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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0071400 |
| Transcript ID | LotjaGi6g1v0071400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exostosin-2; TAIR: AT3G55830.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9LY62|GT644_ARATH Glycosyltransferase family 64 protein C4; TrEMBL-Plants: tr|A0A0L9UW14|A0A0L9UW14_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0071400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13561168..13567236) extracted from Lotus japonicus Gifu genome v1.2.
CCGAACTTTCATCATTTTTCATGTCTCTCAGATTCGAAGAACGACGCTTCAACACACCAAAACACACAGCACTGCATTTT CAGTTTAACCGACTCATTAGAAACTCGTTTCTTCATTCCCTGCACCTCCGCCGCACCGGAACATTTCTCCCCGCTCGATG AACGGCGCGTCGTCGACTCGCTGCTGATACGGACGAGTCGACTCGGAGGGTTCGGCTTCGGCTTCCGCTTCCGCGACGAG TCCCCTCGGCGGTGATGAGAGGGAGCTGCTGCTTCTTCTTCAACCGTCGCACGGAGCAGAGGTTCCGCCTACTCGCGATC TCCACCGTCAAATCAGCGAGGAGGATCAATCTCTTGCTCTGCTTCTGCATTGCGTTAACGCTCCTCCTCCTCCTCCTCCT CCTCGCCGCCGCCAATTCTTCCACCACCGCCAACCGCTCTCGTCCTCATCCTCGCTTTCCTCTTTCCAGGTTCGTTAGCC GTTCCTTTTCGTAGTTAATTCATCAGTTCGTTGTTCTTGTTTTGGTAATAGGTTTCATCTTCCTCTTATTAGAAATTTTC AATTCTGTTAATTTTCGTTTCTTTTCCATTTTTGATTGAGTTATTATCTGGAGGGAAAATGGATAATTGAAGTCTTTTTT TGGAAATAAGTTGCATTAAATGATTGCTTAAAGTTGATTTTGGATTAGTTTCTAATCGTGCTTCTAATTCTGGAATTATA AGCAGCTGATTTTCTTGCTTTGAAGGTTATAGAAGTTATAATTGCTAGCATAATGAAGTTCATTTCTTCTATCAGTCATT TTGCTACTTACAATTTTATCTGAGTTCATTGTGGAGAGAAATGATAAGGGAAATCGATTCTGTTTGTGTGTTCAGTAAGG AGTGTTTGTTTATAAGGCTTGTTTCAGAACCACTTCATTGGCTTTTGATTTTCTTTAGTTCTATTGTTTACTCATGAACT AGAATTGGAGTACATAATTTTGGAGATGAATTATTGATGGGATTGCTATCTAAGTAATCTGCTATTTTGCATTAAAAGTT TATTGAAAAAATGCATAACCTCAGGGTTTAGATGGGTTTGCATAGATAACTGAGTTCATTGTTACAGTGGAACTGAACTC TGGACTCTGAATTGAGAATAATGTCACCACCTTCCAACTGTTAGATTATATTCAAAGTCCAATGTTAAATTAAAAATCCT TCAGTTGTAGCATTTATACGCTCACAGTAACTGACTTAAGACTTTGCTTGTTAGCATAATTGCCTTCAAAATCAGTATAG TTGGAGGTTATCTATTTGAGCATTTAGCTGGCCTTTTCCCCTGCTCTTTTCATGTTTGGTAAAATACGTGAGGCAGCCTG TTAAACCTTTCAATTGTAAATTTAATTTTCATAAATGGTTGTTGAGTGCATTTTCCTGTAAAATCTGATAACTCATATCA TTTGTATATTTCGTTCACAGGAAGGGGTATTCTATCGTAATGAACACATGGAAGAGATATGATCTCTTAAAGCAGTCCAT CACGCATTATTCATCATGTCCGCGACTTGAATCAGTACATATAGTGTGGAGCGAACCTGACCCTCCTTCTGATTTTCTTA TTAAATTTCTAAACCATGCAATAGAGTCTGAGTCAACAGATGGGCGACATGTCAAATTAAAATTTGACATCAACATGGAA GACAGTTTGAACAATAGGTTTAAAGAAGTAAAGGATTTGGAGACAGATGCTGTCTTTTCTATTGATGATGATGTCATATT TCCTTGCTCTTCGGTGGAATTTGCATTTGATGTTTGGCAAAGTGCACCAGATACAATGGTGGGATTTGTACCTCGTGTCC ATTGGTTGGATTCATCGGTAGGTTTTATATTTTTATCTACTTTTTTGCCATTTTTTGCCCATTATCGCAGATGATTTTCG TCCTTGACCCTTAATATTAATTGTTTACCATCCCAGATAATTTTGATTTTTTCCTTTTTATCAACCCATTGATTGTTTAT CTATCTTTTATGCCTATGCTTTTCGTGCCCCAACATGAGAAAAAGTATATAGGTAATTCAGGATGAAAAAAGTCAATCCT TCCTGATCTGTATTTCCCTCTTTTATTTCTTGTTCTTTTGTTTATCTTTTTACTGCAAAATCTTGTTATATAAGTAATAG CTTCCAACTGCCTAATATTACTTATGAAGTTCTAAACATTGAATTCAAACTTTTTGTGGAAAATTCAAGTATGATGCCAT TGAAAAATAAAAAGTAAACCTTGATTGCACTTTGGGGACCTGTTATTTTTATGTGTTGATCCAACCTTTCAAGAAATTCT TTTTTTTGTGTACTTCATGAATCTATAAATCTGGAAATGAACTTTCCGAGTTTAACCCTTGGCTGGAGGAATATTCAGAC TTCTTATTGCTGATCTTTCAAACTATTCAACCTTCTTTCAGGAAGGTGATGGCAATAAATTTAGATATGGGGGATGGTGG TCTGTGTGGTGGACGGGTACATATAGCATGGTGCTTTCCAAGGCAGCATTCTTCCATAAGAAGTATTTCAGTCTCTACAC AAATGAGATGCCAGCATCAATAAGAGAATATGTAACCACGAATAGGTTATTCTCTGAACTACCTAATCACTCACTATCTT CCTGTTTAACCTTTCAAACTAAATACATCTAACTTTTCTGTTATTTTCTTAATTCAATTGATTTACCAGGAATTGTGAGG ATATTGCAATGTCTTTCCTTGTTGCAAATGCCACTGATGCACCCCCAATATGGGTTAAAGGTAATTGGCATCTGAAACAC ATTCCTTAAATTTCGTTGAATTTTTTTCCCTATGCCCTCATTCACGTAAGTATTTCAACAAAGCCACAGCATGTAATAAG TTCACGGGAGATGCATCCCCCCTTCCCTCTTTAGCTTGTTGACTAAGTAAGCTCCTTATCTTTACTAGTTCAAAATGACC ATAAAATATCTTTTGTTAGGAGTGAAATGTGACATTTGTAACATTGATTCTGTTGTTGGGGAGCCAATAAATGATCTAAG GAAATGTTTTATTACTTCCCTAACAAACATGTTAAAAATGCAGATATGTGCCTTGTCATTCTCATCCCCCACTCTTCCCT CCCAGCCCTAGATTTCTGGAATCCAAGATGTTGTCAGTTGTTAATCCGCATTCTGTAATTGCTTTAGATAATCATTGGAA CAATTTGATAATATGCTTTGTATGTCACCACCATGTGCTTTAACCCAGGAGCAATGCTGGTATTTTTGAAATTGCTCTAT TATTATCATGCCAGTCCTGATTTTCAAGTAACCAATACAATGCTAAAATACTTTTGATGAGGTTTACATTATAATTAACA AATACAGATAGTGAAGTTCCACGATAATGCTTATGTTGCCTATTTATTGTAATTTATATTGCTCATTAACAATCTGATTC TCAGTTTCAAGAGACTTAAACCACTGCTTGTTATATGCCAGTCCTACTCCTATCTACACGCGCTTGTCAACTTCATTGAT TTTTTCATTATCACAGGTAAAATATTTGAGATTGGATCCACCGGAATCAGCAGCTTGGGAGGTCACAGTGAAAGAAGAAC AGAGTGTGTCAACAAATTTACTGCTGTATATGGACGGATGCCCTTGGTATCTACTTCAGTAAAGGCTGTTGATAGCCGCA ACATCTGGTTTTGGTGACGCCTGGATTTAGACATTTTTTGCAGGTTTTAGAAATTCCACGATCTTCAATTAGCTAGTTAA GCTACACGATTCTTCTTAGTTACACAGATGTATAATATTCACATAAAATTCATGTATTTTGATGGGATAGAGCTAATTAG CCACCTAGATTGATTTCTTGTATTCTTTGACATGTATTCCTGGGGTTATTTTTGTCTCACCATATAGAATTTCAGTGTAG AATCAGGGAATAGTAAACCCTCAGTCTAGAAACTCCTCCATATGATACTTGTGTTTAGTTGATGTACTGTCGTATTCTTC CTTCAACAACTTGCCTCTTTGGAATATATCAGTTCTCTGTGGATATATCTTTCTATGCACGTATTACATAAATGACTCTT CCAAAATTACTAACATGAGTCACAACTACCCAAGAAAAACCCAAAAAGATCAAGGGATAGAATTACAAGGTGAGTGAAAT GTCTGAGTAGGTCATGCCATGCTAGTATTACCAAGAAGTGTCAACTTGTATCTGATGGATTATGAGGGCTATTTTATGGT GGAAAGTTTATCAGGGGATTCAAGTGGAAAACAAGTATCTTTTCCACCAGTGCTCCAAAGGAAATTAGCATACTTCGATG CGTAATAAGTGTTTCTGGGTTCTTCTTCCAATGCTTCCTGGTATCTAAGTTCTGCTGCCTCAAGATCCTTTCTTACCAAC CACAGGAAATCAGCATATCGACTGAATGCCTCAGCATCTGGCGGCTCCTCCAGCACAGATCTCTTGAAGTACTCTTCTGC CCTGAAAACCCAAATTGAATTTTATAATAAGCAAACATAATATGCATGACTCAATCAGTGAATTGAGCTTGGAAGACCAT TTAAAGATAACTAGAATTCGCCAGAAAATTGACTTCTGAAAACTCACCCATCAAGGTCATGAACGACAAGATAAAGGAAC TGTGCATAGTTAGACAGCAGAAGAGAATTGTAAGGTGCCTGGCGTAAATGCTTTCTGTAATAAAGCCTTGTTTTGACATA TTCCTCATACTGATCCCCTTCAAGCTGAATAGATACTGGTGCCACAAACTTTAGCACTGTCTCATGGTCCAAAGCTTCAC TCTGCAATTCGTTTTGCCATCTTGAAGCTTCCTCCAGCATTGATTTCCACAACATTTCCTCATCTTCTGTCAACTCCTGC TTTCCAGATTCACCTTGTGAATGTTGTAGTAGTTTATTCCTATTATTAGTCATAACATTGTTGTCACACATCGAGAACAC TGAGAAATTGGCTAGGAGGACCATCACATTGACCATGAGATTCGGGCTTTTCCAAAATATATTCTGAAAGAGCCATACGA ATGAAACATCCAAATCTCCTTGCAACTTAGCCATGGCACCTTGCAAATCTTCACAGCAGAGAATCTCCCTTGTTTGCAAG ACATGGTTTTGAAGCTCGTGGATGATAAACAGCATGGAGGAGAAGACCCTCTTCACAGAACATGAAGTGAATTCACTTGC CTCTGTAAGACCCTTCTCCCATTGTAGCTTCTTCTTGATCATCCGAATGGATAAAGGAATTCCAACACTGTTCACTTTCC TTTCAAAGTTTAGCCTCAAGATTTCATCCCTTTCAGGCCAGCTCGGCGACTCGGGTTGAATACCCAGAAGAGAAGGATCT AGAACATCATGCTTCACTTCTGAGGAACCTATGTCAGATACTGCTGCATGAGCAATTTCCTTGTGCTTAGTTCCATGGTA GAACTCATCATTATAAGGGGCAAAGCAAGCTTGTTTCATAATATGCATCCTTAAATTCCTCGAGCGACAAAGGGCAGAAC CATGAATCAAAGGACATGTCATTCCACAGTTACTCTGAGTGCCATTTCCAAGTTGCAAAGAAGGAATAGGACAAGGTGAT TTATTGGAGTACTGACAAAGAGAGTAAGAGGAGTTTGGAGAGACTCTCGAGCCCATTTTTACATCACCAAGTTCTTCAAG GACTCAAAGAAATCATGTGTTACACTAACTAACAAGAACTCGTTAAACCATCCCAGGAATCTCGTACAAAGAAAGTGTTG AACTGTTGATCAAAGCTCCTTTTGCTGACCTCAAGAGTCTAATTAGATCTCTCAGCTTTTCATCAATATGGAAATTGAAA TTGGGAATGAAAAAGGCATCTCGTGTGTCAATAAAAGTATAAAAATCACAAACTTCAAAGTGATGTGCATGGAAGTAGCT AGATGTCCTATGGTTCAAGGAATATATAAATAGGAAATATTCGATGTAAGATTATTAAGCTCCTTCTGGCCAGGATGAAA GAAAAGAAACGATGAGTCACAAGTCTTTGTTTTTGCTTCATCAGAATTCTAGAGTGGTGTGTAGTGATA
CDS sequence (LotjaGi6g1v0071400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGGGAGCTGCTGCTTCTTCTTCAACCGTCGCACGGAGCAGAGGTTCCGCCTACTCGCGATCTCCACCGTCAAATC AGCGAGGAGGATCAATCTCTTGCTCTGCTTCTGCATTGCGTTAACGCTCCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCA ATTCTTCCACCACCGCCAACCGCTCTCGTCCTCATCCTCGCTTTCCTCTTTCCAGGAAGGGGTATTCTATCGTAATGAAC ACATGGAAGAGATATGATCTCTTAAAGCAGTCCATCACGCATTATTCATCATGTCCGCGACTTGAATCAGTACATATAGT GTGGAGCGAACCTGACCCTCCTTCTGATTTTCTTATTAAATTTCTAAACCATGCAATAGAGTCTGAGTCAACAGATGGGC GACATGTCAAATTAAAATTTGACATCAACATGGAAGACAGTTTGAACAATAGGTTTAAAGAAGTAAAGGATTTGGAGACA GATGCTGTCTTTTCTATTGATGATGATGTCATATTTCCTTGCTCTTCGGTGGAATTTGCATTTGATGTTTGGCAAAGTGC ACCAGATACAATGGTGGGATTTGTACCTCGTGTCCATTGGTTGGATTCATCGGAAGGTGATGGCAATAAATTTAGATATG GGGGATGGTGGTCTGTGTGGTGGACGGGTACATATAGCATGGTGCTTTCCAAGGCAGCATTCTTCCATAAGAAGTATTTC AGTCTCTACACAAATGAGATGCCAGCATCAATAAGAGAATATGTAACCACGAATAGGAATTGTGAGGATATTGCAATGTC TTTCCTTGTTGCAAATGCCACTGATGCACCCCCAATATGGGTTAAAGGTAAAATATTTGAGATTGGATCCACCGGAATCA GCAGCTTGGGAGGTCACAGTGAAAGAAGAACAGAGTGTGTCAACAAATTTACTGCTGTATATGGACGGATGCCCTTGGTA TCTACTTCAGTAAAGGCTGTTGATAGCCGCAACATCTGGTTTTGGTGA
Protein sequence (LotjaGi6g1v0071400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGSCCFFFNRRTEQRFRLLAISTVKSARRINLLLCFCIALTLLLLLLLLAAANSSTTANRSRPHPRFPLSRKGYSIVMN TWKRYDLLKQSITHYSSCPRLESVHIVWSEPDPPSDFLIKFLNHAIESESTDGRHVKLKFDINMEDSLNNRFKEVKDLET DAVFSIDDDVIFPCSSVEFAFDVWQSAPDTMVGFVPRVHWLDSSEGDGNKFRYGGWWSVWWTGTYSMVLSKAAFFHKKYF SLYTNEMPASIREYVTTNRNCEDIAMSFLVANATDAPPIWVKGKIFEIGSTGISSLGGHSERRTECVNKFTAVYGRMPLV STSVKAVDSRNIWFW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 55 | 55 | - | – | |
| PANTHER | 25 | 332 | 308 | 3.4E-118 | ||
| PANTHER | 25 | 332 | 308 | 3.4E-118 | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| Phobius | 33 | 51 | 19 | - | – | |
| Phobius | 52 | 55 | 4 | - | – | |
| Phobius | 56 | 335 | 280 | - | – | |
| Gene3D | 71 | 331 | 261 | 1.2E-91 | ||
| SUPERFAMILY | 73 | 324 | 252 | 2.63E-19 | ||
| Pfam | 75 | 326 | 252 | 1.2E-80 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi6g1v0071400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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