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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0086300 |
| Transcript ID | LotjaGi6g1v0086300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|I1LNL8|I1LNL8_SOYBN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi6g1v0086300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:17236239..17239948) extracted from Lotus japonicus Gifu genome v1.2.
TAACTATAAAATCGCAGGCAGGTGCCTCTTTCTCCTCCCTCGCACTTCAGTTGCTCTCTCTGACTCTCCATTTTCTTCCT CTTCAGTCTCCAAATTTCCCTTCTCTCTCTCCCTCTCTCATTGTATCTCACTTCTTTGTATGCACTGCTTCTTGTTCTTA TTTCTTCTCTGCTCTGCTATAAATAAAAAGCACAAACCATTAACCTAAATTAACAACAGTTTTTTGAGTTACTTCCTCTG AATCCGTAAGTTATTCAATATATATATATATATATATATATATTATAACCATTTGATTTGACACTTGGTTTCACAGTTAT ATATATACACCTTTCAAAACATGTATGAGTTGGTTTTGTGATCTTAATTTGCAGTGAGGTTCTGTCAAATTAAGATGACG CAGCAGAATGTGGTAGTGTCTGATTCCCAATCTGGAGTTGCCCTACCAGTTTTCCCAACATCATCACAAAAGCCACAAGG AGGGTACATTCCCATTCCTAGGATGAGGGTCTTGAAGAACCTTGAAATCAATGCATGGATTGAGTCCATGAGATCCTGCT CTCCCACACATCGTAAATCCGCATCCTCTTTTGCTGAAGAGCGAAGCTCTTGGATGGTGAGAACTAACAACACTTATTTT TACTGTTATTATTTACTCACATGTTCAAATTCCAGATACTGTATCTGATTTTGGTCAATTCATGTATAATACGTTTTCAT TTTCATCAAACAGCTTAACCACCCATCGGCATTAGACATGTTTGACGAAATTATGGAAGCATCAAAGGGAAAGCAAATTG TCATGTTTTTGGACTATGATGGTACACTGTCCCCTATAGTGGACGACGCTGACTGTGCTTTTATGTCTGATTCGGTTAGT TTCTTTGCTTGACGATATTGTTAGTTTATGTTAAGGTCCCACATTTACTAGAGATATGATCTAATAAGTCATTATAAATT GGGAGGGAAGTTCTCACATATAAGCTAGCTTTTGGAGTAGTGTTAGGCTTAACCCGATTTCTAAATGTTGAATTAACCTT GTTGTCTTACTGTTTTTTGTTGTGCATCAGATGAGAAAAACAGTGAGGAAGCTTGCAAGGTGTTGTCCTACTGCTATAGT GACTGGCAGAAGCAAGGACAAGGTATAATTTGGAAGTTGGTTATTCAATTCTTGTCCTGTCCTTCCCCCCGTTTTTTTTC TTTTTTTTTTCTTTTGTACTAATTTGATGTTGTTTTGGAAACAATAGGTGTACAATTTTGTTCGGTTGGCAGAGCTATAT TATGCTGGAAGCCATGGCATGGATATTAAAGGGCCAACAAGAAGTTCCAAATACAACAAAGTGAGGGAGTTAGCTATATT CAAAACATTCATAATATCTATGAAAGCTCATAGTTTTGCATTGGTTGTGATTTGTAGGATAGCAAAGCTAAAACAATTCT TTTTCAACCTGCCAGTGAATTTCTTCCAATGATAAATGAGGTTTGTCTATTTCTTCCATCTTATTTCTAACATTTTTTTA TCACAATCACACCACACGTCATAACTCTCATTTCTCTTATTCATTCTATCTCTCCGAATACGGGTGAATTCGGGGTGTGA ATACTGACAGTGATAAGGACACAGTACAATATTGATAAACTGTTACGAGCAATGTAAAATTTATAATCCACCTGGACACT ATACATGTGTCTATGTTTGCACACATGTGTACATGTGGATGTGTATAAGTGGAAGACTTTTATTAATATTTTCCATGTTC CAACCTTTTTTTGTATAGATTGTAGGTTTATTTTTTAAGGTTACATAAAAAGAAAATGAAGTTTTTTATGTGTGTGCTTC AATTACTTAGTATTATTTGAGTGTTTCTTAAGTGTATATACAAGTTGTTGATTCATACGGCAAAAATAAATTTTGGTTAT TTTTTTACAATTTTTTAGGTGTACCAACAATTGGTTGAGAAGACAAAATCAACTCCTGGAGCCAAGGTTGAGAACAACAA GTTCTGCACCTCCGTTCATTTTCGTTGCGTTGATGAACAGGTACAAATTATAATTGAAGCCATCCATGTTTCAGACATAT GCTTATCGAAATTGTTGTAGTATTTCTAGTTGGCTGAGATTCTCTTTAAGTATAATTGACTATTGTTCTGTTCATGAAAA TTAAAGTCTAACCCAAAAGCATTATTATATGCATAGAAATGGAGTGAACTGGCATACCAAGTGAAATCAGTGATAAAGAA CTACCCAAAGCTTCGCCTTACACAAGGAAGAAAGGTGGGGCCATAGTTCTGTTTTCTTGTTTGTTATCTATATTTTCTTA TTGGGTGTTTGGTTTAGTTTAAAGGAGGGTAATAAGATATCTGAATCTCAAGTTTCAATGTTAATTTTTATGCAGGTACT AGAGATTCGTCCTGCTATTAAATGGGACAAAGGAAAAGCCCTGGAATTTTTATTAGAGTCACTTGGTGAGTTTTAGTCTA ACACACACATAAATACTTTATGTTTTGGATTCTCATTTTGTTGTCACAATCGAACATGTGCTAAATATTCATGTTATGAA ACATGTAATAATGGCACAAAGCACGTGTAAGCCGCTGCTCTGCTATTTAGAGTTGTTGACAAGTTGATTAATTTAGTCAT TGAAGATTGATTATTTATGCCCAGAAGCTCATTAAATTATATTATTTTTGTTCCAAATTGCCAACCAACATTAAATAACA AAAATAATTTTAACAGGATTGGCCAATTGCAGCGATGTGTTTCCTGTTTATATTGGCGATGATCGATCTGATGAAGATGC GTTCAAGGTATCCAAAGATCTCATTTGAATTTTTTTTCTCCTCAATTTGTTTGAAGTTCTCTTAAAAAATGTCCACCATG AAAATAAGTCCTCTTTAAAGATCCTAAGTATTATGGAGGCTAACTGTTTTTAAGTTAGTTATCATCTTTGGGAATTGTGA TAGTTCAAAATTTTAATGTTTTAAAATATATTTTCCATACGCAGAAATTAAGAGACAGAGGACAAGGCTTTGGCATTCTT GTGTCGAAGTTTCCAAAAGACACAAGTGCATCTTACTCTTTGCAGGAACCCAATGAGGCAAGTAGATTTTTTTCTACTTC ATCTTTATTATTATTATTTTTAGTTTTGCCAAGGTATCCCACACACACTGTAGTTATATATGAGTTTAATCCTCACAAGA TTTGGGTATCACATTAAGTAACTAGGACTCTTCCAACAAATCATTTTCCATACATACTGTTTAAGGATTGAACCCCCGAC TAAATGCTTAAGAAACCCAACTACACCTACATGCATCTTGTTTGGTTACTTCATCTTTATTTGAACCATTAGGTCCTAAA CCTACAATATAAATGACTATTATTATTTTATTTCATGCAGGTGATGTATTTTCTTCAACGCTTGGTGGAGTGGAAACATG GATCACTGCGAGCGGGAGTTATGAGTCACATGAAATGAAATGTACATGCTCTACCCTGCCACTAAAAGGAAGTTGAGCTT GGGTAGATATAAGGTCATTTTGTATTTTTCGCTGAAGACAGAAGAAAAGAAAGAAAAAGATGTATGGGAACAGAAAGACA AAAAAGTGTCTTTGTTGGTTTGAAACAAATGTCTACATTCATGTAATTAGCTAAGTAGTACGTACTACGTAGAATATGTA AAAGTTAATATGTAAGTTGGAATGAATAGA
CDS sequence (LotjaGi6g1v0086300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGCAGCAGAATGTGGTAGTGTCTGATTCCCAATCTGGAGTTGCCCTACCAGTTTTCCCAACATCATCACAAAAGCC ACAAGGAGGGTACATTCCCATTCCTAGGATGAGGGTCTTGAAGAACCTTGAAATCAATGCATGGATTGAGTCCATGAGAT CCTGCTCTCCCACACATCGTAAATCCGCATCCTCTTTTGCTGAAGAGCGAAGCTCTTGGATGCTTAACCACCCATCGGCA TTAGACATGTTTGACGAAATTATGGAAGCATCAAAGGGAAAGCAAATTGTCATGTTTTTGGACTATGATGGTACACTGTC CCCTATAGTGGACGACGCTGACTGTGCTTTTATGTCTGATTCGATGAGAAAAACAGTGAGGAAGCTTGCAAGGTGTTGTC CTACTGCTATAGTGACTGGCAGAAGCAAGGACAAGGTGTACAATTTTGTTCGGTTGGCAGAGCTATATTATGCTGGAAGC CATGGCATGGATATTAAAGGGCCAACAAGAAGTTCCAAATACAACAAAGATAGCAAAGCTAAAACAATTCTTTTTCAACC TGCCAGTGAATTTCTTCCAATGATAAATGAGGTGTACCAACAATTGGTTGAGAAGACAAAATCAACTCCTGGAGCCAAGG TTGAGAACAACAAGTTCTGCACCTCCGTTCATTTTCGTTGCGTTGATGAACAGAAATGGAGTGAACTGGCATACCAAGTG AAATCAGTGATAAAGAACTACCCAAAGCTTCGCCTTACACAAGGAAGAAAGGTACTAGAGATTCGTCCTGCTATTAAATG GGACAAAGGAAAAGCCCTGGAATTTTTATTAGAGTCACTTGGATTGGCCAATTGCAGCGATGTGTTTCCTGTTTATATTG GCGATGATCGATCTGATGAAGATGCGTTCAAGAAATTAAGAGACAGAGGACAAGGCTTTGGCATTCTTGTGTCGAAGTTT CCAAAAGACACAAGTGCATCTTACTCTTTGCAGGAACCCAATGAGGTGATGTATTTTCTTCAACGCTTGGTGGAGTGGAA ACATGGATCACTGCGAGCGGGAGTTATGAGTCACATGAAATGA
Protein sequence (LotjaGi6g1v0086300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQQNVVVSDSQSGVALPVFPTSSQKPQGGYIPIPRMRVLKNLEINAWIESMRSCSPTHRKSASSFAEERSSWMLNHPSA LDMFDEIMEASKGKQIVMFLDYDGTLSPIVDDADCAFMSDSMRKTVRKLARCCPTAIVTGRSKDKVYNFVRLAELYYAGS HGMDIKGPTRSSKYNKDSKAKTILFQPASEFLPMINEVYQQLVEKTKSTPGAKVENNKFCTSVHFRCVDEQKWSELAYQV KSVIKNYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKF PKDTSASYSLQEPNEVMYFLQRLVEWKHGSLRAGVMSHMK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 352 | 352 | 8.5E-174 | – | |
| PANTHER | 1 | 352 | 352 | 8.5E-174 | – | |
| TIGRFAM | 94 | 344 | 251 | 1.6E-45 | ||
| Gene3D | 96 | 186 | 91 | 3.0E-19 | ||
| SUPERFAMILY | 97 | 345 | 249 | 1.65E-45 | ||
| CDD | 97 | 337 | 241 | 5.46081E-61 | – | |
| TIGRFAM | 98 | 309 | 212 | 2.9E-19 | ||
| Pfam | 99 | 333 | 235 | 1.5E-77 | ||
| Gene3D | 195 | 358 | 164 | 2.7E-21 | ||
| Coils | 359 | 360 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi6g1v0086300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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