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LotjaGi6g1v0075900.1

Overview

Field Value
Gene ID LotjaGi6g1v0075900
Transcript ID LotjaGi6g1v0075900.1
Lotus japonicus genome version Gifu v1.2
Description Chaperone ClpB; TAIR: AT2G29970.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O80875|SMXL7_ARATH Protein SMAX1-LIKE 7; TrEMBL-Plants: tr|I1LMS2|I1LMS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0075900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:14418017..14423969) extracted from Lotus japonicus Gifu genome v1.2.

AAAAAACATAATCAAAGAAAAGTAAAATTCTGATTACACAAAACAAGTGTCATTAATTAGTAGGAGAGTTCATAAATTCT TCCCAACAACAACCCCACCCAGCAAGTTGTCTTCTTCTCCCTGGTTCTTCTCACCCATCACACACACACACACACACACA GTGTCACTCCACATTACAATTATTTATATAAGCTCTGCAAAATGCAAATTTACAAGTCCCCACTCCACTCTCCAACACAA AACCCCTTTTCCTAATTTATCAATCTTCCTCACAAAAAGGAAAACAAAAACCATTGTTTTTCCTTAACACGGATTTTTCA TCCTCCCAAATCAAAACCAACCTCCCTCAAAAAATTTCTCACTCACTTCCCATTTTTTCTTTTGCTTTTTTAATTTATTA TTATTATAATAATCATTATTATTTTCAATCTTTCTTTGGAGTGTTTATTTTATGAGCGCCGGCGACGATGCCAACGCCGG TAGGAGTAGCGAGGCAATGCTTAACAACGGAGGCGGGTCGAGCACTCGACGAGGCGGTGGCGGTAGCACGGCGGCGCGGC CACGCGCAGACAACGTCGCTCCACGCGGTGTCGGCGCTGCTATCCCTACCATCCTCGACGGTGCTCCGCGACGCGTGCTG CCGCGCGCGAAACTCAGCGTACTCTCCGCGTCTTCAGTTCAAGGCTCTCGACCTGTGCCTGTCGGTGTCGCTCGACCGCT CGCCGTCGTCGCACAACCACCACGTTTCCTCCGATCATGAACCGCCGGTGTCCAACTCGCTCATGGCCGCCATCAAACGC TCGCAGGCTAACCAGCGCCGCCACCCGGATAGCTTCTTCTACCACAGCAACCACCAGGTGCAGCAGCAGCAGCAGCAACC GTTTTCCGTTTCTTCAGTCAAGGTCGAGCTTCAGCACTTGATTCTGTCGATCCTTGATGACCCGGTTGTCAGCCGGGTCT TCGCGGAAGCGGGTTTCCGGAGCTCCGAGATCAAGCTCGCCATTCTCCGCCCTCTGCCGCATCTCATGAGGCCGCGCGGG CCGCCGGTTTTCCTCTGCGAGCGGCGGGGGTTCGGGTTTCCGTTTTTCTCAGGCTTCGGCGACGCCGGTGAGAATTTCCG GCGAATCGGTGAGGTGCTTGTACGGAGCAGGGGGAGGAATCCTCTGCTTCTCGGCGCGTGCGGCGGCTATGCTCTCCGGA GCTTTACGGAGGCGGTGGAGAGGAGAACGGACGGGGTGTTGCCGCTGGAGCTCACGGGGATGCGCGTGGTTTGCATTGGG AAGGAGGTGGAGAGTGGAGACGGCGAGGCCGTCGGTGCGAAGATGAAGGAGATCGCTGCTATGGCGGAGGAGTGTGTGGG GCCCGGTGTGGCGGTGAATTTTGGGGACTTAAAGGGTTTTGTGGGTGGTGATTCTGATGGGTGTGGTGGTTCTGGGGAAG ATGCTGTGAGGTTTGTTGTTGGGGAATTGGCTAAGTTGTTGAAGGTTCACTGTGACAGGTTTTGGTTGCTGGGTGCTGCT GCTAGCTATGAAAGCTACTTGAAATTTCTGGGTAGGTTCCCTTCAATAGAGAAAGACTGGGACTTGCAGTTTTTGCCTAT CACCTCTGTTAAGCCTTCTTCCATGGCTGCTGAATCATATCAAAGGCCCAGGTCAAGGTAAATCACCAAAATCTATGTTT TGCTTCCATATATACAAATTTTGTATTTTTATAAAGTTCTATTTCTTGAATTTTGAGTAAATCTTTAGTTTTATATTCTC TAATGATTTCCACATCCATTAAATTAGTAACTAATATGAACAAATCACATATCTGGTGATGATGTCAGTCATATTGGTTG GACTAAAAAAAACCCCATATCAGATACTAATATGGCCAATATCATCATACTTTAGGTTTTTAAGTATCTAATTTCTCTAG ATTAGAGACTAATTTAATAGACATGAAAAAAAGTGAAGATGTAATTTGGGAATTACACCTTGAGAACTTTGGTATGAAAT GTTTGTGACATGCGTGTGACCCGTGTATGTTTATTATTTTTTTATGTGTATAAAGTTTTGAAGCTCAGGCGCCAACTTAA TATATATTTATGATAAGTTTATTCATTTAATTTGCTTTTTTTCTTTGGGATTCTTTCATAAGCGAGACTTGGTTAATTTG AATTAAGGGCATGTTTGGAAACTCGTTTGAAAGCCAAAATCGTGGTGGACATAAGCAACTTGCCTTAGCTTTTGCTGCTA TCCACCTTGATTTTGACTTCACCATTGTGTTCGAAGTTCGAACGAGATTTGATATACTTTCTATTGAATTATTATTGGCA TGAATATGAAGCAACAACCTTCCTAATGGTTCCTCCTTCAATACCTGCCTTATTTTCGCAACTTGAGTTTTGATGAGAGC CATTTACACTTTGTGATTCCATTGCGGGTCTTTCCAGCCATCACATGTACTAGTAAATTGTCTTCTTAGTAATTAACGTG CTGATATTTGAAAGCACACAGTTAGGTTGTTCTGTGCCAAACTAAGTGGTGCTATGATGATCACTTATTTTGTTATTATG ACTGACAAATGGGATGTGAACTTTGTATCTTTCTTGTAGTAGTTAGTTATGGATGAGTTTTGTCTAAAGCCTCCTTTTTT ACAGCTTAATGGATTCATTTGTACCATTTGGTGGCTTTTTTCCATCAAAGTCTGATTTGAAAAGTCCATTAAATGGCTCA TCTTGTTGTCTTCCTCATTGTCATCAATATGGTGAGAAGTGTGAACATGAAGTCTTTTCTGCTTCCGTGGCTGATCCCTA CCAATCTAGCTTACCTCCATGGTTGCAGATTACAGAATTTGGCACAGCAAAGGGATTGAATGTCAAGGTGCGTAGAATTC AGATACATCATTAATTTTGGTATAAATTATTTGTGTAGAGATGGGAAATAAATTTGTTTCTGTGTGAGGTTATATGCAAA TACTAAAATGGAGAATATTAAATGAAGCTAGATTTCAGGTCAAGGTATGGGCCTTGAAGAGCAATCTTTTTCATGACAAA ATGGAGAGGGACCTATTTCTACTGCGATTCTTGATTTTCAAAGGGTTGTTTGGCAGTTTGGCTTACTAATTATATATATC TTTTTATCCTTTTCCCCCTAAAACTGGGCCCCTTTAGTAAACAATAAGCATGTGCAATTCTTGAAATGGCAAAAGCTTTT CTTTGCCTATAAAGGTATAAAAAGTTTTGCCTGCTCTTTTTATTTGTCTTGACATATGTGGTCCTAGAACTTTTAACGGC AGATCACTGAAAAATAAAAATTGAAATGTTGGTTTTTGTTCCAAAGATGCTATGAGTCTATGACAAGTTATAATAAACAG TAACAATTTTTTCTCCACTGTAGTGGTGAATAACTTTAAAAAAAAAATCATGGATGAAATGTTTAAAATGGGTTGGCACT TAACAAACGTGTGCCTTTGGTGATTGATAATTATTGCACATCAACAAGTTTTTGTGGGTTAATACAACTTTCAGATTCTG TCTTTACTTACTTATCTGTAAAATCAATTGGTTCGCATTAACAAGTGCAACCTTGCATATTACAAAATATTCTATTTGCT CTGGTCCACTTATAGTAGTTAGTAAATTAGCAATTCATGAACAAACGGTCATGATGTATATAAGATATCCCTCAAGATCA TTTTTTCAATGTTTAGTTGTAATTTTGTTGATTGTTTAGTAAATCACGTACAATCGATTTATGCCTTATCAATGAAGTCC TCTACTCCTCTTCATTATGTTTGTGTAAAAACCACTTTTCTTTCATTCAGTGCAGACCAAAGATGATGGTGTTTTGCTGG ATAGTAGCGAATCTGGACCACCACAGAAGAACTTGGACAAGACATGCCGGCAGCTGCACCAGCGAATTCCGGTGTCAAAT ACCTGTCCAATCGTCATCGGGTTTCATTGTACTGACAACAAAAAGGAAGATGCTGAGAACTGCCGCAGCAAAATTACAGA CAAATCACCTAGTGAACATGTCAATCTCAACTCCCATGTACCTGTTGGTGTGAAAATGATGTGTGCATCGCAATCCAGCA GTTCTTTTCCTGTGATTTTCATGGCAAAACAGGCGAAATATACTTCAAAACTTCCAGAGATGCTCCAGAAAGTGGAAGAT CTTGAGTCCGGTGACCTAAGATCATGCAACATGTCCAGTTCAAGTGTGTCTGATGGCAGTCAACTATCTCCCACATCTGT GACTTCAGTAACAACAGATCTAGGCTTAGGGCCATGCTCTTCTCCCACCAGCAATAAATCGAAGAAACTAACTTTTCAAT ATACAATGGAGCCTCCAAAAGAAATCCCAAATCACATATCTTCAGATTTCAATTTGACTGATGGGAGTATTTGGAAGCAT CAATCGCAGTCTACATCCTGCTTAAGTTTCGACCATTATCGAGAAGTTGATGCAAAAAATCCCAAAACTCTTTTTGAAGC TCTTTCCAAGGAGGTAAGCTGGCAAAACGAAGCCTTGCGAGCTATCATCAAAACAATAGTTTGCAGCCCAACAGAAAGGG TTAAACATCATGGATCAAATCAGCGCCGTGATATATGGATGAGTTTTGTCGGACCTGATAGGCATGGTAAAAAGAAAATT GCTGTTTCTCTTGCTAAGATATTGTATGGAAGCCGCGAGAGCTTCATTTTTGTGGATCTGGGCTCTGAAGAAATGAAAGG ATGCAATGTCAAATTCATAGGAAAGACTACCATTGATTTTATTGTGAGGGAGTATTGCCAGAAACCTTTGTCTGTGGTTT TCCTGGAAAATGTTGACAAGGCGGATATGGTTGTTCAAAGTAGTTTGTCTCAAGCCATCAGGACAGGAAAAATCACAGAT TCTCATGGACGAGAAGTGAGTGTAAACAATGCAATTTTTGTGTTTTCTTTCTCAGGTCACCAAGGTTGTTCCTTTCCAAC AAGGGAATCCTCCAACTATTCTGAGGAAAGAATACTCAGGGCAAAAGGGGGAGGTATCAAGATTAAAGTTGAAAATGCGA TTGGGGACATGAGAAGCCAAAGCATCAGTGCAGCTAACTGTTCAATAGATGCCATTCCTGATCTAAATTTCATAAACAAA CGAAAGTTGATTGCCGACAATGAATTTTGCGATCCAGAGACGCCTAAAAGGGCACATACAACATCAAATTGGCTTCTAGA TTTGAATCTTCCAGCTGAAGAGGATGAACATAAACAATCAGATGATGGAAACTCTGAACTTGGCTCCACTGAGAACCAAC ACCTTTGGTTGCAAGGTTTGTACAATCAGGTTGATGAAACAATTTCCTTTGAACCTTATGATTTTGACGCACTTGCGGAT AGAGTGTTTAAAGTGATCAAAATTAACTTCAACAAGATTCTTGGATCCGAGTTTAACTTAGAGATCCAGGGAGAAGTCAT GGAGCAATTGCTTGCAGCTGCATATCTCTCAGACAGGGATATGGAGGTGGAGAATTGGGTGGAGCAAGTTCTCTGTGGAG GATTCACAGAAGCACAGAGAAGATATAACCTCAATGCTAGTTCTATTGTGAAACTTGCTTCATGTACAGCTCCAAGTGTG CACCTTCCTCCAAGGATAATTGTAGAATGAGTCCCTACTTGAAACTGTCTTCTATCTGGATGTATAATTTAGCTGTAGCA TATAGTGAAGCTATTTTGGCCTTCAATCCTATGGTTTTGTTGGGTTTCTTTGTCTAGGTTGTAGTTGTGTATAATATGTT ATCTGCAGCTAGTGCTGTGCGTGATTATCCTTGCATATTTAAATCAAAGTGCTGTCTTCGTTTATATGTTGCTGCTTGCT GTAATTGATAAGTACATACAGCGATAAATTGATTTAGACCCATAAACAAGAGCTGTATAAGTTTATTGGTTAAATTAAGA ATACATTTTCAATCAAGAGATGCTCCTTTTTTT 

CDS sequence (LotjaGi6g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCAACGCCGGTAGGAGTAGCGAGGCAATGCTTAACAACGGAGGCGGGTCGAGCACTCGACGAGGCGGTGGCGGTAGC ACGGCGGCGCGGCCACGCGCAGACAACGTCGCTCCACGCGGTGTCGGCGCTGCTATCCCTACCATCCTCGACGGTGCTCC GCGACGCGTGCTGCCGCGCGCGAAACTCAGCGTACTCTCCGCGTCTTCAGTTCAAGGCTCTCGACCTGTGCCTGTCGGTG TCGCTCGACCGCTCGCCGTCGTCGCACAACCACCACGTTTCCTCCGATCATGAACCGCCGGTGTCCAACTCGCTCATGGC CGCCATCAAACGCTCGCAGGCTAACCAGCGCCGCCACCCGGATAGCTTCTTCTACCACAGCAACCACCAGGTGCAGCAGC AGCAGCAGCAACCGTTTTCCGTTTCTTCAGTCAAGGTCGAGCTTCAGCACTTGATTCTGTCGATCCTTGATGACCCGGTT GTCAGCCGGGTCTTCGCGGAAGCGGGTTTCCGGAGCTCCGAGATCAAGCTCGCCATTCTCCGCCCTCTGCCGCATCTCAT GAGGCCGCGCGGGCCGCCGGTTTTCCTCTGCGAGCGGCGGGGGTTCGGGTTTCCGTTTTTCTCAGGCTTCGGCGACGCCG GTGAGAATTTCCGGCGAATCGGTGAGGTGCTTGTACGGAGCAGGGGGAGGAATCCTCTGCTTCTCGGCGCGTGCGGCGGC TATGCTCTCCGGAGCTTTACGGAGGCGGTGGAGAGGAGAACGGACGGGGTGTTGCCGCTGGAGCTCACGGGGATGCGCGT GGTTTGCATTGGGAAGGAGGTGGAGAGTGGAGACGGCGAGGCCGTCGGTGCGAAGATGAAGGAGATCGCTGCTATGGCGG AGGAGTGTGTGGGGCCCGGTGTGGCGGTGAATTTTGGGGACTTAAAGGGTTTTGTGGGTGGTGATTCTGATGGGTGTGGT GGTTCTGGGGAAGATGCTGTGAGGTTTGTTGTTGGGGAATTGGCTAAGTTGTTGAAGGTTCACTGTGACAGGTTTTGGTT GCTGGGTGCTGCTGCTAGCTATGAAAGCTACTTGAAATTTCTGGGTAGGTTCCCTTCAATAGAGAAAGACTGGGACTTGC AGTTTTTGCCTATCACCTCTGTTAAGCCTTCTTCCATGGCTGCTGAATCATATCAAAGGCCCAGGTCAAGCTTAATGGAT TCATTTGTACCATTTGGTGGCTTTTTTCCATCAAAGTCTGATTTGAAAAGTCCATTAAATGGCTCATCTTGTTGTCTTCC TCATTGTCATCAATATGGTGAGAAGTGTGAACATGAAGTCTTTTCTGCTTCCGTGGCTGATCCCTACCAATCTAGCTTAC CTCCATGGTTGCAGATTACAGAATTTGGCACAGCAAAGGGATTGAATGTCAAGACCAAAGATGATGGTGTTTTGCTGGAT AGTAGCGAATCTGGACCACCACAGAAGAACTTGGACAAGACATGCCGGCAGCTGCACCAGCGAATTCCGGTGTCAAATAC CTGTCCAATCGTCATCGGGTTTCATTGTACTGACAACAAAAAGGAAGATGCTGAGAACTGCCGCAGCAAAATTACAGACA AATCACCTAGTGAACATGTCAATCTCAACTCCCATGTACCTGTTGGTGTGAAAATGATGTGTGCATCGCAATCCAGCAGT TCTTTTCCTGTGATTTTCATGGCAAAACAGGCGAAATATACTTCAAAACTTCCAGAGATGCTCCAGAAAGTGGAAGATCT TGAGTCCGGTGACCTAAGATCATGCAACATGTCCAGTTCAAGTGTGTCTGATGGCAGTCAACTATCTCCCACATCTGTGA CTTCAGTAACAACAGATCTAGGCTTAGGGCCATGCTCTTCTCCCACCAGCAATAAATCGAAGAAACTAACTTTTCAATAT ACAATGGAGCCTCCAAAAGAAATCCCAAATCACATATCTTCAGATTTCAATTTGACTGATGGGAGTATTTGGAAGCATCA ATCGCAGTCTACATCCTGCTTAAGTTTCGACCATTATCGAGAAGTTGATGCAAAAAATCCCAAAACTCTTTTTGAAGCTC TTTCCAAGGAGGTAAGCTGGCAAAACGAAGCCTTGCGAGCTATCATCAAAACAATAGTTTGCAGCCCAACAGAAAGGGTT AAACATCATGGATCAAATCAGCGCCGTGATATATGGATGAGTTTTGTCGGACCTGATAGGCATGGTAAAAAGAAAATTGC TGTTTCTCTTGCTAAGATATTGTATGGAAGCCGCGAGAGCTTCATTTTTGTGGATCTGGGCTCTGAAGAAATGAAAGGAT GCAATGTCAAATTCATAGGAAAGACTACCATTGATTTTATTGTGAGGGAGTATTGCCAGAAACCTTTGTCTGTGGTTTTC CTGGAAAATGTTGACAAGGCGGATATGGTTGTTCAAAGTAGTTTGTCTCAAGCCATCAGGACAGGAAAAATCACAGATTC TCATGGACGAGAAGTGAGTGTAAACAATGCAATTTTTGTGTTTTCTTTCTCAGGTCACCAAGGTTGTTCCTTTCCAACAA GGGAATCCTCCAACTATTCTGAGGAAAGAATACTCAGGGCAAAAGGGGGAGGTATCAAGATTAAAGTTGAAAATGCGATT GGGGACATGAGAAGCCAAAGCATCAGTGCAGCTAACTGTTCAATAGATGCCATTCCTGATCTAAATTTCATAAACAAACG AAAGTTGATTGCCGACAATGAATTTTGCGATCCAGAGACGCCTAAAAGGGCACATACAACATCAAATTGGCTTCTAGATT TGAATCTTCCAGCTGAAGAGGATGAACATAAACAATCAGATGATGGAAACTCTGAACTTGGCTCCACTGAGAACCAACAC CTTTGGTTGCAAGGTTTGTACAATCAGGTTGATGAAACAATTTCCTTTGAACCTTATGATTTTGACGCACTTGCGGATAG AGTGTTTAAAGTGATCAAAATTAACTTCAACAAGATTCTTGGATCCGAGTTTAACTTAGAGATCCAGGGAGAAGTCATGG AGCAATTGCTTGCAGCTGCATATCTCTCAGACAGGGATATGGAGGTGGAGAATTGGGTGGAGCAAGTTCTCTGTGGAGGA TTCACAGAAGCACAGAGAAGATATAACCTCAATGCTAGTTCTATTGTGAAACTTGCTTCATGTACAGCTCCAAGTGTGCA CCTTCCTCCAAGGATAATTGTAGAATGA 

Protein sequence (LotjaGi6g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPTPVGVARQCLTTEAGRALDEAVAVARRRGHAQTTSLHAVSALLSLPSSTVLRDACCRARNSAYSPRLQFKALDLCLSV SLDRSPSSHNHHVSSDHEPPVSNSLMAAIKRSQANQRRHPDSFFYHSNHQVQQQQQQPFSVSSVKVELQHLILSILDDPV VSRVFAEAGFRSSEIKLAILRPLPHLMRPRGPPVFLCERRGFGFPFFSGFGDAGENFRRIGEVLVRSRGRNPLLLGACGG YALRSFTEAVERRTDGVLPLELTGMRVVCIGKEVESGDGEAVGAKMKEIAAMAEECVGPGVAVNFGDLKGFVGGDSDGCG GSGEDAVRFVVGELAKLLKVHCDRFWLLGAAASYESYLKFLGRFPSIEKDWDLQFLPITSVKPSSMAAESYQRPRSSLMD SFVPFGGFFPSKSDLKSPLNGSSCCLPHCHQYGEKCEHEVFSASVADPYQSSLPPWLQITEFGTAKGLNVKTKDDGVLLD SSESGPPQKNLDKTCRQLHQRIPVSNTCPIVIGFHCTDNKKEDAENCRSKITDKSPSEHVNLNSHVPVGVKMMCASQSSS SFPVIFMAKQAKYTSKLPEMLQKVEDLESGDLRSCNMSSSSVSDGSQLSPTSVTSVTTDLGLGPCSSPTSNKSKKLTFQY TMEPPKEIPNHISSDFNLTDGSIWKHQSQSTSCLSFDHYREVDAKNPKTLFEALSKEVSWQNEALRAIIKTIVCSPTERV KHHGSNQRRDIWMSFVGPDRHGKKKIAVSLAKILYGSRESFIFVDLGSEEMKGCNVKFIGKTTIDFIVREYCQKPLSVVF LENVDKADMVVQSSLSQAIRTGKITDSHGREVSVNNAIFVFSFSGHQGCSFPTRESSNYSEERILRAKGGGIKIKVENAI GDMRSQSISAANCSIDAIPDLNFINKRKLIADNEFCDPETPKRAHTTSNWLLDLNLPAEEDEHKQSDDGNSELGSTENQH LWLQGLYNQVDETISFEPYDFDALADRVFKVIKINFNKILGSEFNLEIQGEVMEQLLAAAYLSDRDMEVENWVEQVLCGG FTEAQRRYNLNASSIVKLASCTAPSVHLPPRIIVE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1066 1066 0.0
PANTHER 1 1066 1066 0.0
ProSiteProfiles 8 185 178 26.543
Gene3D 10 182 173 4.8E-37
MobiDBLite 595 632 38 -
Gene3D 657 880 224 4.5E-26
SUPERFAMILY 682 1020 339 6.2E-15
Pfam 733 842 110 7.4E-7

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein metabolic process The chemical reactions and pathways involving a protein. Includes protein modification.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0075900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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