Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0108200 |
| Transcript ID | LotjaGi6g1v0108200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT5G37060.1 cation/H+ exchanger 24; Swiss-Prot: sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24; TrEMBL-Plants: tr|A0A151UA60|A0A151UA60_CAJCA K(+)/H(+) antiporter 13; Found in the gene: LotjaGi6g1v0108200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:24635160..24640936) extracted from Lotus japonicus Gifu genome v1.2.
TCCACAACCCTTTGTAGGAACTCTCTCTCTCTCTCTCTCTCACTGAATCTCTTCTCTTTCCTATGTGATTTTGCATGCAA GCTTGTGGTTAATTTCCACAAAATTTCATGCATGACTAGGGTATTCCCAGCACAGCGTTTGCTGCAAACGCCCAATGGAT GGAACCAGCACGTTAATCCTTCACGTGTTCTTCAAGAATACATGAACAGCTCGATTAACGTGTCTGGAACTCCAATTAAC ATTGTGTGTGAGGCAGCCATTGAGGTTCCTAATGTTGGCATCTTTCTTGGTGACAATCCTTTAAAACACTCCTTCTCACT GGTGTTGTTCAACCTCCTTCTCGTCACCACCATCACTCGCATTGTTCGCTTTCTTCTCAAGCCTCTCAGACAACCTAAAA TCATTTCTCAGATCATAGTAAGTGTTCCAATTGCATATGATCATTCTCAATTATGAATTATTAATCCTTATATGAAATTG TATATAATGACACTTTTTGTGGCAAAAGTGTCATTATATACTATTCCTTTTCTTTAATTTAATTCAGGTGTTCTTTTAAT AGTGTCTATAATGTCAAATTTTTGTTTGGGAGGGTTATTATGTTAGTGCATGTTTAGAGCCTGTTTTTTGTTGGGTTGCT TTAGGGGTAACTTATTTGTACTCTTATATTGAGATCTCTTTCTACTGTCAAGTTTAAATGAAATCTTTTGTTGTGGAAAA AAATTGTATGCACTCAAGCGATCAACTAGTGATAGTGTGGGGTTGTTCTGGTTCTGTTCGAGGCCCTATGAATGCAACGG TGTTAAATATTTGACAGGGAGAACTTATACTCTCAAAGTGTAACAAATATTTAATCATATTTTGTCAGATTTTTGCTGTG AAATACCTGCGCAGTCCGAGATTTTCTAAATTCACGCGGTCATGTAATCTGAGTCATTCAATTAAAAATCAATCAACTTA TATTTTAAACTTATATTTGCCGTCCAATCTTAATGAAATATATAAACCGATATCTGTAATTAAATGGATTAGATCCATTT GCATTCGTGAATGCAGTGTATCTCGATTGCAAGAAAACCAAAGTCGCTAAATACTTGATAAAGAGAGCTTATAACAGACA TAAAAAGTGAATTCTGATAAGATGTATGTGTATAATTTTTTTATAGTGCTAGTGCATACTTATAAACTTTTTGTTTCTAA TTGGATGTTTTAAACTTTTCATGTTTTCATAGGGTGGTGTTATTGTTGGACCTTCCTTTCTAGGACGCTATAGGTGGTAT CAACGTCACATTAAACCTGAGTCAACCCAATACCTGATAAACAATCTTGGAGTGATTGGATTCATGTACTTCGTCTTCGT TTATGGGGTGAAGATGGATCCAGGCCTTTTGAAAAAATCAGGAAAATTGCATGTATCTACAGCAATGTTTGGTATAAGTA TTCCCACAATAGCAGTGTTGGTTGTGGCGCTAGTTATGAGAAAGGAGATGTATAAGGACTTAGCTGCACTTTCTTCAGTT GGAATACTTGCAGGGTACTTAGGGATCACAGCATTCCCTGTTCTCTTCAATATCCTTAGAGAGCTTAACCTTCTAAACTC TGATGTGGGGCGAATAGCATTGTCGACAGCATTGATTGGTGATGCATTGGGAGTGTTCACAATCATAGCATTTGAGGCAG GAAGACAAGGAGAAACAAGAGCTGGAAATGCATTGTGGTACATGATTGCTTGTGTGATTATGTCAGTGGTAGTTGTGTTT TGTATTAGGCCAGCAATGGTTTGGATCAATAAGAAAACCCCAGAAGGCCACCCAGTTGATGAGTGTTTTGTGGTTGCCAT TCTTTTAGGGGCTTTTGTGATGGGCTTTCTCACTGACATGTTTGGGATAGCAATTGTGAATGGGTCCTTGTGGTTGGGCT TGGTGGTTCCTGAGGGGCCTCCTTTAGGAGCAACACTAGTGCAGAAGAGCAAGACCATTATGACAGACTTCTTCATGCCA TTTGCATTCACAATGGTGGGGCATTATACTGATATTTTCAGATTGAGGGCTACTGAATGGTCAACTTTGGAACCGTTGTT TCTCATGGTTTTAATAGGATACTTGGCCAAATTCTTTTCCACTTGGCTGGCCACATTCTACTGGCAGATGCCATTCAGAG ATGGACTAACCCTCAGCCTAATTATGAGTTTGAGAGGCCAAGTTGAACTTATATTGTTTGTGCATTTGATGGACAAAAAG GTAAGCTCCACCTTATATTTTTTATATAACATTTTTCACACCTAATTTGTACATAACCATTGTGATCTAGAATATCAACT TGCCATTATGAAAGATTGTGGACATAGTGGTATGAGTTGGAAATCCCTGAAATGCTATGTGCACATTTCGTGTCCCTTCC TTATTTCCCCGATCAAATTGTGTCATGTTAATTGAAAATGAAAAATAGTGTAGTCTCTCATTTAGTTAGCTCTATCCTTT TACTAACATAGTGTTTGGTTGGAAGGAAATGGGGGGGGGGGGCAGAGGAGTTTTTCTAAACTTATCTTGTTTGGTTCAAT ATTCTGAGGTGGGAGGTGGAGAACCAAGGGGAAAAGAATAATCATGTATACATTGTATAGACATATGGATAATATATGTT TCAAGAACTCATCCAATTATTGTGATTTGTGTACAGGTCTTGAGGGTACCAGGATTCACACTATTGGTGATCATGACAAC AATATTGACTGCAACATTCACTCCTCTGATCTCCATATTGTATGATCCAACAAGGCCATACATGGTAAGCCAAAGGAGGA ACCTCCAACACAATCCCCCAGACCAAGAACTTAGAATAGTGTTATGTGTTCTTGACCCTGATGAAACCGTGAGTGGCCTA ATTTATCTACTTGACATCACATGTCCAAGCACAAACAGCCCTCTTTCAGTTTGTGCTCTCAGATTAATCCATCTCGTAGG TCGCGCTACCCCATTGTTCATAGACCATTCAAAACAAGAAGTGCCTCAAGTTTACCATTGGACACACGCCATCCACGCCC TTGAACAATTCCAAGAAATTAAAGGAGAACAAGTGAAGCTCCAATTTTTCACTGCTGTGGCCCCAAAACATACAATGTTC CAAGATATTTGTGAGGTTTCTCTTGAACATGGAGCTTCTTTAATCATCTTACCTTTTAAAAGGGTAGGCCATCATAATCA TGGAGTCAAGACAGTGAACTCACAAGTACTAAATCATGCACCTTGCTCTATTGCAATTCTTGTTGACAAAGGACTTCTTG ATCATGCCAACCCTGTAGGAAGTTCCTTTTGTCATTTTGGACTTAGATTAGCAGTGTTTTTCCTGGGAGGTGCAGATGCT AGAGAGGCTCTTGTTTATGCAGATAGAATGGTTTCCAACCAAGAGGTGTCCTTAACTGTGATACGGTTTCTCTCTCACAA CAATATAGGAGACATTGAAATGGAGAAGAAGCTTGATGACGGAATTGTGACTTGGTTTTGGGTGAAGAATGAGATTAATC AAAGAGTGGTGTACAGAGAGGTTGTGGTTAGAAATGGGGAAGAAACAATTGGAGCTATTCAGTCTATGAATGATGGTGCT TTTGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTGTCCTTCTTACCGGACTATCAGAATGGAGTGAAAATGA AGAGTTGGGACACATAGGAGATTATGTTGCATCTGAAGATTTTTCTGGCACATCTTCTGTTTTAGTAGTTCAACAACAGG TCTTAAGAGGGTGAAATTGGGATCAGCTACTGCATCATGGTGTTGGTCTCAATGGTTAATGTGATAGGAATTTTGTTATT AACTTAGCATTAAGAGATATTATCTAGCCATTTTCAAGGTGCCTAATTAGATAGCTTAATTAACTTGATATATAAGGTCT AGTGTGTTTAGGTAAAGACAAATCAGTGTCTATTAGAAAAAAGAAAAAGAAAATGAGAAAAAGGGGGAAAGATCAAGTTA TATATAGTTTCTCTGTAGAGCTTAGTCAAATTTCTTCTTCCTTCATAGTTTATAGGAATAGTTTGTTAGAAATCAATGGA TTTCTTCAATGGGATCCCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCATTATTAAAATTGAT AATGGAAAAATACAATGAGTATGCTATTTATAGCATAATTGCCTAACTAACTATTAACTATCTACAATGTGGTCCTCATA CTATCCCTACTCACTAAATGTGATCCTTGTATTTTAATATCCTCCCGCAAGCTGGAAGTAGTATTTAGTAGTACATCCAG CTTGAAAATAGAACTAAACAAAAAATGTAATGATGAAAATCAAATTCAGTATATAAGCAGTAGCAATCTTCATAGTCCGC AGCTCTCAAGTCTCAATCCATATCATGTACTCATAAACTGGCAGCCTTCTCTTATCCTCTAAACAGAACTCATTCGGCAT AACAAACATAATGCTTGATCCATCTTGAACCTTGGTTCCAGAGAGGAAAAATTGATTATGGGAAGTTACCATCACTGGTT CACTCTCATCATTAAGAAACTCTGCAGTATTAATACACTGCTGCAGTAGTTGTTGAACTATTTGCTTTATTGCTTCCAAG TACTGATCATGCAAATACTCAAGTAAGCACTTGATGAACAATGTGGCAGCAGCAACAAAAACAAGTGGAATTGAGTTGCC AAACCATAAGAAAACATGAGCAATCACTGCATCAAAAGGCCCTGCCCCAGAAGATCTCTGCCTCCAGATAAGAGCATTTA GCACAAAGAATACTTCAGATGAAATAGCAAGAAATATGGATGTTGTCTTGAGAGTGATTTCCTTCCATTTTATTCCCTTG AACATCTTATAAAGACATAATGAAAAATATCCAGCACAGAATTCAGATATCATCAATTCAATCTCCTTCTCAGCAGTGTT AGCAATGGAGTAAAATGAATCAGTTCTGAAATAAGGAGACATAGGCACTTCTAATGAAAACTTGACATCTTCAACACATA AAAAATTATCTCCTACATTCACAATCAACAATCTCAAGAGCCCAAGTTCTTCTCTGCAACTGTTACAACAGACAAGCACC AATACATCCTGATATATGCTCAAATTTGAAGCACAACCTATTTGTTTATCAAATGACTCAAGCTGAACTTGCTCCAAACT GCTTAATGAGCATCTATCAATCATTGGTGCATTTACACAAACACCTTGTGTGCAGCTCCTGAATCCACCAGGATCAAGTA AAATTGACTTAGAAGAATCTCCTATCATTGTGTCATTTTCACAAACAGCTTGTGGACAACACCAAAAACCATCAATCTCA AGCAACAAGTTCGAACCATTCATCCAATTAAAGGAGAAATCCCATAATCCCAGCCAAGACAATTGAAATTCTTTGATTGA AAGAAGGATTTGAGTTACCTTTGTGACACAACTTTCTCCAAAAGACTGATCGATGATGTGAGGAACATCAATTTGTTGAG TAACAGAATTCTTCATGAGACATGGAGAATAGGAAGATGAATCTGCTCCAAGATTAATCACAGCCTCACTAAAATTTCCA AAAGCATAAGCATTGGTGGCTGGTTTCCATGCCAGAAATTGAACATTCTGATCAGCAAAGAACGAAAGACGCGAAATAAG GGAAGATGCTACACCAAGATCAGTGGTCGACATTGAATCAGAAGCAATGGCTTCTTCCACGAGAGAAATTGATGAAGCGG AAGCTTCAAGAATTTTC
CDS sequence (LotjaGi6g1v0108200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTAGGGTATTCCCAGCACAGCGTTTGCTGCAAACGCCCAATGGATGGAACCAGCACGTTAATCCTTCACGTGTTCT TCAAGAATACATGAACAGCTCGATTAACGTGTCTGGAACTCCAATTAACATTGTGTGTGAGGCAGCCATTGAGGTTCCTA ATGTTGGCATCTTTCTTGGTGACAATCCTTTAAAACACTCCTTCTCACTGGTGTTGTTCAACCTCCTTCTCGTCACCACC ATCACTCGCATTGTTCGCTTTCTTCTCAAGCCTCTCAGACAACCTAAAATCATTTCTCAGATCATAGGTGGTGTTATTGT TGGACCTTCCTTTCTAGGACGCTATAGGTGGTATCAACGTCACATTAAACCTGAGTCAACCCAATACCTGATAAACAATC TTGGAGTGATTGGATTCATGTACTTCGTCTTCGTTTATGGGGTGAAGATGGATCCAGGCCTTTTGAAAAAATCAGGAAAA TTGCATGTATCTACAGCAATGTTTGGTATAAGTATTCCCACAATAGCAGTGTTGGTTGTGGCGCTAGTTATGAGAAAGGA GATGTATAAGGACTTAGCTGCACTTTCTTCAGTTGGAATACTTGCAGGGTACTTAGGGATCACAGCATTCCCTGTTCTCT TCAATATCCTTAGAGAGCTTAACCTTCTAAACTCTGATGTGGGGCGAATAGCATTGTCGACAGCATTGATTGGTGATGCA TTGGGAGTGTTCACAATCATAGCATTTGAGGCAGGAAGACAAGGAGAAACAAGAGCTGGAAATGCATTGTGGTACATGAT TGCTTGTGTGATTATGTCAGTGGTAGTTGTGTTTTGTATTAGGCCAGCAATGGTTTGGATCAATAAGAAAACCCCAGAAG GCCACCCAGTTGATGAGTGTTTTGTGGTTGCCATTCTTTTAGGGGCTTTTGTGATGGGCTTTCTCACTGACATGTTTGGG ATAGCAATTGTGAATGGGTCCTTGTGGTTGGGCTTGGTGGTTCCTGAGGGGCCTCCTTTAGGAGCAACACTAGTGCAGAA GAGCAAGACCATTATGACAGACTTCTTCATGCCATTTGCATTCACAATGGTGGGGCATTATACTGATATTTTCAGATTGA GGGCTACTGAATGGTCAACTTTGGAACCGTTGTTTCTCATGGTTTTAATAGGATACTTGGCCAAATTCTTTTCCACTTGG CTGGCCACATTCTACTGGCAGATGCCATTCAGAGATGGACTAACCCTCAGCCTAATTATGAGTTTGAGAGGCCAAGTTGA ACTTATATTGTTTGTGCATTTGATGGACAAAAAGGTCTTGAGGGTACCAGGATTCACACTATTGGTGATCATGACAACAA TATTGACTGCAACATTCACTCCTCTGATCTCCATATTGTATGATCCAACAAGGCCATACATGGTAAGCCAAAGGAGGAAC CTCCAACACAATCCCCCAGACCAAGAACTTAGAATAGTGTTATGTGTTCTTGACCCTGATGAAACCGTGAGTGGCCTAAT TTATCTACTTGACATCACATGTCCAAGCACAAACAGCCCTCTTTCAGTTTGTGCTCTCAGATTAATCCATCTCGTAGGTC GCGCTACCCCATTGTTCATAGACCATTCAAAACAAGAAGTGCCTCAAGTTTACCATTGGACACACGCCATCCACGCCCTT GAACAATTCCAAGAAATTAAAGGAGAACAAGTGAAGCTCCAATTTTTCACTGCTGTGGCCCCAAAACATACAATGTTCCA AGATATTTGTGAGGTTTCTCTTGAACATGGAGCTTCTTTAATCATCTTACCTTTTAAAAGGGTAGGCCATCATAATCATG GAGTCAAGACAGTGAACTCACAAGTACTAAATCATGCACCTTGCTCTATTGCAATTCTTGTTGACAAAGGACTTCTTGAT CATGCCAACCCTGTAGGAAGTTCCTTTTGTCATTTTGGACTTAGATTAGCAGTGTTTTTCCTGGGAGGTGCAGATGCTAG AGAGGCTCTTGTTTATGCAGATAGAATGGTTTCCAACCAAGAGGTGTCCTTAACTGTGATACGGTTTCTCTCTCACAACA ATATAGGAGACATTGAAATGGAGAAGAAGCTTGATGACGGAATTGTGACTTGGTTTTGGGTGAAGAATGAGATTAATCAA AGAGTGGTGTACAGAGAGGTTGTGGTTAGAAATGGGGAAGAAACAATTGGAGCTATTCAGTCTATGAATGATGGTGCTTT TGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTGTCCTTCTTACCGGACTATCAGAATGGAGTGAAAATGAAG AGTTGGGACACATAGGAGATTATGTTGCATCTGAAGATTTTTCTGGCACATCTTCTGTTTTAGTAGTTCAACAACAGGTC TTAAGAGGGTGA
Protein sequence (LotjaGi6g1v0108200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTRVFPAQRLLQTPNGWNQHVNPSRVLQEYMNSSINVSGTPINIVCEAAIEVPNVGIFLGDNPLKHSFSLVLFNLLLVTT ITRIVRFLLKPLRQPKIISQIIGGVIVGPSFLGRYRWYQRHIKPESTQYLINNLGVIGFMYFVFVYGVKMDPGLLKKSGK LHVSTAMFGISIPTIAVLVVALVMRKEMYKDLAALSSVGILAGYLGITAFPVLFNILRELNLLNSDVGRIALSTALIGDA LGVFTIIAFEAGRQGETRAGNALWYMIACVIMSVVVVFCIRPAMVWINKKTPEGHPVDECFVVAILLGAFVMGFLTDMFG IAIVNGSLWLGLVVPEGPPLGATLVQKSKTIMTDFFMPFAFTMVGHYTDIFRLRATEWSTLEPLFLMVLIGYLAKFFSTW LATFYWQMPFRDGLTLSLIMSLRGQVELILFVHLMDKKVLRVPGFTLLVIMTTILTATFTPLISILYDPTRPYMVSQRRN LQHNPPDQELRIVLCVLDPDETVSGLIYLLDITCPSTNSPLSVCALRLIHLVGRATPLFIDHSKQEVPQVYHWTHAIHAL EQFQEIKGEQVKLQFFTAVAPKHTMFQDICEVSLEHGASLIILPFKRVGHHNHGVKTVNSQVLNHAPCSIAILVDKGLLD HANPVGSSFCHFGLRLAVFFLGGADAREALVYADRMVSNQEVSLTVIRFLSHNNIGDIEMEKKLDDGIVTWFWVKNEINQ RVVYREVVVRNGEETIGAIQSMNDGAFDLLIVGRKQGINPVLLTGLSEWSENEELGHIGDYVASEDFSGTSSVLVVQQQV LRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 66 | 66 | - | – | |
| PANTHER | 32 | 803 | 772 | 0.0 | – | |
| PANTHER | 32 | 803 | 772 | 0.0 | – | |
| Phobius | 67 | 85 | 19 | - | – | |
| TMHMM | 68 | 87 | 20 | - | – | |
| Gene3D | 69 | 471 | 403 | 8.2E-66 | ||
| Pfam | 77 | 462 | 386 | 5.2E-37 | ||
| Phobius | 86 | 96 | 11 | - | – | |
| Phobius | 97 | 117 | 21 | - | – | |
| TMHMM | 97 | 116 | 20 | - | – | |
| Phobius | 118 | 128 | 11 | - | – | |
| Phobius | 129 | 149 | 21 | - | – | |
| TMHMM | 129 | 148 | 20 | - | – | |
| Phobius | 150 | 160 | 11 | - | – | |
| Phobius | 161 | 183 | 23 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 184 | 194 | 11 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 195 | 217 | 23 | - | – | |
| Phobius | 218 | 228 | 11 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 229 | 250 | 22 | - | – | |
| Phobius | 251 | 261 | 11 | - | – | |
| Phobius | 262 | 280 | 19 | - | – | |
| TMHMM | 264 | 286 | 23 | - | – | |
| Phobius | 281 | 300 | 20 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 301 | 330 | 30 | - | – | |
| Phobius | 331 | 349 | 19 | - | – | |
| Phobius | 350 | 371 | 22 | - | – | |
| Phobius | 372 | 382 | 11 | - | – | |
| Phobius | 383 | 408 | 26 | - | – | |
| TMHMM | 384 | 406 | 23 | - | – | |
| Phobius | 409 | 413 | 5 | - | – | |
| Phobius | 414 | 435 | 22 | - | – | |
| Phobius | 436 | 446 | 11 | - | – | |
| TMHMM | 445 | 467 | 23 | - | – | |
| Phobius | 447 | 467 | 21 | - | – | |
| Phobius | 468 | 803 | 336 | - | – | |
| CDD | 524 | 632 | 109 | 0.00760865 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0108200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…