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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0075900 |
Transcript ID | LotjaGi6g1v0075900.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Chaperone ClpB; TAIR: AT2G29970.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O80875|SMXL7_ARATH Protein SMAX1-LIKE 7; TrEMBL-Plants: tr|I1LMS2|I1LMS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0075900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:14418017..14423969) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACATAATCAAAGAAAAGTAAAATTCTGATTACACAAAACAAGTGTCATTAATTAGTAGGAGAGTTCATAAATTCT TCCCAACAACAACCCCACCCAGCAAGTTGTCTTCTTCTCCCTGGTTCTTCTCACCCATCACACACACACACACACACACA GTGTCACTCCACATTACAATTATTTATATAAGCTCTGCAAAATGCAAATTTACAAGTCCCCACTCCACTCTCCAACACAA AACCCCTTTTCCTAATTTATCAATCTTCCTCACAAAAAGGAAAACAAAAACCATTGTTTTTCCTTAACACGGATTTTTCA TCCTCCCAAATCAAAACCAACCTCCCTCAAAAAATTTCTCACTCACTTCCCATTTTTTCTTTTGCTTTTTTAATTTATTA TTATTATAATAATCATTATTATTTTCAATCTTTCTTTGGAGTGTTTATTTTATGAGCGCCGGCGACGATGCCAACGCCGG TAGGAGTAGCGAGGCAATGCTTAACAACGGAGGCGGGTCGAGCACTCGACGAGGCGGTGGCGGTAGCACGGCGGCGCGGC CACGCGCAGACAACGTCGCTCCACGCGGTGTCGGCGCTGCTATCCCTACCATCCTCGACGGTGCTCCGCGACGCGTGCTG CCGCGCGCGAAACTCAGCGTACTCTCCGCGTCTTCAGTTCAAGGCTCTCGACCTGTGCCTGTCGGTGTCGCTCGACCGCT CGCCGTCGTCGCACAACCACCACGTTTCCTCCGATCATGAACCGCCGGTGTCCAACTCGCTCATGGCCGCCATCAAACGC TCGCAGGCTAACCAGCGCCGCCACCCGGATAGCTTCTTCTACCACAGCAACCACCAGGTGCAGCAGCAGCAGCAGCAACC GTTTTCCGTTTCTTCAGTCAAGGTCGAGCTTCAGCACTTGATTCTGTCGATCCTTGATGACCCGGTTGTCAGCCGGGTCT TCGCGGAAGCGGGTTTCCGGAGCTCCGAGATCAAGCTCGCCATTCTCCGCCCTCTGCCGCATCTCATGAGGCCGCGCGGG CCGCCGGTTTTCCTCTGCGAGCGGCGGGGGTTCGGGTTTCCGTTTTTCTCAGGCTTCGGCGACGCCGGTGAGAATTTCCG GCGAATCGGTGAGGTGCTTGTACGGAGCAGGGGGAGGAATCCTCTGCTTCTCGGCGCGTGCGGCGGCTATGCTCTCCGGA GCTTTACGGAGGCGGTGGAGAGGAGAACGGACGGGGTGTTGCCGCTGGAGCTCACGGGGATGCGCGTGGTTTGCATTGGG AAGGAGGTGGAGAGTGGAGACGGCGAGGCCGTCGGTGCGAAGATGAAGGAGATCGCTGCTATGGCGGAGGAGTGTGTGGG GCCCGGTGTGGCGGTGAATTTTGGGGACTTAAAGGGTTTTGTGGGTGGTGATTCTGATGGGTGTGGTGGTTCTGGGGAAG ATGCTGTGAGGTTTGTTGTTGGGGAATTGGCTAAGTTGTTGAAGGTTCACTGTGACAGGTTTTGGTTGCTGGGTGCTGCT GCTAGCTATGAAAGCTACTTGAAATTTCTGGGTAGGTTCCCTTCAATAGAGAAAGACTGGGACTTGCAGTTTTTGCCTAT CACCTCTGTTAAGCCTTCTTCCATGGCTGCTGAATCATATCAAAGGCCCAGGTCAAGGTAAATCACCAAAATCTATGTTT TGCTTCCATATATACAAATTTTGTATTTTTATAAAGTTCTATTTCTTGAATTTTGAGTAAATCTTTAGTTTTATATTCTC TAATGATTTCCACATCCATTAAATTAGTAACTAATATGAACAAATCACATATCTGGTGATGATGTCAGTCATATTGGTTG GACTAAAAAAAACCCCATATCAGATACTAATATGGCCAATATCATCATACTTTAGGTTTTTAAGTATCTAATTTCTCTAG ATTAGAGACTAATTTAATAGACATGAAAAAAAGTGAAGATGTAATTTGGGAATTACACCTTGAGAACTTTGGTATGAAAT GTTTGTGACATGCGTGTGACCCGTGTATGTTTATTATTTTTTTATGTGTATAAAGTTTTGAAGCTCAGGCGCCAACTTAA TATATATTTATGATAAGTTTATTCATTTAATTTGCTTTTTTTCTTTGGGATTCTTTCATAAGCGAGACTTGGTTAATTTG AATTAAGGGCATGTTTGGAAACTCGTTTGAAAGCCAAAATCGTGGTGGACATAAGCAACTTGCCTTAGCTTTTGCTGCTA TCCACCTTGATTTTGACTTCACCATTGTGTTCGAAGTTCGAACGAGATTTGATATACTTTCTATTGAATTATTATTGGCA TGAATATGAAGCAACAACCTTCCTAATGGTTCCTCCTTCAATACCTGCCTTATTTTCGCAACTTGAGTTTTGATGAGAGC CATTTACACTTTGTGATTCCATTGCGGGTCTTTCCAGCCATCACATGTACTAGTAAATTGTCTTCTTAGTAATTAACGTG CTGATATTTGAAAGCACACAGTTAGGTTGTTCTGTGCCAAACTAAGTGGTGCTATGATGATCACTTATTTTGTTATTATG ACTGACAAATGGGATGTGAACTTTGTATCTTTCTTGTAGTAGTTAGTTATGGATGAGTTTTGTCTAAAGCCTCCTTTTTT ACAGCTTAATGGATTCATTTGTACCATTTGGTGGCTTTTTTCCATCAAAGTCTGATTTGAAAAGTCCATTAAATGGCTCA TCTTGTTGTCTTCCTCATTGTCATCAATATGGTGAGAAGTGTGAACATGAAGTCTTTTCTGCTTCCGTGGCTGATCCCTA CCAATCTAGCTTACCTCCATGGTTGCAGATTACAGAATTTGGCACAGCAAAGGGATTGAATGTCAAGGTGCGTAGAATTC AGATACATCATTAATTTTGGTATAAATTATTTGTGTAGAGATGGGAAATAAATTTGTTTCTGTGTGAGGTTATATGCAAA TACTAAAATGGAGAATATTAAATGAAGCTAGATTTCAGGTCAAGGTATGGGCCTTGAAGAGCAATCTTTTTCATGACAAA ATGGAGAGGGACCTATTTCTACTGCGATTCTTGATTTTCAAAGGGTTGTTTGGCAGTTTGGCTTACTAATTATATATATC TTTTTATCCTTTTCCCCCTAAAACTGGGCCCCTTTAGTAAACAATAAGCATGTGCAATTCTTGAAATGGCAAAAGCTTTT CTTTGCCTATAAAGGTATAAAAAGTTTTGCCTGCTCTTTTTATTTGTCTTGACATATGTGGTCCTAGAACTTTTAACGGC AGATCACTGAAAAATAAAAATTGAAATGTTGGTTTTTGTTCCAAAGATGCTATGAGTCTATGACAAGTTATAATAAACAG TAACAATTTTTTCTCCACTGTAGTGGTGAATAACTTTAAAAAAAAAATCATGGATGAAATGTTTAAAATGGGTTGGCACT TAACAAACGTGTGCCTTTGGTGATTGATAATTATTGCACATCAACAAGTTTTTGTGGGTTAATACAACTTTCAGATTCTG TCTTTACTTACTTATCTGTAAAATCAATTGGTTCGCATTAACAAGTGCAACCTTGCATATTACAAAATATTCTATTTGCT CTGGTCCACTTATAGTAGTTAGTAAATTAGCAATTCATGAACAAACGGTCATGATGTATATAAGATATCCCTCAAGATCA TTTTTTCAATGTTTAGTTGTAATTTTGTTGATTGTTTAGTAAATCACGTACAATCGATTTATGCCTTATCAATGAAGTCC TCTACTCCTCTTCATTATGTTTGTGTAAAAACCACTTTTCTTTCATTCAGTGCAGACCAAAGATGATGGTGTTTTGCTGG ATAGTAGCGAATCTGGACCACCACAGAAGAACTTGGACAAGACATGCCGGCAGCTGCACCAGCGAATTCCGGTGTCAAAT ACCTGTCCAATCGTCATCGGGTTTCATTGTACTGACAACAAAAAGGAAGATGCTGAGAACTGCCGCAGCAAAATTACAGA CAAATCACCTAGTGAACATGTCAATCTCAACTCCCATGTACCTGTTGGTGTGAAAATGATGTGTGCATCGCAATCCAGCA GTTCTTTTCCTGTGATTTTCATGGCAAAACAGGCGAAATATACTTCAAAACTTCCAGAGATGCTCCAGAAAGTGGAAGAT CTTGAGTCCGGTGACCTAAGATCATGCAACATGTCCAGTTCAAGTGTGTCTGATGGCAGTCAACTATCTCCCACATCTGT GACTTCAGTAACAACAGATCTAGGCTTAGGGCCATGCTCTTCTCCCACCAGCAATAAATCGAAGAAACTAACTTTTCAAT ATACAATGGAGCCTCCAAAAGAAATCCCAAATCACATATCTTCAGATTTCAATTTGACTGATGGGAGTATTTGGAAGCAT CAATCGCAGTCTACATCCTGCTTAAGTTTCGACCATTATCGAGAAGTTGATGCAAAAAATCCCAAAACTCTTTTTGAAGC TCTTTCCAAGGAGGTAAGCTGGCAAAACGAAGCCTTGCGAGCTATCATCAAAACAATAGTTTGCAGCCCAACAGAAAGGG TTAAACATCATGGATCAAATCAGCGCCGTGATATATGGATGAGTTTTGTCGGACCTGATAGGCATGGTAAAAAGAAAATT GCTGTTTCTCTTGCTAAGATATTGTATGGAAGCCGCGAGAGCTTCATTTTTGTGGATCTGGGCTCTGAAGAAATGAAAGG ATGCAATGTCAAATTCATAGGAAAGACTACCATTGATTTTATTGTGAGGGAGTATTGCCAGAAACCTTTGTCTGTGGTTT TCCTGGAAAATGTTGACAAGGCGGATATGGTTGTTCAAAGTAGTTTGTCTCAAGCCATCAGGACAGGAAAAATCACAGAT TCTCATGGACGAGAAGTGAGTGTAAACAATGCAATTTTTGTGTTTTCTTTCTCAGGTCACCAAGGTTGTTCCTTTCCAAC AAGGGAATCCTCCAACTATTCTGAGGAAAGAATACTCAGGGCAAAAGGGGGAGGTATCAAGATTAAAGTTGAAAATGCGA TTGGGGACATGAGAAGCCAAAGCATCAGTGCAGCTAACTGTTCAATAGATGCCATTCCTGATCTAAATTTCATAAACAAA CGAAAGTTGATTGCCGACAATGAATTTTGCGATCCAGAGACGCCTAAAAGGGCACATACAACATCAAATTGGCTTCTAGA TTTGAATCTTCCAGCTGAAGAGGATGAACATAAACAATCAGATGATGGAAACTCTGAACTTGGCTCCACTGAGAACCAAC ACCTTTGGTTGCAAGGTTTGTACAATCAGGTTGATGAAACAATTTCCTTTGAACCTTATGATTTTGACGCACTTGCGGAT AGAGTGTTTAAAGTGATCAAAATTAACTTCAACAAGATTCTTGGATCCGAGTTTAACTTAGAGATCCAGGGAGAAGTCAT GGAGCAATTGCTTGCAGCTGCATATCTCTCAGACAGGGATATGGAGGTGGAGAATTGGGTGGAGCAAGTTCTCTGTGGAG GATTCACAGAAGCACAGAGAAGATATAACCTCAATGCTAGTTCTATTGTGAAACTTGCTTCATGTACAGCTCCAAGTGTG CACCTTCCTCCAAGGATAATTGTAGAATGAGTCCCTACTTGAAACTGTCTTCTATCTGGATGTATAATTTAGCTGTAGCA TATAGTGAAGCTATTTTGGCCTTCAATCCTATGGTTTTGTTGGGTTTCTTTGTCTAGGTTGTAGTTGTGTATAATATGTT ATCTGCAGCTAGTGCTGTGCGTGATTATCCTTGCATATTTAAATCAAAGTGCTGTCTTCGTTTATATGTTGCTGCTTGCT GTAATTGATAAGTACATACAGCGATAAATTGATTTAGACCCATAAACAAGAGCTGTATAAGTTTATTGGTTAAATTAAGA ATACATTTTCAATCAAGAGATGCTCCTTTTTTT
CDS sequence (LotjaGi6g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAACGCCGGTAGGAGTAGCGAGGCAATGCTTAACAACGGAGGCGGGTCGAGCACTCGACGAGGCGGTGGCGGTAGC ACGGCGGCGCGGCCACGCGCAGACAACGTCGCTCCACGCGGTGTCGGCGCTGCTATCCCTACCATCCTCGACGGTGCTCC GCGACGCGTGCTGCCGCGCGCGAAACTCAGCGTACTCTCCGCGTCTTCAGTTCAAGGCTCTCGACCTGTGCCTGTCGGTG TCGCTCGACCGCTCGCCGTCGTCGCACAACCACCACGTTTCCTCCGATCATGAACCGCCGGTGTCCAACTCGCTCATGGC CGCCATCAAACGCTCGCAGGCTAACCAGCGCCGCCACCCGGATAGCTTCTTCTACCACAGCAACCACCAGGTGCAGCAGC AGCAGCAGCAACCGTTTTCCGTTTCTTCAGTCAAGGTCGAGCTTCAGCACTTGATTCTGTCGATCCTTGATGACCCGGTT GTCAGCCGGGTCTTCGCGGAAGCGGGTTTCCGGAGCTCCGAGATCAAGCTCGCCATTCTCCGCCCTCTGCCGCATCTCAT GAGGCCGCGCGGGCCGCCGGTTTTCCTCTGCGAGCGGCGGGGGTTCGGGTTTCCGTTTTTCTCAGGCTTCGGCGACGCCG GTGAGAATTTCCGGCGAATCGGTGAGGTGCTTGTACGGAGCAGGGGGAGGAATCCTCTGCTTCTCGGCGCGTGCGGCGGC TATGCTCTCCGGAGCTTTACGGAGGCGGTGGAGAGGAGAACGGACGGGGTGTTGCCGCTGGAGCTCACGGGGATGCGCGT GGTTTGCATTGGGAAGGAGGTGGAGAGTGGAGACGGCGAGGCCGTCGGTGCGAAGATGAAGGAGATCGCTGCTATGGCGG AGGAGTGTGTGGGGCCCGGTGTGGCGGTGAATTTTGGGGACTTAAAGGGTTTTGTGGGTGGTGATTCTGATGGGTGTGGT GGTTCTGGGGAAGATGCTGTGAGGTTTGTTGTTGGGGAATTGGCTAAGTTGTTGAAGGTTCACTGTGACAGGTTTTGGTT GCTGGGTGCTGCTGCTAGCTATGAAAGCTACTTGAAATTTCTGGGTAGGTTCCCTTCAATAGAGAAAGACTGGGACTTGC AGTTTTTGCCTATCACCTCTGTTAAGCCTTCTTCCATGGCTGCTGAATCATATCAAAGGCCCAGGTCAAGCTTAATGGAT TCATTTGTACCATTTGGTGGCTTTTTTCCATCAAAGTCTGATTTGAAAAGTCCATTAAATGGCTCATCTTGTTGTCTTCC TCATTGTCATCAATATGGTGAGAAGTGTGAACATGAAGTCTTTTCTGCTTCCGTGGCTGATCCCTACCAATCTAGCTTAC CTCCATGGTTGCAGATTACAGAATTTGGCACAGCAAAGGGATTGAATGTCAAGACCAAAGATGATGGTGTTTTGCTGGAT AGTAGCGAATCTGGACCACCACAGAAGAACTTGGACAAGACATGCCGGCAGCTGCACCAGCGAATTCCGGTGTCAAATAC CTGTCCAATCGTCATCGGGTTTCATTGTACTGACAACAAAAAGGAAGATGCTGAGAACTGCCGCAGCAAAATTACAGACA AATCACCTAGTGAACATGTCAATCTCAACTCCCATGTACCTGTTGGTGTGAAAATGATGTGTGCATCGCAATCCAGCAGT TCTTTTCCTGTGATTTTCATGGCAAAACAGGCGAAATATACTTCAAAACTTCCAGAGATGCTCCAGAAAGTGGAAGATCT TGAGTCCGGTGACCTAAGATCATGCAACATGTCCAGTTCAAGTGTGTCTGATGGCAGTCAACTATCTCCCACATCTGTGA CTTCAGTAACAACAGATCTAGGCTTAGGGCCATGCTCTTCTCCCACCAGCAATAAATCGAAGAAACTAACTTTTCAATAT ACAATGGAGCCTCCAAAAGAAATCCCAAATCACATATCTTCAGATTTCAATTTGACTGATGGGAGTATTTGGAAGCATCA ATCGCAGTCTACATCCTGCTTAAGTTTCGACCATTATCGAGAAGTTGATGCAAAAAATCCCAAAACTCTTTTTGAAGCTC TTTCCAAGGAGGTAAGCTGGCAAAACGAAGCCTTGCGAGCTATCATCAAAACAATAGTTTGCAGCCCAACAGAAAGGGTT AAACATCATGGATCAAATCAGCGCCGTGATATATGGATGAGTTTTGTCGGACCTGATAGGCATGGTAAAAAGAAAATTGC TGTTTCTCTTGCTAAGATATTGTATGGAAGCCGCGAGAGCTTCATTTTTGTGGATCTGGGCTCTGAAGAAATGAAAGGAT GCAATGTCAAATTCATAGGAAAGACTACCATTGATTTTATTGTGAGGGAGTATTGCCAGAAACCTTTGTCTGTGGTTTTC CTGGAAAATGTTGACAAGGCGGATATGGTTGTTCAAAGTAGTTTGTCTCAAGCCATCAGGACAGGAAAAATCACAGATTC TCATGGACGAGAAGTGAGTGTAAACAATGCAATTTTTGTGTTTTCTTTCTCAGGTCACCAAGGTTGTTCCTTTCCAACAA GGGAATCCTCCAACTATTCTGAGGAAAGAATACTCAGGGCAAAAGGGGGAGGTATCAAGATTAAAGTTGAAAATGCGATT GGGGACATGAGAAGCCAAAGCATCAGTGCAGCTAACTGTTCAATAGATGCCATTCCTGATCTAAATTTCATAAACAAACG AAAGTTGATTGCCGACAATGAATTTTGCGATCCAGAGACGCCTAAAAGGGCACATACAACATCAAATTGGCTTCTAGATT TGAATCTTCCAGCTGAAGAGGATGAACATAAACAATCAGATGATGGAAACTCTGAACTTGGCTCCACTGAGAACCAACAC CTTTGGTTGCAAGGTTTGTACAATCAGGTTGATGAAACAATTTCCTTTGAACCTTATGATTTTGACGCACTTGCGGATAG AGTGTTTAAAGTGATCAAAATTAACTTCAACAAGATTCTTGGATCCGAGTTTAACTTAGAGATCCAGGGAGAAGTCATGG AGCAATTGCTTGCAGCTGCATATCTCTCAGACAGGGATATGGAGGTGGAGAATTGGGTGGAGCAAGTTCTCTGTGGAGGA TTCACAGAAGCACAGAGAAGATATAACCTCAATGCTAGTTCTATTGTGAAACTTGCTTCATGTACAGCTCCAAGTGTGCA CCTTCCTCCAAGGATAATTGTAGAATGA
Protein sequence (LotjaGi6g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTPVGVARQCLTTEAGRALDEAVAVARRRGHAQTTSLHAVSALLSLPSSTVLRDACCRARNSAYSPRLQFKALDLCLSV SLDRSPSSHNHHVSSDHEPPVSNSLMAAIKRSQANQRRHPDSFFYHSNHQVQQQQQQPFSVSSVKVELQHLILSILDDPV VSRVFAEAGFRSSEIKLAILRPLPHLMRPRGPPVFLCERRGFGFPFFSGFGDAGENFRRIGEVLVRSRGRNPLLLGACGG YALRSFTEAVERRTDGVLPLELTGMRVVCIGKEVESGDGEAVGAKMKEIAAMAEECVGPGVAVNFGDLKGFVGGDSDGCG GSGEDAVRFVVGELAKLLKVHCDRFWLLGAAASYESYLKFLGRFPSIEKDWDLQFLPITSVKPSSMAAESYQRPRSSLMD SFVPFGGFFPSKSDLKSPLNGSSCCLPHCHQYGEKCEHEVFSASVADPYQSSLPPWLQITEFGTAKGLNVKTKDDGVLLD SSESGPPQKNLDKTCRQLHQRIPVSNTCPIVIGFHCTDNKKEDAENCRSKITDKSPSEHVNLNSHVPVGVKMMCASQSSS SFPVIFMAKQAKYTSKLPEMLQKVEDLESGDLRSCNMSSSSVSDGSQLSPTSVTSVTTDLGLGPCSSPTSNKSKKLTFQY TMEPPKEIPNHISSDFNLTDGSIWKHQSQSTSCLSFDHYREVDAKNPKTLFEALSKEVSWQNEALRAIIKTIVCSPTERV KHHGSNQRRDIWMSFVGPDRHGKKKIAVSLAKILYGSRESFIFVDLGSEEMKGCNVKFIGKTTIDFIVREYCQKPLSVVF LENVDKADMVVQSSLSQAIRTGKITDSHGREVSVNNAIFVFSFSGHQGCSFPTRESSNYSEERILRAKGGGIKIKVENAI GDMRSQSISAANCSIDAIPDLNFINKRKLIADNEFCDPETPKRAHTTSNWLLDLNLPAEEDEHKQSDDGNSELGSTENQH LWLQGLYNQVDETISFEPYDFDALADRVFKVIKINFNKILGSEFNLEIQGEVMEQLLAAAYLSDRDMEVENWVEQVLCGG FTEAQRRYNLNASSIVKLASCTAPSVHLPPRIIVE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 1066 | 1066 | 0.0 | – | |
PANTHER | 1 | 1066 | 1066 | 0.0 | – | |
ProSiteProfiles | 8 | 185 | 178 | 26.543 | – | |
Gene3D | 10 | 182 | 173 | 4.8E-37 | ||
MobiDBLite | 595 | 632 | 38 | - | – | |
Gene3D | 657 | 880 | 224 | 4.5E-26 | – | |
SUPERFAMILY | 682 | 1020 | 339 | 6.2E-15 | ||
Pfam | 733 | 842 | 110 | 7.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein metabolic process | The chemical reactions and pathways involving a protein. Includes protein modification. |
Expression pattern of LotjaGi6g1v0075900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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