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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0088100 |
| Transcript ID | LotjaGi6g1v0088100.7 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:17798480..17804568) extracted from Lotus japonicus Gifu genome v1.2.
CGTTTTGGGCCAACAAGACTATACCAAGATACTCCAAGATATATGATGCACTATTTTGTGGTATGATTGATTATACTAAA ATGAAACTGAATCTTGTTTTTGTTTTTGGTCACAACATAAGAGAATCTTCTGACAATCAGTGAGAATTAGTACTATTATT TTAGAAAAGGAAACATCTTATATTCGAATAAATAAATACAAATAGTGAATCCTTGTATTTCATTATTCACACTCCATTCA ACTTTTTCCCCATTCTTCAGTTTCGTTTCACCTTCTTGCATATTTTGCTTTGCAGCCGCCATGTGCGGAATCCTTGCAGT GTTTGGTTGCGTCGACAACTCTCAGGCCAAACGCGCCCGCATCATCGAGTTATCTCGCAGGTCTCATTCACATTTCTATT ATCTCTTTCATTTCTCGAAACATGAGTTTTCATTTGAATATATATAAACAATAATGATACACTACCTTTTCATTTGTGAT TTCACTTCATGCATGCAACAACAACAACAACAACAACAAAAACCCTATTTTAAACCATTTCGCTTTATGCAGCAGCTAAT TGTGTTTTTTTTAAAGGGTTTATTTGTTTGATGCTTGGTTATCTAATGTTTATTAATTAGTTTTTTTATTTATTTTTTGG TTCTGATTTGTGTGTGGTTGTGATGAATTTGGAAAATGTAGGTTGAGGCATCGAGGTCCTGATTGGAGTGGCTTGCATTG CCATGAGGATTGTTACCTTGCTCATCAGCGTCTCGCTATTATCGACCCTACTTCAGGGGATCAACCTCTCTACAATGAGG ACAAGACTGTTTTTGTCACTGTATGTATCTTTCAGCCCTTTTTGAAGAAAAATGTTTGATTTACATGCATGATTGAGATG TATAAACCCCACATTCACAGGAAGAGTGATAAAGAAAGAATCACAAAAGTTGGATAATGCGGGCGAAAATTTAACACAAT AAGTAAAATTATAGTCAGTAATTGGAAAAGGTAGTGTAAAAATTTTACGAGGGTAAAAATAACATTTGAATACTATTTTA TTGCGGAGCGACTCCTATTTTGTCACTATGTTGGTTCGTCCCCTGTATATGATATGATGTAACAGGAAGATAATGAGAGT GAAGGTATAAAAAAAATCAGAATTGTTATTTTATGATAATATAATTTATATGCATTTTTTGGATTATTCATTTCACTAGA ACATGCATTGTTTAGCTGGAAGTGCTTAAAAGTTAAAAATGGATGCAGTTTCATGAATAGTAAGCTTATAATCTATGGCA TGGTCTAGTAATTAGTCTAACAACCTAGGAAATGGGATTTTCCTACTAGACCAAAAACTCCAGTACTGCATTGTTGAACA TGAGTGATACTTTTCATTTTTGGATCTCTATCATTTTTGTTGTTTTCACCCTTTAATTTCTGTGACATGTACTGAACTTG TTTCTAGATATTTTGCTTATCACATACCTCATATTTTGCTGCTGAAACTATGGCATTAGGTGAATGGGGAGATATACAAC CATAAGGATTTGAGACAGACACTGAAGTCCCATCAACTTCGAACTGGCAGTGATTGTGAAGTGATTTCCCATCTTGTAAG TGTTGTAGAATCAGTTAGATTTGGTAATCAACTTACTATTTTCCCATAAATGATGAGGATTTTCTATCGTTGTAATTCAT TATCATGACAGTATGAAGAGCATGGAGAAGACTTTATTGATATGCTGGATGGAATGTTCTCCTTCATCCTTCTTGATACT AGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGCTGGGGCCATGATGGTATGTG GCTTCACCATCTTCTTTTTGCTGAAACATTTTACATTCCATTTTACATTCAACCTCTTGAATTTAGCTATCTGTTCTTCA ATTTAAGTGAATTCAAGAGACGCATGAGTTTGTATGTTGTGGTTTCGGATATACTAATTGTATTTTCAATAAAGTGGAAT AATAATGAAACGTGTCCATGACTGTGGCTTGAAACCTTCATCAACTAAACTCTCAGCTTTATGCAGGAGATCCTGTAAAA GTTGAGTGTTCCAACATGCATTTTCGCTTACAATTTTAGACACCTGAGTTTTCGTGGTATAAATTTTACAATGAAATTTG ATAAGTGGCTAAGTTCGTATCGTATAGATTAATGCTAAGTTCTCCACTGAATATTCATGCAAGCATTAGGACGACTTTGT TAATCAACAAGCGGGTTTACATTTTGAACATGTTCTAGCTAGTTTTCCTATGGAAAATAAATGAAGCATCTCTTTCTCTC TCTCTCTTGCACACATACACACTCATCTTTTTTATTCTAGAATACAAAATTTTGGTTTGTATATTCACTTGGATCTACAC GGCGTTCTTTCTGCTGTAACTCTTGATGGTTTACTTTTGTATTTTTATCACATGAATTATGAAGATATATTATATATGGA AGTGCGATTTATTTGCAGGATCAATATGGTTTGCATCTGAAATGAAAGGTCTGAGTGATGATTGTGAAAGATTCATATCT TTTCCACCGGGGCATATATATTCCAGCAAACAGGGTATGAATGATACCATTTGTTCAGTTATCTATTTATATCTTGTAAT TCCCATATTTTTCTAATACCCATTTTCTGTCTAAATGTTTCATTTTAGATCTTATACAATCCCTTATGTTTCCTGTTAAA ATTTGCTCTATATGCAGGAGGATTAAGAAGGTGGTACAATCCGCCATGGTTCTCAGAGCATATTCCTTCTACACCTTATG ATCCAATGATTTTGCGTCAGGCCTTTGAGAGGGTAAGCTGCCATTGTATTATCTGCCTACTTCTTTCATCACTTCGAGAT GTTTCTTCCCAGGGTAGAAAATTTCAGTTCCAGTGAATTTGCTTAAAAATGCTTCAGACTTGCTGGCTTGCTGCTGCTTG CCCGGAAACTTTAGAGGGTTAAAACTAAAACCATTAAACTTCAGGAAGAGGCATCACAATAAATTCAGGAAAGTCATGCG GTAAGCAGGGGTTAAGAAACCAAAATGCACCATGAACTGAGACTTGCCCTTCTGTGGAAGTATACTTAACCTCTACAAGA ACATAAGGGCATCTTAGGAATAGTGCATCATCAGTGTCTGTTGAATCTGTGAGGTCAAAGTACTGAATAAGGGGTTGCAA GGTGTTAGTTGTGGAAGATTTATGAGTTGCAAATTCAAGAGGGCTAATATTACTATGTGCTAGTTTGTGGATGGGATTGC TCGTTTTGTTCATTTTTAGTGACTTCTATTGTGTGGTGGAGTCATTCTAACAGATAGCATGACTTCTTATCATAAAATCT CTTTTATGTCTTCTTTTACTATGATATGAACAGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTT GTCTGGAGGATTGGACTCATCACTTGTTGCTGCTGTGGCCAATCGTCATTTGGCTGCATCTGAAGCTGCTTGCCAGTGGG GATCGCAGTTACATACTTTTTGCATTGGTTTAAAGGTAATAATTCATTCCTCATTCATCTTCAACCTCTGAAACTAGTAT ATGAGCATTAATATGCTTCATGATTTGCCTTTACCCCCATTCAGGGGTCCCCGGATTTAAAAGCTGCAAAAGAGGTAGCA GATTATCTAGGTACTTGTCACCACGAACTGAATTTCACTGTTCAGGTAACCGTTTCTCTTTAGGTCTTCATATTTTTTTT TCAAACATGAGATTTTAATGGCTACTCTTAAGTGATGTTCTGTTTTTGCTATATCAGGAAGGTATAGATGCACTTGAAGA AGTCATATACCATATTGAAACATATGATGTAACGACTATCAGAGCTAGTACTCCAATGTTTCTGATGTCCAGAAAAATTA AATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCA CCTAACAAGGAGGAATTTCACGAAGAAACGTGTCAAAAAGTAATATAAAATAATTGTTATGTTCTTATAGTTTGATTTAC TTTAATTTGCAGAATATTGTGTTTTAGCATGTTACATTCCCTATTTATCTCTTAGTTCCTTGTGTACGTTTAAGTTTTTG ATGCTTTTGATGATTTGGCAGATTAAAGGTCTTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCATGGGG TGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATTGGTAT TGATTTTGTGAACCTTGCAGCTAAAGCTAAACAAATGTCATTTTTCAACTTCTTGATTTAGTTTGAATGCTTAAGTTTGC TACTTTTGGTTATCCTGTATTGTGATTCTTGTTGCATGTCCCATATGTATTCTTTAAAGTGAAGCAAATTCCTAGGCATA TGTTTTTCTTAACGAATAAAGCATGTGCATATGGACAATTATAAGTTAGTAATTGTTGATGTCGCATATTAACTAGAGAT ATGGTCAAATAACTGCTTATAAATGGAAGTGGAGTCCTCTACCCTGTGTAGAGTTAGGCCTAACCTGAATTCTTTTTTTT TGAAATGAACCTGAATTCTAAGACTAAGAAATTGGTTTTATGGGCATGTGAAGTTAATTTATTGTTGGTTTCAGTTTTTA ACACATCATGAACTTTATGACAAATTTCACAGATAAAGCCTGATATTGGAAGGATAGAAAAGTGGGTATTGCGCAATGCA TTTGATGATGATAAGAATCCATATTTACCAAAGGTTTGTTTTAACTTCTGCTTCATGCTTATTCATTTATCTCTTGAAAG ATTTCTGAAATAAATTTTTTTCTTCATTTTTTAGCACATATTATACAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGCT ACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTAGGCACTAACTTGTTTTGCTGAACTTTCTTTTTTGAT GCAATGCCACAATGTTTAAATTAATATTATGGATCCATTTGAGAATAATATCCTTGATTTCTGTCATTTTTTCTCTTGAT AAATGTCCAGGTCACAGATTCAATGCTGAAGCATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGAT ATCTCTACCGGACAATTTTTGAGAAGATATATCCAAAGGTGGACTTTATAGTTTTGTTTTTTGATAAAAATTGCATATTT ATTCACTGTCATGTGTTGTGTCTGTTCATGAGAGACCATGGTGCAACTAATCAGAGAGTAGTCTTGTTATTTGATTTGAT TTAGTCTAAGATGAAATTGATCCAACCATGTGGATTAGCTTAAATCATAGTGAGCAAAAGCAACTTCCCATGGCTTTTGT GGTTGTGCGCCGTCACGGTAGTTTTCCGTGCATCCAAACATGCACTAATGTTTTCCCACTATCAACTTCGACACCCAAAA GCTTCTCTAACATTCACTAAATCACAAGTCAGTGGTTCAATTTTTTTCTAATATTTTATCTATTGGTTTTGATCAAAATT TTTCATGAGTTTTGATGTACTCACACATCTCTTTCTCTTCCATTTTATTTCTACTCACTTTGTTTTTATCAGATCATAAT TCATACATCATATCTCTCATTTCTCCTTCTTTTATTCTTCTCTGTCTGTCTCTTGGGGTGTGGGTGTAATGAGTGTGAAT GAATTATTATTGTTGTCATCTTAGTTGATATTAAGAGCTTTTCCACCCTAGCCTCACATTGTAATTTGCACACAAATTGA TTGACTTGTTTATAAATTTAAAATCTTGTCAAATCCTCTTTCTAATGATGTTGAATCATTTGAACAGAATGCTGCTAGGC AAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAAAGCTGTGGAATGGGATGCAACTTGGTCCAAAAATCCT GACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGTATGCAGATGCACCATAATAACCGAGATCAATAACGGG TCCATCTAA
CDS sequence (LotjaGi6g1v0088100.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCGGAATCCTTGCAGTGTTTGGTTGCGTCGACAACTCTCAGGCCAAACGCGCCCGCATCATCGAGTTATCTCGCAG GTTGAGGCATCGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGAGGATTGTTACCTTGCTCATCAGCGTCTCGCTATTA TCGACCCTACTTCAGGGGATCAACCTCTCTACAATGAGGACAAGACTGTTTTTGTCACTGTGAATGGGGAGATATACAAC CATAAGGATTTGAGACAGACACTGAAGTCCCATCAACTTCGAACTGGCAGTGATTGTGAAGTGATTTCCCATCTTTATGA AGAGCATGGAGAAGACTTTATTGATATGCTGGATGGAATGTTCTCCTTCATCCTTCTTGATACTAGAGATAAAAGTTTTA TTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGCTGGGGCCATGATGGATCAATATGGTTTGCATCTGAA ATGAAAGGTCTGAGTGATGATTGTGAAAGATTCATATCTTTTCCACCGGGGCATATATATTCCAGCAAACAGGGAGGATT AAGAAGGTGGTACAATCCGCCATGGTTCTCAGAGCATATTCCTTCTACACCTTATGATCCAATGATTTTGCGTCAGGCCT TTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTGGAGGATTGGACTCATCACTT GTTGCTGCTGTGGCCAATCGTCATTTGGCTGCATCTGAAGCTGCTTGCCAGTGGGGATCGCAGTTACATACTTTTTGCAT TGGTTTAAAGGGGTCCCCGGATTTAAAAGCTGCAAAAGAGGTAGCAGATTATCTAGGTACTTGTCACCACGAACTGAATT TCACTGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATATACCATATTGAAACATATGATGTAACGACTATCAGAGCT AGTACTCCAATGTTTCTGATGTCCAGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGA AATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAGGAATTTCACGAAGAAACGTGTCAAAAAATTAAAG GTCTTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGAT AAAGAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATTGATAAAGCCTGATATTGGAAGGATAGAAAAGTG GGTATTGCGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTATACAGGCAGAAGGAACAGTTCA GTGACGGTGTTGGCTACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTCACAGATTCAATGCTGAAGCAT GCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGATATCTCTACCGGACAATTTTTGAGAAGATATATCC AAAGAATGCTGCTAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAAAGCTGTGGAATGGGATGCAA CTTGGTCCAAAAATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGTATGCAGATGCACCATAA
Protein sequence (LotjaGi6g1v0088100.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCGILAVFGCVDNSQAKRARIIELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIIDPTSGDQPLYNEDKTVFVTVNGEIYN HKDLRQTLKSHQLRTGSDCEVISHLYEEHGEDFIDMLDGMFSFILLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASE MKGLSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFSEHIPSTPYDPMILRQAFERAVVKRMMTDVPFGVLLSGGLDSSL VAAVANRHLAASEAACQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTCHHELNFTVQEGIDALEEVIYHIETYDVTTIRA STPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCQKIKGLHLYDCLRANKSTSAWGVEARVPFLD KEFINIAMDMDPEWKLIKPDIGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHADKQVTDSMLKH ANCVYPENTPTTKEGYLYRTIFEKIYPKNAARQTVPGGPSVACSTAKAVEWDATWSKNPDPSGRAALGVHAAAYADAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 555 | 555 | 0.0 | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 555 | 555 | 0.0 | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| PIRSF | 1 | 361 | 361 | 5.7E-110 | ||
| SUPERFAMILY | 1 | 195 | 195 | 1.63E-55 | ||
| CDD | 2 | 192 | 191 | 5.45742E-80 | ||
| TIGRFAM | 2 | 367 | 366 | 5.6E-110 | ||
| Gene3D | 2 | 192 | 191 | 2.5E-65 | ||
| Phobius | 2 | 11 | 10 | - | – | |
| ProSiteProfiles | 2 | 185 | 184 | 36.654 | ||
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 558 | 542 | - | – | |
| Pfam | 48 | 165 | 118 | 1.9E-41 | ||
| Gene3D | 195 | 514 | 320 | 1.1E-105 | ||
| SUPERFAMILY | 199 | 482 | 284 | 4.89E-73 | – | |
| Pfam | 210 | 361 | 152 | 9.3E-60 | ||
| CDD | 211 | 456 | 246 | 5.73128E-79 | ||
| PIRSF | 357 | 516 | 160 | 1.9E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Asparagine synthase (glutamine-hydrolyzing) activity | Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate. | ||
| Biological process | Asparagine biosynthetic process | The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid. |
Expression pattern of LotjaGi6g1v0088100.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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