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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0100300 |
| Transcript ID | LotjaGi6g1v0100300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methylthioribose kinase; TAIR: AT4G14200.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|A7FLL0|MTNK_YERP3 Methylthioribose kinase; TrEMBL-Plants: tr|K7L5Y5|K7L5Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0100300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21845975..21849850) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGAAGTTTGAAGTTTGACGCATGCAGTGTGACTCGCAATGGCGACGACGTGTTTCATGGTTCTCACAGTCACGGATG CTACCCCTTGACGCCGTTTCTTACCATCATTCACTTCCCTACTCTGCCAATTTTTTCCCTCTCTTGATTCTTTCCTCTGA GAATTTCTGACTTTGGATTTTCTAGCCTCATTGTTTTAGTTCTTCAGTTTTGATTCACTGCCTTAGATTCTGCCATGGAT AACCAAGATTATAGAACAACTCACACTCAAGGTGCTTTTCCTCGTCATTTCTTTTTATTTTTCTTTCTGCCATGGTCACA ATCTTGTTTCTCGAGTTGAAGATTTTTATGGTTCTTTCTTGATTTGGCAGGAGACGAGACTCATCATGTATGTCACAGAT GTGGGTGGCCTTTCCCGAATCCACACCCGAGTTCCAAACACAGCCGTGCTCACAAGAAAATTTGTGGAACCATTCAAGGT TTCAAATTGTTAATTTCAGAGTCAGAGACCCAAACTCATTCTAACGCTTCAGATGATGATGATGATCGCAACACAAACAC ACAAGGCACGTGCCATTGCTTTTTAAGATTGAATTAATTAATTAGTCTATGAATGATTCACATTATTAGAATGAGAAAAG ATTTCCATTTTTCCCAATGTGATGTTTTTTAGGGTTTGGTTGTGTCAGGTTTAAATGCCTTGGATACTAGTAAAATTGAT AAAGGTTGTGATGGATCTGGGGGAAGTTTAATTAGATCAGGTGATGAGGTGTTTTTAGATGCAATTGCAAACTTCTCAGA TGGTGGTTTGGACTCAACTTCTGATGTGGTGATAATCAATACAGAATATCCAGAAATTTCAGGGAGTTCTGAGAACAATT GTAAGTTACAAATTGATTAATTGAAATCACTTCATTGGTGTATTTTTATTTATTTTGCGTCATCTGTTAGTACTTGCGAA ATGAATATGTTTGGGGAATTAATAATTGAATTTCATCTTTATGATATGCATTTTACGCCATCTGTTAGTACAGTACTTGT ATCATTCAATATGCATTTTCTTATGTATCTATGATTTATATTCCATAGGCTAGGTTTTGTTTTTTGTATGGTTTTTTATC ATGTTTTGATTATATGTTTTACAGCTGAAGTTGCGAATGATGAGATTGAGATTGACTCAGACGAAGACATGGTTGAGATT GTGGTAGCTTTTGATAACACTTCAGTTGAAACATGTAAGGGAGTTCCTGAATTAGCAGCTAGTGATCTGGTTAATCTGAA GGATAAGAACTGTGCTGAGTTTATTTCTGTTATTCCACAAGATGAACTTCCTCTTGAAGTAAATTCTACTGTAAGCACTT TCACAAACGGTATTCAGGTAGAGTCTACGCAAATTATACAATTTGCTACTTCTGGTGATGTCAAGATGTTGCAGCTGGAA AGGGGAGAAGGAAATATGAATATGTTTACACGTTCTTCTTGTGATGATGGATCTGAAATGTCTCATCCTCAAAATGAGTA TGATGATGTTAAAGATCATGAAGCAGAGTTATTACAAAACTCTTTGAGCCTACGTTCATCGGAAGCATTAAAACAAAAGC GAGATGGTTTGAAGGGTTCTGTTTCTGAAGAAAGTCAATCGAGTGAAAAAGGAGAGATTCTTTCTTCAGCTGTGCAAGTT TTGGACGGTAGCATGAAGGGGAAGAACAATTGTAAGCTTTGGGAAGAAGAAATGCGTGCTGAAAAGAGCATTGAAGAACA AGAACCTGATGCTGAAACTAGAGCGTCTATGAGTGCTATGAAAACTGAGATGAATGAGAGCTATATCATTCACTATCGTG AGGAAGAAGAATCTGATGCTGCTCGTAGAAATTTACAACAGATAAATTTACCAAACAGCAGTTTCATTGCCGTATCAAAA GAGAAGAATCCCAGTTGTGCATCCTTTGTTGGTTCAACTAATGAAACACCTGGTCCAATTAGCACAGTTAATGTAAGTCA TCATGAGAAAAACATGAAGAACATGAATGAAGTAGCTGTGGATGGCAAGTGCACAGGAGCTAATGTTGAAAATGATAACG GAATAATCAGGATCAAAACTCTTCAAAGCAGTGAACTGCATTTCGAAGCTGAGTCAACAAGTGGTGGAATATATTGGAGT GATGATGCTTTTGAAATGGGTAGAATTGAAAAATGTGACATAACTGATGGTCAATGTATGGAAAGGCCCCTTGTGAAAGA CATCAAAGATGATGAAATCAATAGTGGTGGCAGGGGAACTATAGAATGTGAAAGGTATATTGGTTCTTCAGTTGATGATT CATGCCAAGCACAAGATGAAGAATTATTACTGAACGCTACAGAACACCTTGGTAGAAACTATTCATCAAATTCTTCTTTA AATAACTTGAACCCATTTTTTTGCCGACAACATTGATTTGATATACTTTTTGTTTTGGTTAGATCAAACAGTTGCCTCCA CACAATCTGATATTGTAAAAGCTGTTATTGATGCCGAAGATTTACCATCAACAGAAGTAGGGAGATCCAACTCAAAGGCT GCATTGGAGAGACATCACTGTGAAAATCCAGAAATGTTTGAGCCGCCATCTTTCATGACATTGGTTGAACCTGGACATAG GGTTGGTCCAGAAGCTCCTGCATCTGAAGTCCAACAACTTCCCAGTTGTACCTCTTTGCAAGCTGGTTGGTTTCCCACTA TAACTACGGTTACTAATGAGTCTCGAGGGAGAAAAAGGAATGAAGAAACAATAGCCAAGATAACAAACGGAAGCACCAGT AAGCTGCTGAAACCTCTCAAGAGTCTATCAAGTGAAGCTTCCCATGACAAGAAACCCAAGTCTCCGAAATTGGAAGAAAC TTCAGTGAATCAGAATAAAAGTGAAGTTCGAGGAAATAATGGTTCTGGTTCTGGTCTTAAATCACCTGCCACTCAAGCTG TGGAAGGAGAAGGTGTAAAAGAGTGGAGCTCCCCAGGACGAAACCCTGCAGGCAATAAGACACAAAGTAAGAAAGTAAAG AGCAGACCATATTGGTTACAATTTGTATGCTGCTCTTCTGACACTGCTTCTCAGCGAAGAGGGTAGAAGATTGCTAGCTA AGTTGTGGTGATAATACCTCGTTGCTCTTCCCTCTACACTGCTTCTTGACGTGCTGTTTTGCTATTATCTTTTCTTAGTT AATCTGCCATGGACTTAGGAATACATATTTCATCATTTGTTTTATCTTGGTCTTTTGTTAATCCTACACCCTCTTTTGAT ACGGACACAAAAGCTTTGTTCACTCTTCTGTGTTTAGAGATTAGACCGTTCAACCCCCGTCCTCACCTTTGTAGCAAGTA GATTCATGAGCTGTTATTGCCCATGAATCCGCTAAACAACTTTTATTTCAAGGGAAACCCCATGAATCAAGCAGACCTAA TGTCCAAAACATGATTTTTGGGAAGCAAATGATCTCAAGGTTGGATAAACTCAGGCTTGCTCGGTATGAGTTTAGGTAGT CAAATAGATTTCCTTGAAGATTGGTTTGCATGTGCTAGCTAAATGTAGATTCAGTGAAAATAGACAAAAAAAATCAGGGC ATTGGCACTTTTTCTTAGTACATTGAGGAGACAGCCAAGCAGCTGGTGATGGTTCTTTGAACCTTCAACTAGCCAAAGAT CAAGGAATTCTGTTGGGTATTAATTAGAAGTTGATCCTAGCATGCTGTGAATATCCAGCTGTAAAGCAAGAAGACAAATT AATGGATAGACTTCCTCAAGACACACACTAACTTATTACGTTTGATGATGTGCCTTGTCTCACACTAAAAGAAATGCAAT AAGATAACTCATGTCTTAGCTATTCTAGACTTCTAG
CDS sequence (LotjaGi6g1v0100300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAACCAAGATTATAGAACAACTCACACTCAAGGAGACGAGACTCATCATGTATGTCACAGATGTGGGTGGCCTTT CCCGAATCCACACCCGAGTTCCAAACACAGCCGTGCTCACAAGAAAATTTGTGGAACCATTCAAGGTTTCAAATTGTTAA TTTCAGAGTCAGAGACCCAAACTCATTCTAACGCTTCAGATGATGATGATGATCGCAACACAAACACACAAGGTTTAAAT GCCTTGGATACTAGTAAAATTGATAAAGGTTGTGATGGATCTGGGGGAAGTTTAATTAGATCAGGTGATGAGGTGTTTTT AGATGCAATTGCAAACTTCTCAGATGGTGGTTTGGACTCAACTTCTGATGTGGTGATAATCAATACAGAATATCCAGAAA TTTCAGGGAGTTCTGAGAACAATTCTGAAGTTGCGAATGATGAGATTGAGATTGACTCAGACGAAGACATGGTTGAGATT GTGGTAGCTTTTGATAACACTTCAGTTGAAACATGTAAGGGAGTTCCTGAATTAGCAGCTAGTGATCTGGTTAATCTGAA GGATAAGAACTGTGCTGAGTTTATTTCTGTTATTCCACAAGATGAACTTCCTCTTGAAGTAAATTCTACTGTAAGCACTT TCACAAACGGTATTCAGGTAGAGTCTACGCAAATTATACAATTTGCTACTTCTGGTGATGTCAAGATGTTGCAGCTGGAA AGGGGAGAAGGAAATATGAATATGTTTACACGTTCTTCTTGTGATGATGGATCTGAAATGTCTCATCCTCAAAATGAGTA TGATGATGTTAAAGATCATGAAGCAGAGTTATTACAAAACTCTTTGAGCCTACGTTCATCGGAAGCATTAAAACAAAAGC GAGATGGTTTGAAGGGTTCTGTTTCTGAAGAAAGTCAATCGAGTGAAAAAGGAGAGATTCTTTCTTCAGCTGTGCAAGTT TTGGACGGTAGCATGAAGGGGAAGAACAATTGTAAGCTTTGGGAAGAAGAAATGCGTGCTGAAAAGAGCATTGAAGAACA AGAACCTGATGCTGAAACTAGAGCGTCTATGAGTGCTATGAAAACTGAGATGAATGAGAGCTATATCATTCACTATCGTG AGGAAGAAGAATCTGATGCTGCTCGTAGAAATTTACAACAGATAAATTTACCAAACAGCAGTTTCATTGCCGTATCAAAA GAGAAGAATCCCAGTTGTGCATCCTTTGTTGGTTCAACTAATGAAACACCTGGTCCAATTAGCACAGTTAATGTAAGTCA TCATGAGAAAAACATGAAGAACATGAATGAAGTAGCTGTGGATGGCAAGTGCACAGGAGCTAATGTTGAAAATGATAACG GAATAATCAGGATCAAAACTCTTCAAAGCAGTGAACTGCATTTCGAAGCTGAGTCAACAAGTGGTGGAATATATTGGAGT GATGATGCTTTTGAAATGGGTAGAATTGAAAAATGTGACATAACTGATGGTCAATGTATGGAAAGGCCCCTTGTGAAAGA CATCAAAGATGATGAAATCAATAGTGGTGGCAGGGGAACTATAGAATGTGAAAGGTATATTGGTTCTTCAGTTGATGATT CATGCCAAGCACAAGATGAAGAATTATTACTGAACGCTACAGAACACCTTGATCAAACAGTTGCCTCCACACAATCTGAT ATTGTAAAAGCTGTTATTGATGCCGAAGATTTACCATCAACAGAAGTAGGGAGATCCAACTCAAAGGCTGCATTGGAGAG ACATCACTGTGAAAATCCAGAAATGTTTGAGCCGCCATCTTTCATGACATTGGTTGAACCTGGACATAGGGTTGGTCCAG AAGCTCCTGCATCTGAAGTCCAACAACTTCCCAGTTGTACCTCTTTGCAAGCTGGTTGGTTTCCCACTATAACTACGGTT ACTAATGAGTCTCGAGGGAGAAAAAGGAATGAAGAAACAATAGCCAAGATAACAAACGGAAGCACCAGTAAGCTGCTGAA ACCTCTCAAGAGTCTATCAAGTGAAGCTTCCCATGACAAGAAACCCAAGTCTCCGAAATTGGAAGAAACTTCAGTGAATC AGAATAAAAGTGAAGTTCGAGGAAATAATGGTTCTGGTTCTGGTCTTAAATCACCTGCCACTCAAGCTGTGGAAGGAGAA GGTGTAAAAGAGTGGAGCTCCCCAGGACGAAACCCTGCAGGCAATAAGACACAAAGTAAGAAAGTAAAGAGCAGACCATA TTGGTTACAATTTGTATGCTGCTCTTCTGACACTGCTTCTCAGCGAAGAGGGTAG
Protein sequence (LotjaGi6g1v0100300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNQDYRTTHTQGDETHHVCHRCGWPFPNPHPSSKHSRAHKKICGTIQGFKLLISESETQTHSNASDDDDDRNTNTQGLN ALDTSKIDKGCDGSGGSLIRSGDEVFLDAIANFSDGGLDSTSDVVIINTEYPEISGSSENNSEVANDEIEIDSDEDMVEI VVAFDNTSVETCKGVPELAASDLVNLKDKNCAEFISVIPQDELPLEVNSTVSTFTNGIQVESTQIIQFATSGDVKMLQLE RGEGNMNMFTRSSCDDGSEMSHPQNEYDDVKDHEAELLQNSLSLRSSEALKQKRDGLKGSVSEESQSSEKGEILSSAVQV LDGSMKGKNNCKLWEEEMRAEKSIEEQEPDAETRASMSAMKTEMNESYIIHYREEEESDAARRNLQQINLPNSSFIAVSK EKNPSCASFVGSTNETPGPISTVNVSHHEKNMKNMNEVAVDGKCTGANVENDNGIIRIKTLQSSELHFEAESTSGGIYWS DDAFEMGRIEKCDITDGQCMERPLVKDIKDDEINSGGRGTIECERYIGSSVDDSCQAQDEELLLNATEHLDQTVASTQSD IVKAVIDAEDLPSTEVGRSNSKAALERHHCENPEMFEPPSFMTLVEPGHRVGPEAPASEVQQLPSCTSLQAGWFPTITTV TNESRGRKRNEETIAKITNGSTSKLLKPLKSLSSEASHDKKPKSPKLEETSVNQNKSEVRGNNGSGSGLKSPATQAVEGE GVKEWSSPGRNPAGNKTQSKKVKSRPYWLQFVCCSSDTASQRRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 142 | 142 | 1.6E-119 | – | |
| PANTHER | 1 | 142 | 142 | 1.6E-119 | – | |
| ProSitePatterns | 20 | 40 | 21 | - | ||
| MobiDBLite | 58 | 85 | 28 | - | – | |
| PANTHER | 137 | 483 | 347 | 1.6E-119 | – | |
| PANTHER | 137 | 483 | 347 | 1.6E-119 | – | |
| MobiDBLite | 289 | 313 | 25 | - | – | |
| PANTHER | 547 | 756 | 210 | 1.6E-119 | – | |
| PANTHER | 547 | 756 | 210 | 1.6E-119 | – | |
| MobiDBLite | 640 | 744 | 105 | - | – | |
| MobiDBLite | 655 | 670 | 16 | - | – | |
| MobiDBLite | 673 | 687 | 15 | - | – | |
| MobiDBLite | 688 | 712 | 25 | - | – | |
| MobiDBLite | 730 | 744 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi6g1v0100300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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