGTGATGATGAAGGAGAAACAGTTTCCCATAGAGGATTAATTGCTTTATCAGAGGGCTGTTCAGAGCTTGAAT ATTTGGCTGTTTACGTTTCTGATATCACCAATGCATCCCTGGAACACATGGGCACTCACTTGAGAAACCTCTGCGATTTC CGTCTCGTGTTACTCGACCAAGAAGAGAAAATAACAGATCTGCCACTCGACAGAGGAGTTCAAGCTTTGCTGAGGGGGTG CGACAAGCTTAAAAGATTCGCACTGTATCTGCGGCGAGGGGGGTTGACCGATGTAGGTCTCAGTTACATAGGGCAGTACA GCCAAAATGTGAGGTGGATGTTGTTGGGGGCTGTGGGGGAGACTGATGAAGGGCTTTTGGAGTTTGCGAAGGGATGCCCC AACCTTCAGAAACTTGAAATGAGAGGCTGTTCATTTTTCAGTGAGCATGCACTGGCTGTTGCTGCAACACAACTAACTTC TCTTAGGTACTTGTGGGTGCAAGGGTACGGTGCATCTCCTACCGGACGCGATCTTTTGGCAATGGCACGCCCCTTTTGGA ACATTGAGTTAATTCCATCTAGAAGGGTGGTCGTTAATAACAACATGGATGGGCCTGTGGTTTCTGTTCATCATCCAGCT CATATTCTTGCATATTACTCTCTTGCAGGCCAAAGATCAGATTTTCCAGATACTGTTGTACCTTTGGACCCTGCAACATT TGTTGAACCCTAG
Protein sequence (LotjaGi6g1v0070300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAAATEDRSARRNRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLK LKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLAQSRGPVLHSLKLDKCCGFSTDGLLHV SRFCRNLRVLLLEESSIDEKDGEWLHELALSNTVLESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKITEYEISNLVNFF RQASSLEEFCGGIYNEEPEIYSAVSLPAKLCRLGLTYIGKNELPMMLMFAAALTKLDLLYALLDTDDHCMLIQKCPNLEV LETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDF RLVLLDQEEKITDLPLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKGCP NLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPSRRVVVNNNMDGPVVSVHHPA HILAYYSLAGQRSDFPDTVVPLDPATFVEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 7 | 53 | 47 | 1.8E-16 | – | |
| PANTHER | 16 | 584 | 569 | 4.8E-231 | – | |
| Pfam | 16 | 55 | 40 | 1.4E-20 | ||
| PANTHER | 16 | 584 | 569 | 4.8E-231 | – | |
| Gene3D | 54 | 586 | 533 | 1.1E-170 | ||
| Pfam | 74 | 120 | 47 | 1.6E-22 | ||
| SUPERFAMILY | 92 | 347 | 256 | 1.33E-17 | – | |
| SUPERFAMILY | 274 | 523 | 250 | 5.65E-20 | – | |
| SMART | 369 | 393 | 25 | 140.0 | ||
| SMART | 427 | 453 | 27 | 41.0 | ||
| SMART | 479 | 503 | 25 | 18.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0070300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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