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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0086300 |
| Transcript ID | LotjaGi6g1v0086300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J; TrEMBL-Plants: tr|A0A0L9UAW9|A0A0L9UAW9_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi6g1v0086300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:17236276..17240055) extracted from Lotus japonicus Gifu genome v1.2.
CCTCGCACTTCAGTTGCTCTCTCTGACTCTCCATTTTCTTCCTCTTCAGTCTCCAAATTTCCCTTCTCTCTCTCCCTCTC TCATTGTATCTCACTTCTTTGTATGCACTGCTTCTTGTTCTTATTTCTTCTCTGCTCTGCTATAAATAAAAAGCACAAAC CATTAACCTAAATTAACAACAGTTTTTTGAGTTACTTCCTCTGAATCCGTAAGTTATTCAATATATATATATATATATAT ATATATTATAACCATTTGATTTGACACTTGGTTTCACAGTTATATATATACACCTTTCAAAACATGTATGAGTTGGTTTT GTGATCTTAATTTGCAGTGAGGTTCTGTCAAATTAAGATGACGCAGCAGAATGTGGTAGTGTCTGATTCCCAATCTGGAG TTGCCCTACCAGTTTTCCCAACATCATCACAAAAGCCACAAGGAGGGTACATTCCCATTCCTAGGATGAGGGTCTTGAAG AACCTTGAAATCAATGCATGGATTGAGTCCATGAGATCCTGCTCTCCCACACATCGTAAATCCGCATCCTCTTTTGCTGA AGAGCGAAGCTCTTGGATGGTGAGAACTAACAACACTTATTTTTACTGTTATTATTTACTCACATGTTCAAATTCCAGAT ACTGTATCTGATTTTGGTCAATTCATGTATAATACGTTTTCATTTTCATCAAACAGCTTAACCACCCATCGGCATTAGAC ATGTTTGACGAAATTATGGAAGCATCAAAGGGAAAGCAAATTGTCATGTTTTTGGACTATGATGGTACACTGTCCCCTAT AGTGGACGACGCTGACTGTGCTTTTATGTCTGATTCGGTTAGTTTCTTTGCTTGACGATATTGTTAGTTTATGTTAAGGT CCCACATTTACTAGAGATATGATCTAATAAGTCATTATAAATTGGGAGGGAAGTTCTCACATATAAGCTAGCTTTTGGAG TAGTGTTAGGCTTAACCCGATTTCTAAATGTTGAATTAACCTTGTTGTCTTACTGTTTTTTGTTGTGCATCAGATGAGAA AAACAGTGAGGAAGCTTGCAAGGTGTTGTCCTACTGCTATAGTGACTGGCAGAAGCAAGGACAAGGTATAATTTGGAAGT TGGTTATTCAATTCTTGTCCTGTCCTTCCCCCCGTTTTTTTTCTTTTTTTTTTCTTTTGTACTAATTTGATGTTGTTTTG GAAACAATAGGTGTACAATTTTGTTCGGTTGGCAGAGCTATATTATGCTGGAAGCCATGGCATGGATATTAAAGGGCCAA CAAGAAGTTCCAAATACAACAAAGTGAGGGAGTTAGCTATATTCAAAACATTCATAATATCTATGAAAGCTCATAGTTTT GCATTGGTTGTGATTTGTAGGATAGCAAAGCTAAAACAATTCTTTTTCAACCTGCCAGTGAATTTCTTCCAATGATAAAT GAGGTTTGTCTATTTCTTCCATCTTATTTCTAACATTTTTTTATCACAATCACACCACACGTCATAACTCTCATTTCTCT TATTCATTCTATCTCTCCGAATACGGGTGAATTCGGGGTGTGAATACTGACAGTGATAAGGACACAGTACAATATTGATA AACTGTTACGAGCAATGTAAAATTTATAATCCACCTGGACACTATACATGTGTCTATGTTTGCACACATGTGTACATGTG GATGTGTATAAGTGGAAGACTTTTATTAATATTTTCCATGTTCCAACCTTTTTTTGTATAGATTGTAGGTTTATTTTTTA AGGTTACATAAAAAGAAAATGAAGTTTTTTATGTGTGTGCTTCAATTACTTAGTATTATTTGAGTGTTTCTTAAGTGTAT ATACAAGTTGTTGATTCATACGGCAAAAATAAATTTTGGTTATTTTTTTACAATTTTTTAGGTGTACCAACAATTGGTTG AGAAGACAAAATCAACTCCTGGAGCCAAGGTTGAGAACAACAAGTTCTGCACCTCCGTTCATTTTCGTTGCGTTGATGAA CAGGTACAAATTATAATTGAAGCCATCCATGTTTCAGACATATGCTTATCGAAATTGTTGTAGTATTTCTAGTTGGCTGA GATTCTCTTTAAGTATAATTGACTATTGTTCTGTTCATGAAAATTAAAGTCTAACCCAAAAGCATTATTATATGCATAGA AATGGAGTGAACTGGCATACCAAGTGAAATCAGTGATAAAGAACTACCCAAAGCTTCGCCTTACACAAGGAAGAAAGGTG GGGCCATAGTTCTGTTTTCTTGTTTGTTATCTATATTTTCTTATTGGGTGTTTGGTTTAGTTTAAAGGAGGGTAATAAGA TATCTGAATCTCAAGTTTCAATGTTAATTTTTATGCAGGTACTAGAGATTCGTCCTGCTATTAAATGGGACAAAGGAAAA GCCCTGGAATTTTTATTAGAGTCACTTGGTGAGTTTTAGTCTAACACACACATAAATACTTTATGTTTTGGATTCTCATT TTGTTGTCACAATCGAACATGTGCTAAATATTCATGTTATGAAACATGTAATAATGGCACAAAGCACGTGTAAGCCGCTG CTCTGCTATTTAGAGTTGTTGACAAGTTGATTAATTTAGTCATTGAAGATTGATTATTTATGCCCAGAAGCTCATTAAAT TATATTATTTTTGTTCCAAATTGCCAACCAACATTAAATAACAAAAATAATTTTAACAGGATTGGCCAATTGCAGCGATG TGTTTCCTGTTTATATTGGCGATGATCGATCTGATGAAGATGCGTTCAAGGTATCCAAAGATCTCATTTGAATTTTTTTT CTCCTCAATTTGTTTGAAGTTCTCTTAAAAAATGTCCACCATGAAAATAAGTCCTCTTTAAAGATCCTAAGTATTATGGA GGCTAACTGTTTTTAAGTTAGTTATCATCTTTGGGAATTGTGATAGTTCAAAATTTTAATGTTTTAAAATATATTTTCCA TACGCAGAAATTAAGAGACAGAGGACAAGGCTTTGGCATTCTTGTGTCGAAGTTTCCAAAAGACACAAGTGCATCTTACT CTTTGCAGGAACCCAATGAGGCAAGTAGATTTTTTTCTACTTCATCTTTATTATTATTATTTTTAGTTTTGCCAAGGTAT CCCACACACACTGTAGTTATATATGAGTTTAATCCTCACAAGATTTGGGTATCACATTAAGTAACTAGGACTCTTCCAAC AAATCATTTTCCATACATACTGTTTAAGGATTGAACCCCCGACTAAATGCTTAAGAAACCCAACTACACCTACATGCATC TTGTTTGGTTACTTCATCTTTATTTGAACCATTAGGTCCTAAACCTACAATATAAATGACTATTATTATTTTATTTCATG CAGGTGATGTATTTTCTTCAACGCTTGGTGGAGTGGAAACATGGATCACTGCGAGCGGGAGTTATGAGTCACATGAAATG AAATGTACATGCTCTACCCTGCCACTAAAAGGAAGTTGAGCTTGGGTAGATATAAGGTCATTTTGTATTTTTCGCTGAAG ACAGAAGAAAAGAAAGAAAAAGATGTATGGGAACAGAAAGACAAAAAAGTGTCTTTGTTGGTTTGAAACAAATGTCTACA TTCATGTAATTAGCTAAGTAGTACGTACTACGTAGAATATGTAAAAGTTAATATGTAAGTTGGAATGAATAGATTTCTGT GCTTTCCCTCATTACTTCTGCCATGATTCTAGCTAGAATAGTTGCTTAAATTTTATTTGGTGGCTACATGGAAAAATTAA TAAACAAGTTAATGGTCGAT
CDS sequence (LotjaGi6g1v0086300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGCAGCAGAATGTGGTAGTGTCTGATTCCCAATCTGGAGTTGCCCTACCAGTTTTCCCAACATCATCACAAAAGCC ACAAGGAGGGTACATTCCCATTCCTAGGATGAGGGTCTTGAAGAACCTTGAAATCAATGCATGGATTGAGTCCATGAGAT CCTGCTCTCCCACACATCGTAAATCCGCATCCTCTTTTGCTGAAGAGCGAAGCTCTTGGATGCTTAACCACCCATCGGCA TTAGACATGTTTGACGAAATTATGGAAGCATCAAAGGGAAAGCAAATTGTCATGTTTTTGGACTATGATGGTACACTGTC CCCTATAGTGGACGACGCTGACTGTGCTTTTATGTCTGATTCGATGAGAAAAACAGTGAGGAAGCTTGCAAGGTGTTGTC CTACTGCTATAGTGACTGGCAGAAGCAAGGACAAGGTGTACAATTTTGTTCGGTTGGCAGAGCTATATTATGCTGGAAGC CATGGCATGGATATTAAAGGGCCAACAAGAAGTTCCAAATACAACAAAGATAGCAAAGCTAAAACAATTCTTTTTCAACC TGCCAGTGAATTTCTTCCAATGATAAATGAGGTGTACCAACAATTGGTTGAGAAGACAAAATCAACTCCTGGAGCCAAGG TTGAGAACAACAAGTTCTGCACCTCCGTTCATTTTCGTTGCGTTGATGAACAGAAATGGAGTGAACTGGCATACCAAGTG AAATCAGTGATAAAGAACTACCCAAAGCTTCGCCTTACACAAGGAAGAAAGGTACTAGAGATTCGTCCTGCTATTAAATG GGACAAAGGAAAAGCCCTGGAATTTTTATTAGAGTCACTTGGATTGGCCAATTGCAGCGATGTGTTTCCTGTTTATATTG GCGATGATCGATCTGATGAAGATGCGTTCAAGAAATTAAGAGACAGAGGACAAGGCTTTGGCATTCTTGTGTCGAAGTTT CCAAAAGACACAAGTGCATCTTACTCTTTGCAGGAACCCAATGAGGCAAGTAGATTTTTTTCTACTTCATCTTTATTATT ATTATTTTTAGTTTTGCCAAGGTATCCCACACACACTGTAGTTATATATGAGTTTAATCCTCACAAGATTTGGGTATCAC ATTAA
Protein sequence (LotjaGi6g1v0086300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQQNVVVSDSQSGVALPVFPTSSQKPQGGYIPIPRMRVLKNLEINAWIESMRSCSPTHRKSASSFAEERSSWMLNHPSA LDMFDEIMEASKGKQIVMFLDYDGTLSPIVDDADCAFMSDSMRKTVRKLARCCPTAIVTGRSKDKVYNFVRLAELYYAGS HGMDIKGPTRSSKYNKDSKAKTILFQPASEFLPMINEVYQQLVEKTKSTPGAKVENNKFCTSVHFRCVDEQKWSELAYQV KSVIKNYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKF PKDTSASYSLQEPNEASRFFSTSSLLLLFLVLPRYPTHTVVIYEFNPHKIWVSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 340 | 340 | 2.1E-167 | – | |
| PANTHER | 1 | 340 | 340 | 2.1E-167 | – | |
| TIGRFAM | 94 | 341 | 248 | 2.9E-43 | ||
| CDD | 97 | 333 | 237 | 1.33805E-59 | – | |
| SUPERFAMILY | 97 | 342 | 246 | 6.39E-43 | ||
| TIGRFAM | 98 | 309 | 212 | 3.2E-19 | ||
| Gene3D | 98 | 330 | 233 | 7.7E-43 | ||
| Pfam | 99 | 333 | 235 | 1.6E-77 | ||
| Gene3D | 178 | 264 | 87 | 7.7E-43 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi6g1v0086300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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