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LotjaGi6g1v0106200.1

Overview

Field Value
Gene ID LotjaGi6g1v0106200
Transcript ID LotjaGi6g1v0106200.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT5G26110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q96S44|PRPK_HUMAN TP53-regulating kinase; TrEMBL-Plants: tr|I3SU70|I3SU70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0106200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:23736250..23739221) extracted from Lotus japonicus Gifu genome v1.2.

GTTAGTATTAGAACCTGCTAAAATATTGGCTTCTGTTTCCGAAACACTAAAGTTTTGGGTCTGCTTTGTTTTGAGAAAAA AAAATGCATCCTTGACTATTTAATTGGGTGAGAATAATCAAATTGTGTAAAACTATTTAAGTTCATCCTCCTCTTGACTG TTTTTCAGTGGACTGTTTCTCAAAACGGTTGTCTCTTGCTAGTTGGTACGGTGACAAGTAATGTGATTTGAGTTCATCCT CCTCTTGAGTTCACTTAAGTTTCTACTCTATACATACTTGGTGATGTTCAACTGAGATTGTTTTTTTTGCTGTTCCGTTT GTTTTCATCCGGTTCCTTCTTTTCACTCAGAATTGTAGATTTCATCTGTGTTTTTATAAATGTAAATTCCTGGCACTTTT TTCCTTGAATGCTTCTTTGGATCTTTTTTAATATAAAAAAATAGCGGGGAATTAGGCTTTTTTTTGCTGTCTGTTAAGAT GAGATTTGTGGAGTTTTAATGTTTTATTTAGTTTCGATAATGGGTGTCAACTGGGTGATGATGGGGTTTATTCAAATGGC GTTTTAGGATTACTCTGTTTGGTAGGGGAAACTAGTGTTGATTTTACTGTGTTTATGAACTTATAGCTTAATGGAATTGG TGATACCATATGATATCCATTACAATTGATGTCAGCTCTTTGGAATTTGGATAATTCTTGTTTGGATTAACTGTAAAGAA ATGTAATTTTCTCTGTTTAATATCTTCTAGAATTAGCACCAGGGTTTTTTGTATAAACCTTTTGTTTTTGTGCTGATAAT TGCAGCTGTAGGGTTAATTACAATAAAACTTCACTGTGAAAACCTGCAATACTATGGAGCCTGAAGCTGACTATAAAGAT AGCTCTCTTGTTCTGATTAAGCAAGGAGCTGAAGCTGTAAGTATCAACCTCTCCCTGGATTTGTAGAAGCAATTAGCACC TACACTTATATGTAAAAACTCAATCTTTTCTTTTTTTTACTGGTGCACCCACCTTGTAAGTGCAATCATTCCTCGTTTTC TATAAGCAATTGATTTCTACACATTGGATATGGTTCAAACATAAGTTTGGGAAATTTTCCATTCACCAAAGTCAAGTAGT TATAAAGTAGAAAGATTATTTGGGTGGAGTTTTCCTTTCACCAAAATTTAAGTTTGTGGTGACGCTAGTTAGTTGATTTA ATTTTGAGAGAAGTGAAAGTTGTTTTACTTTTTCACTAAGAATAATTCATTTTAGGTGTGGAATCCACACAATATATTTA TATTTACACTTCAAAAGTACTTCTATCTTTCCATCCAAAACTTACTTTTTTAATATCAATTCTAAGGACTGATCGATTCT CCCAAAATTAATTTTTGCTAAACAAATTTTCCAAAAAGTATTTCTACAATTCTATTATACTCTGAAACAAACGTTTCTTT GTCTTTTCTTGTTTTGCATACTTCTATATTGGACCTGCAATAGATGCAAATTCATATGGCTTTTTTATGTTCTTTTTCAG AGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAGGTCTGTTATCAAGGAACGTTTCTCAAAGAAATACAGACATCCAATTTT GGATTCTAAGTTGACACTCAAGCGCTTAAATGCGGTCAGAGTTAGATAAAATTGCATTAATTTTAGTTCTGATGAAGTTC TTTATATTTGTCCGTGTCCAGTGCATGTCTTGAATACTTTGTTCCATTAATTAATTGTTGGAGCAGGAGGCTAGGTGCAT GACCAAAGCAAGGCGCCTTGGGGTTCGTACTCCCGTGCTTTATGCTGTGGATCCTGTTGTGCACACATTAACATTTGAAT ATGTTGACGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCTCTTGGTGTCAACGAAGAACGTATGGGCAACATT GCGTCCCAAATTGGTGATGCAATTGGAAAGTTGCATGATGGAGGTCTTGTTCATGATGATTTAACTACATCAAACATGTT ATTGAAGAATGATACCAATCAGTTGGTGAGTTCATTCATATCTTCATAGCTCCAGATATCCAGTAATATCCATTACACTT ACTCAGGTTATGCAATATGAGAAGTATAATCAACTTGTGTTACAAAAGTTGAGTGTATTTTATCTAGGTTCTTATTGACT TTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAGGCTGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATG CATTCTTCATGTGGCAATGTGGTAAGCCAACTTCTCATTTTCCCCTTAGTCCTAACTGTTATGCTGTAAAATTTAAGGAG ATGAAAACATGAATATGCTTGGCTTGCATGTATTGAGAATTTGAATTGGAATGCATTCCATATGAGGTGAGCTCTTTATC TCACAAATAAACTTATCCTTGACCAACAATTATGCTTTCATTTGTACCAAGTGAACTTACTTGCCTTTTGGTCTAACAAG GTTGAGACTAACTTAACAAGCCCCAAAGGTTTGTTCTGCTATGATATGGTTTCTGCATGGACACACGGAAGTTATGAACA AGTTATCAATTATCAATTGACTTACATGTTTTAATATCATAATTTGGTCTGGACAGATGGATCAGATACTTGCAGCATAC CGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGGTGCTGCTTTACTCTTGTTTAAAATTAAGAC ATTTTCTTCAAGAACTAGTGCTTACTTGCTTGCCTTTTCTAACTTGTAGTGCGACAAAGAGGACGAAAGAGGACCATGGT TGGGTGATTCTTTCTCAAACTTCATTTCCATATTTGAGTAAACATGAGGATGACAATCAGTGAATGTTAGTAATGTAATC TATGTTTAACTTCTCTGTTTTTGCATATTTGTAATATGCACATCTATTACAGTTCTGGAGAAATGCAGCGACATTTGAAC TTCTTATTGGCG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0106200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGCCTGAAGCTGACTATAAAGATAGCTCTCTTGTTCTGATTAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTC TTTTGTGGGAAGGAGGTCTGTTATCAAGGAACGTTTCTCAAAGAAATACAGACATCCAATTTTGGATTCTAAGTTGACAC TCAAGCGCTTAAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGCCTTGGGGTTCGTACTCCCGTGCTTTATGCTGTG GATCCTGTTGTGCACACATTAACATTTGAATATGTTGACGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCTCT TGGTGTCAACGAAGAACGTATGGGCAACATTGCGTCCCAAATTGGTGATGCAATTGGAAAGTTGCATGATGGAGGTCTTG TTCATGATGATTTAACTACATCAAACATGTTATTGAAGAATGATACCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGC TTCACTTCAACTCTACCGGAAGATAAGGCTGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATGCATTCTTCATG TGGCAATGTGATGGATCAGATACTTGCAGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGC AAGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGGTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0106200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEPEADYKDSSLVLIKQGAEARVFESSFVGRRSVIKERFSKKYRHPILDSKLTLKRLNAEARCMTKARRLGVRTPVLYAV DPVVHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQIGDAIGKLHDGGLVHDDLTTSNMLLKNDTNQLVLIDFGLS FTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12209
1 226 226 7.1E-135
IPR022495
PANTHER
PTHR12209:SF1
1 226 226 7.1E-135 –
ProSiteProfiles
PS50011
9 226 218 14.181
IPR000719
SMART
SM00220
9 225 217 4.8E-4
IPR000719
SUPERFAMILY
SSF56112
14 174 161 4.18E-24
IPR011009
TIGRFAM
TIGR03724
14 220 207 5.6E-60
IPR022495
Gene3D
G3DSA:3.30.200.20
20 92 73 2.1E-23 –
Pfam
PF00069
55 162 108 1.6E-11
IPR000719
Gene3D
G3DSA:1.10.510.10
108 223 116 6.9E-35 –
ProSitePatterns
PS00109
133 145 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0106200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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