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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0114500 |
| Transcript ID | LotjaGi6g1v0114500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Progesterone 5-beta-reductase; TAIR: AT5G58750.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase; TrEMBL-Plants: tr|A0A151UA08|A0A151UA08_CAJCA Uncharacterized protein C757.02c; Found in the gene: LotjaGi6g1v0114500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:27372496..27374572) extracted from Lotus japonicus Gifu genome v1.2.
CAATAACAAAGTGAGGGGTTTTATATCCTCGGCAGAAATTAATCATGTTTGAGCTCTGAACATCTACATTTTCATGTATA TAGTTCTTTGGGTGGGGATTTTCTTACATAAAACGTGAACATGAACCCTTGCTTAAAGAAAATCAAACTTGGACCACTTG AATCAACCTGTCGTCGGCAATAAAAAAAGTGAGTTTGGTTAAATTTATTCAACCATAAAGTACATATTTGTAACCATATT AGAAGGACTCAATAAAATAACACCCTAATGTCTCTTATCTAGCTAACAACCAGCATCTATCCTACTTGGAATTTTCAACT TAAACAGCAAGCTTGCAGGTTCCAACTATGCCAACCCAGAAACACTCCTCAAAAGAAGAGCAATATAGTAAGTCCAAGCA TTATTGTAACCCCAAGTTCCAAATACAAATAATAATGAGGCTCCATTTATCAATTCACCACCATTCATTCATTCCTATAA AATGGTTAAATTTGGAAGGGGAGGGAGAGTACTCAACATCCATCACACCCACCCCATATGGCAATGGAGGAGACAAAAAA TGTTGCTATCATCTTTGGGGTCACTGGACTTGTTGGGAGAGAACTGGCTAAGAGGCTTCTTTCACAATCTTCTTGGAAGG TTTATGGCATAGCTAGAAATCCAGAGAAGCTACCCATTTCCACAAGCCCTTGTTACCATTTCATCTCTTGTAACTTGCTG AGCCCTCTCGAGGCTCAGAAGAAGCTCTCTGGCTTGCATGATGTGACCCATGTATTTTGGGTCACATGGGCAAGACAGTT CCCCTTAGACACCCAAGAGAGTTGTGACCAGAACAAGGCCATGATGTCCAATGCTTTGAGTTCCATGCTCTCAACAGCCA AGAATCTGAAGCATGTTTCCCTTCAGACAGGGACCAAACACTATGTATCCCTTCAGGCCCCTTTTGATGAGGAGAAGAAG CTCCTCTACTACCATGAAGAGTCCCCTAGAATGGGCAAAGTCCATAATTTCTACTATGCTCTTGAGGATTTGCTCATGGA GAAGCTCAATGGTAAAATTTCTTGGTCTGTGCACAGGCCTGGTTTATTGTTTGGAAGTTCTGTTAGATCATTCTATAACT TCATGGGTAGCTTGTGTGTTTATGGGACTATTTGCAAACACCTGGAGCTCCCTTTTGTGTTTGGGGGAACTAGGAAGTGT TGGGAGGAGCATTACATTGATGGGTCAGATGCTAGGCTTGTAGCTGACCAGCACATTTGGGCAGCAACAAAAAGTGGCAC AATTGCCACAAATGACCAAGCTTTCAATTCCATTAATGGCCCAGCTTTCACTTGGAAGGAGACTTGGCCAATTATTGGGA AGAAATTAGGGGTGCAAGTCCCACAAGACATGTTTGTTGAGAATTTCTGGTTTTCTAAAGCCATGCTTGAGCAGCAGCAA GTTTGGGAAGAGATTGTGGAAGAAAATGGGTTGGTGCACACAAGTGTGGGAGATTTGGCTAATTGGGAATTTCTTGATGC ATTGTTTAGATTCCCTTTCAAGCTCTTGGGGAGCAGAGATAAAGTTGATGAGTTTGGCTTTGCTGCAAGGTACAAGACAT TGAATTCAATGTTGTATTGGATTGATTGCATGAGAGATGAGAAGGTCATTCCCTAGAGAGTTCTTGCTAGCTTTGACTTC AATTTGGAGTTGTTTGGTGAAGAATTTATGGAGCACCATAAACCTTAAGAAAATTATTGGCAGGGTCTTGTTTGCATGTG CTTGTTGACATAAACCCTTTATTGCGGCATAGTTTACTAGTTTATCTGCATATGGAGTCATCCAACTTAATAATATATAT AGCTTCTTTTGCACATCACTGTCCCCTGGTATTACTTGTTTTCAGCCACAAGTTGTGGCGTGGCTTTGTCTTCTCCATGC ACTAACAATAACATATTGTTTTGGTGGCTCTATCATTGGCTTAATTAAAAGAATTTTTTTTAGTACATGGTCTCAAATCA CACTTTATTGATCAAAGATGCAGGTAGTTGGTTTTTGTCTTTTCCACTAGGCAACTATGATATTTAAATTTCGTTTT
CDS sequence (LotjaGi6g1v0114500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATGGAGGAGACAAAAAATGTTGCTATCATCTTTGGGGTCACTGGACTTGTTGGGAGAGAACTGGCTAAGAGGCT TCTTTCACAATCTTCTTGGAAGGTTTATGGCATAGCTAGAAATCCAGAGAAGCTACCCATTTCCACAAGCCCTTGTTACC ATTTCATCTCTTGTAACTTGCTGAGCCCTCTCGAGGCTCAGAAGAAGCTCTCTGGCTTGCATGATGTGACCCATGTATTT TGGGTCACATGGGCAAGACAGTTCCCCTTAGACACCCAAGAGAGTTGTGACCAGAACAAGGCCATGATGTCCAATGCTTT GAGTTCCATGCTCTCAACAGCCAAGAATCTGAAGCATGTTTCCCTTCAGACAGGGACCAAACACTATGTATCCCTTCAGG CCCCTTTTGATGAGGAGAAGAAGCTCCTCTACTACCATGAAGAGTCCCCTAGAATGGGCAAAGTCCATAATTTCTACTAT GCTCTTGAGGATTTGCTCATGGAGAAGCTCAATGGTAAAATTTCTTGGTCTGTGCACAGGCCTGGTTTATTGTTTGGAAG TTCTGTTAGATCATTCTATAACTTCATGGGTAGCTTGTGTGTTTATGGGACTATTTGCAAACACCTGGAGCTCCCTTTTG TGTTTGGGGGAACTAGGAAGTGTTGGGAGGAGCATTACATTGATGGGTCAGATGCTAGGCTTGTAGCTGACCAGCACATT TGGGCAGCAACAAAAAGTGGCACAATTGCCACAAATGACCAAGCTTTCAATTCCATTAATGGCCCAGCTTTCACTTGGAA GGAGACTTGGCCAATTATTGGGAAGAAATTAGGGGTGCAAGTCCCACAAGACATGTTTGTTGAGAATTTCTGGTTTTCTA AAGCCATGCTTGAGCAGCAGCAAGTTTGGGAAGAGATTGTGGAAGAAAATGGGTTGGTGCACACAAGTGTGGGAGATTTG GCTAATTGGGAATTTCTTGATGCATTGTTTAGATTCCCTTTCAAGCTCTTGGGGAGCAGAGATAAAGTTGATGAGTTTGG CTTTGCTGCAAGGTACAAGACATTGAATTCAATGTTGTATTGGATTGATTGCATGAGAGATGAGAAGGTCATTCCCTAG
Protein sequence (LotjaGi6g1v0114500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMEETKNVAIIFGVTGLVGRELAKRLLSQSSWKVYGIARNPEKLPISTSPCYHFISCNLLSPLEAQKKLSGLHDVTHVF WVTWARQFPLDTQESCDQNKAMMSNALSSMLSTAKNLKHVSLQTGTKHYVSLQAPFDEEKKLLYYHEESPRMGKVHNFYY ALEDLLMEKLNGKISWSVHRPGLLFGSSVRSFYNFMGSLCVYGTICKHLELPFVFGGTRKCWEEHYIDGSDARLVADQHI WAATKSGTIATNDQAFNSINGPAFTWKETWPIIGKKLGVQVPQDMFVENFWFSKAMLEQQQVWEEIVEENGLVHTSVGDL ANWEFLDALFRFPFKLLGSRDKVDEFGFAARYKTLNSMLYWIDCMRDEKVIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 4 | 372 | 369 | 1.5E-193 | – | |
| PANTHER | 4 | 372 | 369 | 1.5E-193 | – | |
| Gene3D | 7 | 372 | 366 | 3.5E-95 | – | |
| SUPERFAMILY | 7 | 286 | 280 | 8.99E-20 | ||
| Phobius | 9 | 19 | 11 | - | – | |
| CDD | 9 | 331 | 323 | 1.58692E-107 | – | |
| Pfam | 11 | 126 | 116 | 1.5E-4 | ||
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 372 | 348 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi6g1v0114500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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