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LotjaGi6g1v0095600.1

Overview

Field Value
Gene ID LotjaGi6g1v0095600
Transcript ID LotjaGi6g1v0095600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT4G24740.1 LAMMER-type protein kinase AFC2; Swiss-Prot: sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2; TrEMBL-Plants: tr|G7J352|G7J352_MEDTR Kinase AFC1; Found in the gene: LotjaGi6g1v0095600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:20582083..20586527) extracted from Lotus japonicus Gifu genome v1.2.

CCTAAACATGACCCAAGGGGAGATTATGACCTTCATTAAGGTCAGCAAATTCAGAACACAAACCACATTCTTAATTTCAA TAACGACATAAAATGGATATAGAAATGAACGGTCCAGATTCAACCATGACAGGAAAATCGAACGACATAGAGACGACTGA GGACGAGGAATGATGTTCAGGGTCTGATTCGGTTGTGACAAACAAGCAAAAGAAATAGTTCAATTCAATCAATCGATCGA TCGAATTGGGATTAGGGTTCCTCATTCGACAGAGATGAACTACGGCTACACTACAGAATTTCCGACGGATCGGCGTCCCC GGAAAAGGGCTAAATTGGTTTGGGATCTTCCTCAGGGTCAAACCCTCCCAAAGGTAATAACACCTTTCAATTTCGTTAGT TTTTTTTTTTAATTATCCATTCTGGGGGGAAATCCATCATGATTTTATTAAAAAAAATAGATCTGCCCGTTTATTTCTTG ATAATTTCAAATTTGAGTACTTTAAGGTTTGCGGTTCGATGATAGATTTGGTAATTAGCTTAAAATTAATTGGCTGTTAA TTTTGTTCAAATGTTATATTGAATCTATTTTGTTCATATAGCATAATTTCTTTGCTTAAATAACTTTTGAGATAGATGTC CGTTTCAATGATTTTATAAGTGGAAAATTGGGGATGGGGATGCATTTTTTAATATTGTTTCTTAATCTTTAGTGTAGTAT GAGTAAGTAATTTAATTCTGTGTAGGCTCATTCGGGATGGTATTGTGGACAAGAGGTTCCTAATGTGGCAACAAGCAATG GAGTGCCACGGGTACAACCTGACCATGCTGGTCTTTTTGTAAATGGATATGCAGAAAAAGGCTCTCCCCAATGGCGAGAT GATGACAAAGATGGACATTACATGTTTGCACTTGGAGACAATTTAACATCTCGGTGTAATGCATTTAGCCACCATCAAAG AGCTTTTCTAAGTTTACTATTTTTGTTAGATATTCTTATGCTGCTTGCTCAATATTCTAATATCCGTTAGTTATATGATT TTTGAGACTACTTCAATGATAAATTTCAGAGGGATAATTATTTTCTCATTTTTTGAAGAAAGGATAAATTCTTTTGACAT GCATGTTCAAAATGTATATTTGAAGTTTGTTTAAGTTGCATGATTACTTTATACTTTTTTACCCTAAAATTTACTGCCCT ATCTTCTTCAATCCACATCTTTTTTTAAACCTTCCTGTGTGCTTGTGTTAATGTAAGAACTGAAAAGATCCTTCCCTATA GTTTTTCTTCTCATATTTGCCTATTAAAATATTTCCACTAATGTCCTTGCGAATCTTGACAAGTGATGAGTTGTTTTGAA TTTCGATGCCTTGATTTGTATACATTTTTTATTTCGTCTAATCATTATGTCTTTGTTTCTATACTTGCAGATAAGATCCT CAGGAAAATTGGTGAAGGTTGTTATTACAATTATCTTGTTTACTTCTTTAAGCATTGTTTTGTTTATGGATTTTGAGTCC TATCCTTATGCTATCTGTTCTATGTTTGAAGGGACTTTTGGTCAGGTTCTAGAATGCTGGGATAGAGAAACGAGGGAGCT GGTTGCCATAAAAGTTGTGCGTAGTATTAAGAAATATCGTGAAGCAGCAATGTTAGAAGTTGATGTGCTCCAATTGGTTG GGAAGTATGACAAGAATGGCAGCCGGTAAGTTTGTTTTCTTTTATTATTCTGTATGTAATGTACTACTGGCTATGAATTG AGGTTTGTGCCAGTTGTTAAGTCATTTTATCATATGCAGCTGTGTTCAAATACGCAACTGGTTTGACTACCGTAACCATA TTTGCATTGTGAGTATCTAATTGACATATGGTGAAATCATTTCCAAACTTCACAAATATTTCTGGGGGATAAGACTTGTC AGTGAAATTTCAATGGTCTTAACAGGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCGGAAGAACAATTATC GCCCATTTCCGGTTGATCTTGTCCGTGAGCTTGGCAGGCAACTGTTGGAATGTGTAGCATGTACGTAATTGCTTCTTCCA CTGTTTCTATTCTTTCCAAACTTTGTGGCAAAAGTCATATAAATGGCACTGTTCTCTCTTCTTTAGGGAGTTATGATGGT TACTTTGGGATTTATTCAGTAAAAAAAGTCAACTGGTCACTTATTTTTCCCAACAGTACTTTTATAACTCTTTTTGAATC ATTTAAAACCATTAGACTATTGTGGATGGTTAGAGATATCTCACTCCCCATGACAGTTGGAAAAAAAAAGGAGGAAATTG TTCAATTTTTTTATAATACCTGTGTTGACTGTGTTTCGAAAATTGCAGTCATGCATGATTTGCGCCTCATCCACACAGAC TTGAAGCCTGAAAATATACTTTTTATTTCCTCAGAATATGTAGTTCCTGACTACAAGGTATTTCTGCTTTTTTTTTGGTG TTCAAATTTTAGAATTTTTAGATTATGTTCTATTTTTGTGTGCTAGTGGCGCAATGGTTCTGTTTCACCACATGCCTAAA CGTTTATCTATATCTTAGTCAAGTAATAACAAATTTTTAAAAATTGAAGGTTACATTCCGGTCACCAAAAGATCCCATCT CTTTTAAGAGACTGCCAAAGTCAAGTGCTATTAAGGTTATCGACTTTGGTAGTACGGCCTATGAGCACCAAGGTCACAAC TATATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTCGGTAAGTTTCTATTTCTCTTCATATGCCTATGATT TTTTATGGTCAGCTTATTTGAAGTTTTAGTGTGTTTTTATGGTCAGCTTATTTCTCTTCATGTGGTTCAAAAGTAATTCT AGCTTGTTTGCTTGCTTCTAGGACTTGGGTGGAGTTCTCCTTGTGACATATGGAGTGTTGGATGCATTTTGATGGAGTTG TGCTCGGTATGTGGAGTTCCTCAGTATAGTGATTTCTAAGCTAGAAAGTTTTATCCAAGTTTACTAAATGAGCAATGTTA TGAACTGCAAAATGGTTTCAGGGAGAAGCTTTGTTTCAGACGCATGAGAATTTGGAGCACCTAGCCATGATGGAGAGGGT TTTAGGCCCTTTACCACAGCACATGTTGAAAAGAGCAGAGTGAGTGGGGCATTTCAAAGTAGTGTGTTTTTTTAATTGTT CTCTCGTGTAGATGTTTCACTTATTCATAATCTCCAACTGCTTCTTGCACAGCCGGCTTGGAGAGAAGTATGTCAGAAGG GGTAGACTGAACTGGCCTGAAGGAGCAGTCTCTCGAGAAAGCATCAAGGCAGTCTTGAAACTGCCTCGTCTTCCTGTCTG TTAATATTTTACCTGTCTAGTTCCATTTTATTTTCCTTCTCTTTCATTCTACATTCTTATGCTTGTTGTTTTAACAGAAT CTGGTGATGCAGCATGTGGATCACTCTGCTGGGGATCTTCTTGATCTCTTGCAGGGCCTTCTTCGATTTGATCCCTTCTG CAGGCTAAAGGCCCACGAAGCGCTCAGGCATCCCTTTTTTACCAGGGAGCATTACCAGAGATTTTAATATAGGGTGCGTT TCCCCTGCCGGGAATGGATTGACGTCCATTACTGCTGATATTTGCCTGGTTGTTGTATATTTTGCTATAGTGAATTGTAA TGTCTTGTAAGGGTTCTGAGTGGTGGTTCTCTTTTCTTGATATCATCATGTCAAGTGTGGGGGTTTATTTTCCCCTTTTG ATACCTAGGTTTTGTAGATATTTTTTGTGTGGAGGATCTTTTTCCATCTCCAATTTTGTACGATGGAAGTGTAATGAGAA GCGTTTTACTTATGATACAACTCTTGCTTTGACCAGCTGGCCTGATACTCGGTGATAATCATCATGCAATATGGGAGGTT CTCTTCACATTTCTATTAACACTTTATTATACTACTTTAATAAGAACATTAGTACATTGCACATGACATGACACTGCATG AGCATTCATGTAGTCAGATTGAAAAAACTATGTTGAATTATATTTAGATAGTTATAAAACTTATTCTGTGGAGGTTTCCT TTGTCAGGCCTTATTCTGGCTGGTCAGAAAAAGTAATAGAACTTGCATTAAGGTTAGGTTCACACTTTATTCCACCTACA CGAAGGGAGAGGTGAACAAAACTGAGATAAATGAGATATATGATAGTTATATGATGTGAAAAAAAAAAAAGATAGAAGTG AAAATGAGATGGAAAAGAAATGAATGTGAATGAATCAATAACCTAAACTTGTGAAAATACTAAATGGGAAGTGTAATGAT AAAGAAAATAAATAGTAGGCTTGTACCACGACATGAAATATCTGCATGTTAGGTTTTAGGTTTTAAGGTTGATAGATTTA TATTAATAACATCTAGAGAGGAATTATGAAGTGCAGCTTGTCAAC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0095600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACTACGGCTACACTACAGAATTTCCGACGGATCGGCGTCCCCGGAAAAGGGCTAAATTGGTTTGGGATCTTCCTCA GGGTCAAACCCTCCCAAAGGCTCATTCGGGATGGTATTGTGGACAAGAGGTTCCTAATGTGGCAACAAGCAATGGAGTGC CACGGGTACAACCTGACCATGCTGGTCTTTTTGTAAATGGATATGCAGAAAAAGGCTCTCCCCAATGGCGAGATGATGAC AAAGATGGACATTACATGTTTGCACTTGGAGACAATTTAACATCTCGGTATAAGATCCTCAGGAAAATTGGTGAAGGGAC TTTTGGTCAGGTTCTAGAATGCTGGGATAGAGAAACGAGGGAGCTGGTTGCCATAAAAGTTGTGCGTAGTATTAAGAAAT ATCGTGAAGCAGCAATGTTAGAAGTTGATGTGCTCCAATTGGTTGGGAAGTATGACAAGAATGGCAGCCGCTGTGTTCAA ATACGCAACTGGTTTGACTACCGTAACCATATTTGCATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCG GAAGAACAATTATCGCCCATTTCCGGTTGATCTTGTCCGTGAGCTTGGCAGGCAACTGTTGGAATGTGTAGCATTCATGC ATGATTTGCGCCTCATCCACACAGACTTGAAGCCTGAAAATATACTTTTTATTTCCTCAGAATATGTAGTTCCTGACTAC AAGGTTACATTCCGGTCACCAAAAGATCCCATCTCTTTTAAGAGACTGCCAAAGTCAAGTGCTATTAAGGTTATCGACTT TGGTAGTACGGCCTATGAGCACCAAGGTCACAACTATATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTCG GACTTGGGTGGAGTTCTCCTTGTGACATATGGAGTGTTGGATGCATTTTGATGGAGTTGTGCTCGGGAGAAGCTTTGTTT CAGACGCATGAGAATTTGGAGCACCTAGCCATGATGGAGAGGGTTTTAGGCCCTTTACCACAGCACATGTTGAAAAGAGC AGACCGGCTTGGAGAGAAGTATGTCAGAAGGGGTAGACTGAACTGGCCTGAAGGAGCAGTCTCTCGAGAAAGCATCAAGG CAGTCTTGAAACTGCCTCGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCTGCTGGGGATCTTCTTGATCTCTTG CAGGGCCTTCTTCGATTTGATCCCTTCTGCAGGCTAAAGGCCCACGAAGCGCTCAGGCATCCCTTTTTTACCAGGGAGCA TTACCAGAGATTTTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0095600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNYGYTTEFPTDRRPRKRAKLVWDLPQGQTLPKAHSGWYCGQEVPNVATSNGVPRVQPDHAGLFVNGYAEKGSPQWRDDD KDGHYMFALGDNLTSRYKILRKIGEGTFGQVLECWDRETRELVAIKVVRSIKKYREAAMLEVDVLQLVGKYDKNGSRCVQ IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFISSEYVVPDY KVTFRSPKDPISFKRLPKSSAIKVIDFGSTAYEHQGHNYIVSTRHYRAPEVILGLGWSSPCDIWSVGCILMELCSGEALF QTHENLEHLAMMERVLGPLPQHMLKRADRLGEKYVRRGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLL QGLLRFDPFCRLKAHEALRHPFFTREHYQRF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45646
1 429 429 2.6E-256 –
PANTHER
PTHR45646:SF14
1 429 429 2.6E-256 –
SUPERFAMILY
SSF56112
84 427 344 1.01E-78
IPR011009
CDD
cd14134
84 423 340 0.0 –
Gene3D
G3DSA:3.30.200.20
89 177 89 1.4E-108 –
SMART
SM00220
97 423 327 5.4E-75
IPR000719
ProSiteProfiles
PS50011
97 423 327 37.714
IPR000719
Pfam
PF00069
97 423 327 1.6E-47
IPR000719
ProSitePatterns
PS00107
103 133 31 -
IPR017441
Gene3D
G3DSA:1.10.510.10
151 422 272 1.4E-108 –
ProSitePatterns
PS00108
218 230 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0095600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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