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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0088100 |
| Transcript ID | LotjaGi6g1v0088100.3 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:17798465..17804573) extracted from Lotus japonicus Gifu genome v1.2.
TCATACGTTTTGGGCCAACAAGACTATACCAAGATACTCCAAGATATATGATGCACTATTTTGTGGTATGATTGATTATA CTAAAATGAAACTGAATCTTGTTTTTGTTTTTGGTCACAACATAAGAGAATCTTCTGACAATCAGTGAGAATTAGTACTA TTATTTTAGAAAAGGAAACATCTTATATTCGAATAAATAAATACAAATAGTGAATCCTTGTATTTCATTATTCACACTCC ATTCAACTTTTTCCCCATTCTTCAGTTTCGTTTCACCTTCTTGCATATTTTGCTTTGCAGCCGCCATGTGCGGAATCCTT GCAGTGTTTGGTTGCGTCGACAACTCTCAGGCCAAACGCGCCCGCATCATCGAGTTATCTCGCAGGTCTCATTCACATTT CTATTATCTCTTTCATTTCTCGAAACATGAGTTTTCATTTGAATATATATAAACAATAATGATACACTACCTTTTCATTT GTGATTTCACTTCATGCATGCAACAACAACAACAACAACAACAAAAACCCTATTTTAAACCATTTCGCTTTATGCAGCAG CTAATTGTGTTTTTTTTAAAGGGTTTATTTGTTTGATGCTTGGTTATCTAATGTTTATTAATTAGTTTTTTTATTTATTT TTTGGTTCTGATTTGTGTGTGGTTGTGATGAATTTGGAAAATGTAGGTTGAGGCATCGAGGTCCTGATTGGAGTGGCTTG CATTGCCATGAGGATTGTTACCTTGCTCATCAGCGTCTCGCTATTATCGACCCTACTTCAGGGGATCAACCTCTCTACAA TGAGGACAAGACTGTTTTTGTCACTGTATGTATCTTTCAGCCCTTTTTGAAGAAAAATGTTTGATTTACATGCATGATTG AGATGTATAAACCCCACATTCACAGGAAGAGTGATAAAGAAAGAATCACAAAAGTTGGATAATGCGGGCGAAAATTTAAC ACAATAAGTAAAATTATAGTCAGTAATTGGAAAAGGTAGTGTAAAAATTTTACGAGGGTAAAAATAACATTTGAATACTA TTTTATTGCGGAGCGACTCCTATTTTGTCACTATGTTGGTTCGTCCCCTGTATATGATATGATGTAACAGGAAGATAATG AGAGTGAAGGTATAAAAAAAATCAGAATTGTTATTTTATGATAATATAATTTATATGCATTTTTTGGATTATTCATTTCA CTAGAACATGCATTGTTTAGCTGGAAGTGCTTAAAAGTTAAAAATGGATGCAGTTTCATGAATAGTAAGCTTATAATCTA TGGCATGGTCTAGTAATTAGTCTAACAACCTAGGAAATGGGATTTTCCTACTAGACCAAAAACTCCAGTACTGCATTGTT GAACATGAGTGATACTTTTCATTTTTGGATCTCTATCATTTTTGTTGTTTTCACCCTTTAATTTCTGTGACATGTACTGA ACTTGTTTCTAGATATTTTGCTTATCACATACCTCATATTTTGCTGCTGAAACTATGGCATTAGGTGAATGGGGAGATAT ACAACCATAAGGATTTGAGACAGACACTGAAGTCCCATCAACTTCGAACTGGCAGTGATTGTGAAGTGATTTCCCATCTT GTAAGTGTTGTAGAATCAGTTAGATTTGGTAATCAACTTACTATTTTCCCATAAATGATGAGGATTTTCTATCGTTGTAA TTCATTATCATGACAGTATGAAGAGCATGGAGAAGACTTTATTGATATGCTGGATGGAATGTTCTCCTTCATCCTTCTTG ATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGCTGGGGCCATGATGGT ATGTGGCTTCACCATCTTCTTTTTGCTGAAACATTTTACATTCCATTTTACATTCAACCTCTTGAATTTAGCTATCTGTT CTTCAATTTAAGTGAATTCAAGAGACGCATGAGTTTGTATGTTGTGGTTTCGGATATACTAATTGTATTTTCAATAAAGT GGAATAATAATGAAACGTGTCCATGACTGTGGCTTGAAACCTTCATCAACTAAACTCTCAGCTTTATGCAGGAGATCCTG TAAAAGTTGAGTGTTCCAACATGCATTTTCGCTTACAATTTTAGACACCTGAGTTTTCGTGGTATAAATTTTACAATGAA ATTTGATAAGTGGCTAAGTTCGTATCGTATAGATTAATGCTAAGTTCTCCACTGAATATTCATGCAAGCATTAGGACGAC TTTGTTAATCAACAAGCGGGTTTACATTTTGAACATGTTCTAGCTAGTTTTCCTATGGAAAATAAATGAAGCATCTCTTT CTCTCTCTCTCTTGCACACATACACACTCATCTTTTTTATTCTAGAATACAAAATTTTGGTTTGTATATTCACTTGGATC TACACGGCGTTCTTTCTGCTGTAACTCTTGATGGTTTACTTTTGTATTTTTATCACATGAATTATGAAGATATATTATAT ATGGAAGTGCGATTTATTTGCAGGATCAATATGGTTTGCATCTGAAATGAAAGGTCTGAGTGATGATTGTGAAAGATTCA TATCTTTTCCACCGGGGCATATATATTCCAGCAAACAGGGTATGAATGATACCATTTGTTCAGTTATCTATTTATATCTT GTAATTCCCATATTTTTCTAATACCCATTTTCTGTCTAAATGTTTCATTTTAGATCTTATACAATCCCTTATGTTTCCTG TTAAAATTTGCTCTATATGCAGGAGGATTAAGAAGGTGGTACAATCCGCCATGGTTCTCAGAGCATATTCCTTCTACACC TTATGATCCAATGATTTTGCGTCAGGCCTTTGAGAGGGTAAGCTGCCATTGTATTATCTGCCTACTTCTTTCATCACTTC GAGATGTTTCTTCCCAGGGTAGAAAATTTCAGTTCCAGTGAATTTGCTTAAAAATGCTTCAGACTTGCTGGCTTGCTGCT GCTTGCCCGGAAACTTTAGAGGGTTAAAACTAAAACCATTAAACTTCAGGAAGAGGCATCACAATAAATTCAGGAAAGTC ATGCGGTAAGCAGGGGTTAAGAAACCAAAATGCACCATGAACTGAGACTTGCCCTTCTGTGGAAGTATACTTAACCTCTA CAAGAACATAAGGGCATCTTAGGAATAGTGCATCATCAGTGTCTGTTGAATCTGTGAGGTCAAAGTACTGAATAAGGGGT TGCAAGGTGTTAGTTGTGGAAGATTTATGAGTTGCAAATTCAAGAGGGCTAATATTACTATGTGCTAGTTTGTGGATGGG ATTGCTCGTTTTGTTCATTTTTAGTGACTTCTATTGTGTGGTGGAGTCATTCTAACAGATAGCATGACTTCTTATCATAA AATCTCTTTTATGTCTTCTTTTACTATGATATGAACAGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTT CTTTTGTCTGGAGGATTGGACTCATCACTTGTTGCTGCTGTGGCCAATCGTCATTTGGCTGCATCTGAAGCTGCTTGCCA GTGGGGATCGCAGTTACATACTTTTTGCATTGGTTTAAAGGTAATAATTCATTCCTCATTCATCTTCAACCTCTGAAACT AGTATATGAGCATTAATATGCTTCATGATTTGCCTTTACCCCCATTCAGGGGTCCCCGGATTTAAAAGCTGCAAAAGAGG TAGCAGATTATCTAGGTACTTGTCACCACGAACTGAATTTCACTGTTCAGGTAACCGTTTCTCTTTAGGTCTTCATATTT TTTTTTCAAACATGAGATTTTAATGGCTACTCTTAAGTGATGTTCTGTTTTTGCTATATCAGGAAGGTATAGATGCACTT GAAGAAGTCATATACCATATTGAAACATATGATGTAACGACTATCAGAGCTAGTACTCCAATGTTTCTGATGTCCAGAAA AATTAAATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATA AGGCACCTAACAAGGAGGAATTTCACGAAGAAACGTGTCAAAAAGTAATATAAAATAATTGTTATGTTCTTATAGTTTGA TTTACTTTAATTTGCAGAATATTGTGTTTTAGCATGTTACATTCCCTATTTATCTCTTAGTTCCTTGTGTACGTTTAAGT TTTTGATGCTTTTGATGATTTGGCAGATTAAAGGTCTTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCA TGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATT GGTATTGATTTTGTGAACCTTGCAGCTAAAGCTAAACAAATGTCATTTTTCAACTTCTTGATTTAGTTTGAATGCTTAAG TTTGCTACTTTTGGTTATCCTGTATTGTGATTCTTGTTGCATGTCCCATATGTATTCTTTAAAGTGAAGCAAATTCCTAG GCATATGTTTTTCTTAACGAATAAAGCATGTGCATATGGACAATTATAAGTTAGTAATTGTTGATGTCGCATATTAACTA GAGATATGGTCAAATAACTGCTTATAAATGGAAGTGGAGTCCTCTACCCTGTGTAGAGTTAGGCCTAACCTGAATTCTTT TTTTTTGAAATGAACCTGAATTCTAAGACTAAGAAATTGGTTTTATGGGCATGTGAAGTTAATTTATTGTTGGTTTCAGT TTTTAACACATCATGAACTTTATGACAAATTTCACAGATAAAGCCTGATATTGGAAGGATAGAAAAGTGGGTATTGCGCA ATGCATTTGATGATGATAAGAATCCATATTTACCAAAGGTTTGTTTTAACTTCTGCTTCATGCTTATTCATTTATCTCTT GAAAGATTTCTGAAATAAATTTTTTTCTTCATTTTTTAGCACATATTATACAGGCAGAAGGAACAGTTCAGTGACGGTGT TGGCTACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTAGGCACTAACTTGTTTTGCTGAACTTTCTTTT TTGATGCAATGCCACAATGTTTAAATTAATATTATGGATCCATTTGAGAATAATATCCTTGATTTCTGTCATTTTTTCTC TTGATAAATGTCCAGGTCACAGATTCAATGCTGAAGCATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGA GGGATATCTCTACCGGACAATTTTTGAGAAGATATATCCAAAGGTGGACTTTATAGTTTTGTTTTTTGATAAAAATTGCA TATTTATTCACTGTCATGTGTTGTGTCTGTTCATGAGAGACCATGGTGCAACTAATCAGAGAGTAGTCTTGTTATTTGAT TTGATTTAGTCTAAGATGAAATTGATCCAACCATGTGGATTAGCTTAAATCATAGTGAGCAAAAGCAACTTCCCATGGCT TTTGTGGTTGTGCGCCGTCACGGTAGTTTTCCGTGCATCCAAACATGCACTAATGTTTTCCCACTATCAACTTCGACACC CAAAAGCTTCTCTAACATTCACTAAATCACAAGTCAGTGGTTCAATTTTTTTCTAATATTTTATCTATTGGTTTTGATCA AAATTTTTCATGAGTTTTGATGTACTCACACATCTCTTTCTCTTCCATTTTATTTCTACTCACTTTGTTTTTATCAGATC ATAATTCATACATCATATCTCTCATTTCTCCTTCTTTTATTCTTCTCTGTCTGTCTCTTGGGGTGTGGGTGTAATGAGTG TGAATGAATTATTATTGTTGTCATCTTAGTTGATATTAAGAGCTTTTCCACCCTAGCCTCACATTGTAATTTGCACACAA ATTGATTGACTTGTTTATAAATTTAAAATCTTGTCAAATCCTCTTTCTAATGATGTTGAATCATTTGAACAGAATGCTGC TAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAAAGCTGTGGAATGGGATGCAACTTGGTCCAAAA ATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGTATGCAGATGCACCATAATAACCGAGATCAATA ACGGGTCCATCTAAAGTTGATGAAAATGA
CDS sequence (LotjaGi6g1v0088100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCGGAATCCTTGCAGTGTTTGGTTGCGTCGACAACTCTCAGGCCAAACGCGCCCGCATCATCGAGTTATCTCGCAG GTTGAGGCATCGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGAGGATTGTTACCTTGCTCATCAGCGTCTCGCTATTG TGAATGGGGAGATATACAACCATAAGGATTTGAGACAGACACTGAAGTCCCATCAACTTCGAACTGGCAGTGATTGTGAA GTGATTTCCCATCTTTATGAAGAGCATGGAGAAGACTTTATTGATATGCTGGATGGAATGTTCTCCTTCATCCTTCTTGA TACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGCTGGGGCCATGATGGAT CAATATGGTTTGCATCTGAAATGAAAGGTCTGAGTGATGATTGTGAAAGATTCATATCTTTTCCACCGGGGCATATATAT TCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCGCCATGGTTCTCAGAGCATATTCCTTCTACACCTTATGATCC AATGATTTTGCGTCAGGCCTTTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTG GAGGATTGGACTCATCACTTGTTGCTGCTGTGGCCAATCGTCATTTGGCTGCATCTGAAGCTGCTTGCCAGTGGGGATCG CAGTTACATACTTTTTGCATTGGTTTAAAGGGGTCCCCGGATTTAAAAGCTGCAAAAGAGGTAGCAGATTATCTAGGTAC TTGTCACCACGAACTGAATTTCACTGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATATACCATATTGAAACATATG ATGTAACGACTATCAGAGCTAGTACTCCAATGTTTCTGATGTCCAGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTT TCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAGGAATTTCACGAAGA AACGTGTCAAAAAATTAAAGGTCTTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCATGGGGTGTAGAGG CACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATTGATAAAGCCTGAT ATTGGAAGGATAGAAAAGTGGGTATTGCGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTATA CAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGCTACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTCA CAGATTCAATGCTGAAGCATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGATATCTCTACCGGACA ATTTTTGAGAAGATATATCCAAAGAATGCTGCTAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAA AGCTGTGGAATGGGATGCAACTTGGTCCAAAAATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGT ATGCAGATGCACCATAA
Protein sequence (LotjaGi6g1v0088100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCGILAVFGCVDNSQAKRARIIELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIVNGEIYNHKDLRQTLKSHQLRTGSDCE VISHLYEEHGEDFIDMLDGMFSFILLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKGLSDDCERFISFPPGHIY SSKQGGLRRWYNPPWFSEHIPSTPYDPMILRQAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRHLAASEAACQWGS QLHTFCIGLKGSPDLKAAKEVADYLGTCHHELNFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVL SGEGSDEIFGGYLYFHKAPNKEEFHEETCQKIKGLHLYDCLRANKSTSAWGVEARVPFLDKEFINIAMDMDPEWKLIKPD IGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHADKQVTDSMLKHANCVYPENTPTTKEGYLYRT IFEKIYPKNAARQTVPGGPSVACSTAKAVEWDATWSKNPDPSGRAALGVHAAAYADAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 535 | 535 | 0.0 | – | |
| SUPERFAMILY | 1 | 175 | 175 | 1.29E-45 | ||
| PIRSF | 1 | 55 | 55 | 6.4E-12 | ||
| PANTHER | 1 | 535 | 535 | 0.0 | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| CDD | 2 | 172 | 171 | 7.57794E-66 | ||
| Phobius | 2 | 11 | 10 | - | – | |
| Gene3D | 2 | 53 | 52 | 2.7E-8 | ||
| ProSiteProfiles | 2 | 165 | 164 | 27.371 | ||
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 538 | 522 | - | – | |
| Pfam | 51 | 145 | 95 | 1.5E-32 | ||
| PIRSF | 52 | 341 | 290 | 7.0E-82 | ||
| Gene3D | 54 | 172 | 119 | 2.0E-41 | ||
| Gene3D | 175 | 494 | 320 | 9.7E-106 | ||
| SUPERFAMILY | 179 | 462 | 284 | 4.42E-73 | – | |
| Pfam | 190 | 341 | 152 | 8.7E-60 | ||
| CDD | 191 | 436 | 246 | 1.17757E-78 | ||
| PIRSF | 337 | 508 | 172 | 1.6E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Asparagine synthase (glutamine-hydrolyzing) activity | Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate. | ||
| Biological process | Asparagine biosynthetic process | The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid. |
Expression pattern of LotjaGi6g1v0088100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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