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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0092200 |
| Transcript ID | LotjaGi6g1v0092200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR protein; TAIR: AT4G05460.1 RNI-like superfamily protein; Swiss-Prot: sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23; TrEMBL-Plants: tr|A0A1J7GM44|A0A1J7GM44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0092200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:19932376..19937124) extracted from Lotus japonicus Gifu genome v1.2.
ATCACAGCATTCATTACCTCCACTAGTATTTCCTGACAAGCTATTTGTTCTGCCAAATAGTGTTACCAAATACCAACAGG CAACAGATCAACGTGTGTTGTAAGTTTTACCCTCACCAAGTCTTTTCATTTCAACTTGAAAGCCCGGTTAGGTTACAATT CCTTTTTGTTCATAAAAACCTATCCATCATCATTTAACAAATTTTACCAATCAACTTAATTTGCAGGATGGCAGAAGAAG AAAGGCCTGCGAAGAAACCCCAAGGCTCTAGTGATCGCACAGAGCCAAACAAACTTGGTGAAATGCTTCAACTGATTCCT CGAGAACTCGCTTCAAAGATTCTCAACAAGCTTGGTGCCTTTGAAATTTTCCCCACTGCAAGCTTAGTGTGTCATTTTTG GTGGAAATTATGTATCGACCCTCTCATGTGGCGCACCATTGATCTCACCAGCCACCCTCGTGTTGGACATGCCAAATTGG AGAAGTTTTGTCTCCGTGCCATTCAACAAAGTTCTGGTCATTTACAAGACATTAGTATTAAAGATATTGCCACTGACGAT ATTCTCAAATCAATTGCTGATAGGTAATTATTCTCATCATTTTTCTTTTTATTTGCTTAATTTAGTTCTGTCGAACAACC AATTATCCTAAAAGCTTAAGCGGGTGGTAAGGGTCACATGAATAATTATTTTATAGAGGCTCTGGTACCATGTTAAATAA CTAATTATTCCAAAAGCTTAAGCTATTAGGTAAGGTCGTAAAGGTCACATGAATAATTTTATATTATTATTTCTTACAAA TTCCATGTTTTATGATTACTGATTTTCGCTCATTTAGTAAAATTTGAGTTAGGACTCAACATTGGGTAGTGCTGAAAGTT TCATAATTTTGTTTAAAGCATGTTTCTTTGTATGTTTTTACAGCGGAAGTCACTTACGGCGGTTGCGTCTTTTGAGATGC TGGGAAATTTCGGATGAACAATTGGATGAGGTTGTGAAGAAGCTTCCGCGGTTGGAGGAGTTTGAAATTTCGGTCAATAT CATATCTAAGGATACTTTGGAACTCATGGGAAAATGTTGCCCGCATTTGAAAGTGCTGAAATTTAACATGAAGGAAATTA AAGGCGAGGAGTGTGATGATGAGGCATTTGCTATTGCGAAAACCATGCCTCAGCTACGTCATCTCCAACTTCTGGGAAAC AGGCTCACTAATAAAGGCTTGATTGCCATTCTTGATGGATGCCCTCGTCTTGAATCTCTTGATCTGCGTGTTTGTTCTAA TGTCAATTTGAGTGGAAGTTTGAGGGAAAGGTGTTGTAAGCAGATAAAGAATTTGCGTTTTCCAGATGACTTGAGCAGTG AAATTTCCATCTACGTTGAAGGTGGTGCTGTTGGTTATTATGAATTGGACTGTGGATGTGACATTGACCAGGCCAATTAT GAGGCCGAGTTAGAGGCGTATCAAGATGCAGTCTGGGCTCAATTCGATAATGATAGGGACGATGAATATGAAGAATTCCT TGACGCTCACTACCTTGAGCTATTATGATTAATGTTTTAGTTAAGTGATCCTATGTTCTTTTTGGATATGTTGATCACCT GCAGGTACAGGTACAGGTACTGTTCTATATGACATTTATGTTTGGATTTAAGTGGCTCAATGGTTGTTCTAAATGCCATG GTTCTTTTACTTTTGTAGTGTCCTAGGATTCTGATGACTGGTTCACATACTTTGTTAACATGGCTTAAGTAGTATTTTGT TTTTGTTGTCAAATCTCTTTGGTTTCCAAAGTACTTTTGTGAATCAGTTGTGACAAAATGACTTATGAGCTTTGAGCTGT TAGCCTGTTACTGATATTCATACCTATATTGGATACTTTAGCAATTAGATATTAGTGTTGTGTATCCTTTTAGTGAGCTG TTAGCCTATTATAGGTATTCGTTACCTATATGGGATTGCTTACCTAAATTCTTGATGTGTTAGAATTTATCAGTTTTGAT GCGTCAAATGGATGAGGTGCTGTTTTGATTTCCATTTCTTGTTTTAATACTTTAAGCTTCTAATTTATATACACATGTAT TATCCTTTTGCACTGCTAGCCTTACTGTGGAAATTAATTTGGTTTTTCCCTTGATTTTGTTTCTAGTTTGTTCAGGTTAA TCATAGAAGCAGTTTAATATTTTTTTGTTTTTGACTAACTGAAGCTGTTATATAAGCCCCTTTATGTTTGACTTAATATA TTAATGTAGTGCTGCAAGATAGGATTGAATTAAAACAATTTAAGAATCACTCATTTGTATTCTATGACACCTTGTTGTTC TAGATAGCAGTACGTGGAAAGAATGAATCAATAGAATTTAGGAATCATTTATCATTCGAGAACATTGCAAACTATTAAAT ATAGGAATTAAGTAACTATGTCAATCAGAATAGTAGTATTTAAATTACAATTGCTGATCATTGCCTTTGAATTGACTTAT TTCATTCTTATATTGTTAACACCTATGTGATTAGCACACTACATTACATGATTAGATTAATAAATTTAGGAACTAATCTT TGTTATCTAATATGACAGAATTGAATTAAAGATACTCTTTTTATTTATGTAATCTAATATGTGGTGATAGTGTGATACAC GACAGAATAGTAACCAAGTGCTACTTTAATTTTAATTTCTTTATACCTATTTGGTGTGCTTGAGTTGTCGTAAATTGGAT ACACCCTTCTTGCTTGCTGGAGGTTTCGTGCCTACATAATAAACGTTACCTTCTTGCTAATTTCTCCATAGTAATCGTAA CATTGATTCGTGTAATCTGTTGTGTAATAAGATTAACCTTGATTCATGTGATTGATGCATAGTTAGCTTTGCCTTGCCTT GTGTTTAATTGCTGCACAATAAGCTCAGTTTTGCTTGCATTGCTCTGCTGCATAATTTACCAAATTCTTGGTAAGGTGAT ACTTTGTTCATGACACTAATGCGTGTTTGAAATATTTTTTGTAGAGCATTCTTTTCGATTAAGCCCTTAAGCTCATATAC ATTAAAGGACTTGATTATGACATTAATTAGGATTGTCATGAGTTACCAATCTAACTCCTATTCCTTCTTGTGAGTTGTGA TGACTGAAGAGTATAAGAGGGAAGAGAAAACTCAAAAGTTTTCTACTCATTTTCCATACTCAATTGAAGCCAGGGGATGT GCATATCAAATGAACTGTTAGTTTTCATTATTGACAGCAAGTTAGTCTTAGTTACCTTCGACTGAATCTGATTGAAAGAA ATATTGATATGAAAGTTTCTCTTTGGCACAAAAATTGAATGAATGCACTATTTACTTCCATTGTGCCTATGAATTGTAAA TATTTTGAAATTGTTTTATTCATGGAAAGCCTATGTACGTTTGAGGGACTACCTTCCAATATTTAGTTACATTTCGCAGA AGAATTAGATTTTTTCTCATGTAAAATGATCATGTATAACAACATAAAGACAATGGTTTGAAGGATTATGAGTTGGTTTG AGTCACTTTAATAATCTATGTGCTTTAATTTCATTGTAGAACTCATTTTTGCATGTTGTCATGTTGTCGAATATTCTATG TTGTGCCATACATTACTTAAGCTAGACGTATCGTAATTGGGTTCTATTTGTTATGTTAGGAAGCTAATACACTAAGATTT AAAATGGTGTTGATCTCAGATTCAGTCACCTTACCAATTAATCCCAGTTTTAAATCTGAATCTGGTTTTTATTCTCCACT ATAGCATGTTAATTGTTTGGCAGCATTAGTAGCTTCATGCATAAATTGGGGTAGAAACATGAGAATTGTGTGATGTTTTC TTTGTTGGACCTGACATGCATATTTTTCAACCCACAAAGTTTCAGATTTTTTCTACTTCTCATGCAATACCAGATTTTAC TCAAAGTCAGTATGACTATGCATGCTCAAAATTTTGACAGCATTCATTTAAGCACAAGTTGACTTGTATTAATCCTTTTG ATGCAAGACCTATCCCTCCCACTAGAATGATTACATAGACTTACCCTAGAGACAGTTCAGTATGGTACAAGGGTTTTGCA TATCACGGTTCTAAAGACATACATGAATTGATGTCAATCTTGTTAAGGTAGTGAGTGAGCTGACACTCTTATGTTTGCAT AAGGATCTGTCCCGGATCTATATATATAATTTTATTTCTTTATTTTGTATGATAAAATGACTTTAATCTTGATAAAAAAA ATTATTGCTAGTCATTTGAGAACAAAATTCAGTATTTTAATCATGGGATCAGAACTGGTGTTGGTTTCTCAAATGTCACT GACTACCTAAAAATGTTTTGTTTTTGCTATGCTGGAATTTGCTCATTGTTACTTGATTATTGTAAGTAATGTGACTCTGT AGTATCTTCATATCTCCCTCATTTGATATTTTGATTTAGAGCAAATCTTGATAGACGATGAAGCCTGTATTGATGAACGT TGGAGCTTATACATTCTGAATAGACGTTATTGTGGCTTTGCATCTTCGTATGTTTGTTTATTTTCCTTGAGCTTTCTTCT TTCCGTTGCTTGATCTTGTAGATGATTCTTCAAATGATGTGATTTTTGTAGATCTTGATTTTGCTTTTTTTGATTTCTTT ATTTGATGTTTTGTATACTATTGAATAGACTTGTAGCTTCGTTGTGCAGCACAGTGCTATCGTCCAGATCTGATGCTTGT TCAGTGCTTATATGCGATACTGATGGATC
CDS sequence (LotjaGi6g1v0092200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAGAAGAAAGGCCTGCGAAGAAACCCCAAGGCTCTAGTGATCGCACAGAGCCAAACAAACTTGGTGAAATGCT TCAACTGATTCCTCGAGAACTCGCTTCAAAGATTCTCAACAAGCTTGGTGCCTTTGAAATTTTCCCCACTGCAAGCTTAG TGTGTCATTTTTGGTGGAAATTATGTATCGACCCTCTCATGTGGCGCACCATTGATCTCACCAGCCACCCTCGTGTTGGA CATGCCAAATTGGAGAAGTTTTGTCTCCGTGCCATTCAACAAAGTTCTGGTCATTTACAAGACATTAGTATTAAAGATAT TGCCACTGACGATATTCTCAAATCAATTGCTGATAGCGGAAGTCACTTACGGCGGTTGCGTCTTTTGAGATGCTGGGAAA TTTCGGATGAACAATTGGATGAGGTTGTGAAGAAGCTTCCGCGGTTGGAGGAGTTTGAAATTTCGGTCAATATCATATCT AAGGATACTTTGGAACTCATGGGAAAATGTTGCCCGCATTTGAAAGTGCTGAAATTTAACATGAAGGAAATTAAAGGCGA GGAGTGTGATGATGAGGCATTTGCTATTGCGAAAACCATGCCTCAGCTACGTCATCTCCAACTTCTGGGAAACAGGCTCA CTAATAAAGGCTTGATTGCCATTCTTGATGGATGCCCTCGTCTTGAATCTCTTGATCTGCGTGTTTGTTCTAATGTCAAT TTGAGTGGAAGTTTGAGGGAAAGGTGTTGTAAGCAGATAAAGAATTTGCGTTTTCCAGATGACTTGAGCAGTGAAATTTC CATCTACGTTGAAGGTGGTGCTGTTGGTTATTATGAATTGGACTGTGGATGTGACATTGACCAGGCCAATTATGAGGCCG AGTTAGAGGCGTATCAAGATGCAGTCTGGGCTCAATTCGATAATGATAGGGACGATGAATATGAAGAATTCCTTGACGCT CACTACCTTGAGCTATTATGA
Protein sequence (LotjaGi6g1v0092200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEEERPAKKPQGSSDRTEPNKLGEMLQLIPRELASKILNKLGAFEIFPTASLVCHFWWKLCIDPLMWRTIDLTSHPRVG HAKLEKFCLRAIQQSSGHLQDISIKDIATDDILKSIADSGSHLRRLRLLRCWEISDEQLDEVVKKLPRLEEFEISVNIIS KDTLELMGKCCPHLKVLKFNMKEIKGEECDDEAFAIAKTMPQLRHLQLLGNRLTNKGLIAILDGCPRLESLDLRVCSNVN LSGSLRERCCKQIKNLRFPDDLSSEISIYVEGGAVGYYELDCGCDIDQANYEAELEAYQDAVWAQFDNDRDDEYEEFLDA HYLELL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| Gene3D | 9 | 69 | 61 | 9.0E-7 | – | |
| ProSiteProfiles | 24 | 71 | 48 | 9.259 | ||
| PANTHER | 30 | 287 | 258 | 1.7E-75 | – | |
| PANTHER | 30 | 287 | 258 | 1.7E-75 | – | |
| Pfam | 30 | 73 | 44 | 1.9E-5 | ||
| SUPERFAMILY | 54 | 256 | 203 | 8.44E-21 | – | |
| Gene3D | 70 | 263 | 194 | 4.0E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0092200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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