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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0117800 |
| Transcript ID | LotjaGi6g1v0117800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT5G58480.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9FGH4|E139_ARATH Glucan endo-1,3-beta-glucosidase 9; TrEMBL-Plants: tr|I1LLR7|I1LLR7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0117800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:30005874..30013691) extracted from Lotus japonicus Gifu genome v1.2.
GATAAAGATGCTCTTATCAGGTTAGCTTCAAAGCCTCAAACAAAATGTTGCTACTGAGTACTGACTCAAAGATTTCACTT TTACACCTTTCCCCTCCTTTCCCAACATTCATCAAAACTCAGAACTCAGAACCAACGCATCCACACACCTCACTGTCTCT CTTAACTCCCAAATGCCCACCATTTCTCACTTCGTCACATTCACCTTCCTAACCATTTCCACCATGGCCTGTGCAGCTCA AGCTGTGGGTGTGAACTGGGGCACCGAGGCTTCTCACCCTCTACCAGCCCCCAAAGTTGTGAAGCTCTTGAAATCCAACA ACATCAACAAAGTTAAGCTCTTTGATGCCAACTCTAGTGTTCTTCTAGCTCTTTCTGGGTCTAATGTTGCTGTCACTGTG GGTATTCCTAACATTTTGCTCAGAAGCTTGAACTCTTCCAAGAAGGCTGCGGATAGTTGGGTACATGATAATGTAACCCG CTATGTTTCCAATGGGGGAAGTGTAGCTCGAATTGAGTATGTCAAATTTCTTGCTTTTCTATGTTGCCCCTTTTCTTAAT TTGCTCAACTTTTCCTCCATTTTGCAGTCTTATTCTAGTTAATACTTTCCTTTTTTATAAGTAGTTTGGTTCTCAATTCA TGGTTATGGTTGCCTGTTTGACTTTTGATTTTGATTTTGTTTTAGTTGACTTAAAATCCTGAACATTCTATCATTCTAAA GGGTGGTTTTCAATTTCATATTTGTTATTCTGGCCCTTTATGACGTCATGATGAGTGAAACAAGAATTAGTGAGTGTGTG ATGAAGTTTTGTAAATTTATAGAGAACAACGCCATAGGTGTCAAACAGTTGAACAGTTTCTCAATAACCATATGATTTTT CATAGCTTAAATTAAGAACATGAAAATAGACAAATGGAGAATGCTATAACATGTACTTGAAACATGTACTAGGAAGAAAA TAAGATCATGCCAGCCAGGTTTCTTGAATTTGCTTCTTTCATTAAGCCTACATATTGCTCACCCTCCTTTTTCTGCACTA GCTCCCTTGATTCACTACATATTGCAACTTGAATTGGGTGATGTGCTCTGTAAATAAAATTGTCAAAACTCAAAAGTATC TTGCTAGTCCATAAAAGGAGATAGAAACAGGTTGAGAGATCCTATATGTTACTTATATTGCATTTCTTTGAAGAGTGTAT ATTTGAACAAAATAACATTACTACTTTCTCAGGATTGCATACTATGAGCATGAAATGCTGGTTTGCAAACTTGAGAATAC TGATGCTGAGGGCTGACTCAGCCCTTGAGCAAGTGAAGTCCCTGCCCCAAAAAGTATTTTTAGTTGGTAATATTCTCTCA TTAGAAGTAAAGATTTACCTTTTAAAAAATAAGCTCCTTATCTTAAGTCTTAACTAACTCTTTTATTAGTTGACTTCTTT TATCCTATTAACCTTAGTTAAAGTTCATATATTCAATTATTTAATATTATAAACATTAGAATATATGAAAGTCTACAAAA CATTGATTATTATCTAATTGTTCAGCACCTATTAAAGACAGGTTAGCGTTAGTGATGCTTTCAAATGCTGTCTTTCTGCT TTCTAAATTCCAATATAAACCAATCTCCTTTACATGGTACCTAATTTTACATCTCGAAAAGCCAAAAATATCAATTTCAA AGTAAAATATAATAGTTTTATTAAAATTATTTTAATAAATTTGAAAAGGTCTTATCTTAGAATTCATTCTGGGTCTAGAT ATGCTGCTGCTGTAAATGTGTAGTTTCTTTTCTGCCTAAATAATTTACAAACATGTGCCGGCAGCCTTGGCATAAAAACT TGATTTGTTTTTAGGCTGTTTCAATTGTACCCATCTCTTACTTTCTCTGTTTCCATCAAATTAATTTTTCTCTAGGCTTC GGTGATACACTTTTAAGGGCTACGCTAAAAAGCAATTTTATAACATAATCTATTATCTATGGTTCTTCCCCTGTAGTTGT AAAACAAGCATATAACCCTTCATTTTGTCTTCATAACTGCTTCATATTTGAATTCGGAAGGGGGTGCAATTTATATAAGG AAACAAACAAAAATGCTAATTGGTGCAAACAACTTTAGTGTGAACTGAATGAAAGAGAACATGGCTTTTGTCTAGGATTG TGTAACTGTTTTTATCATCTCTGCCCATGTATGTTTTCCAATATTTGATAGATTTTCAATTTTGTCATGATATTTTGGCA TGAAGTCTTTCATAGTAAACAGATCAGAATGGTAAGACGGTCTGTCTCATCTTTGTCTTTGTTAAGAGTTTAATCAGCTA ACAGATCAGAACAAGCTATTGAAGAAATTCCTCTAGGTGGCATGCTTTGGCAGTTTGGCTAGATCAACTGAGCTGCACTC TTGATTTTTTTTTTTTCTTTAATTGAATTCAAAGTTGAAACAACTGGCTATCTCTCTGAAGTATGATTCACTCCCCATAT GGTTCTAAAAATTAATTGTGCAGATATGTTGCTGTTGGTGATGAGCCGTTTCTTAAAAGTTATGGTGAACAGTTTCATCC CTTTGTAATTGGAGCTGCTATGAACATTCAATCAGCTTTAAAGAGAGCTAAACTGGACAGCAGAGTGAAAGTAGTGGTTC CATGTAGCTTTGACAGTTTCGAGTCAGGATCGAACCTCTCCTCAGAAGTGCATTTCAGGCCTGACCTCAACAAAACCATG ATTCAGCTCCTTTCATTTCTTGACAAGCACGGATCCCCTTTCTTTGTGACCATTTCTCCATTCATAACCTTCCTTCAAAC CAAAAACACCTCACTGGACTTTTTCCTCTTTAAAGAAACTGCACGCCCTCGTAATTTCAGCCATAAAACATACAAAAATA GCTTCGACTTGAGTTACGATACAGTGGTTGCTGCATTATCAGAAGTTGGATTTCCTAGCATGGACGTTGTTGTGGCGAAG ATTGGTTGGCCGACGGATGGATCTGCCAATGCAAGCTCATACCTAGCAGAAACATTCATGAAAGGCCTGATAAACCATCT TCATAGAAGCTCGGGGACCCCGCTCAGGCCGCATCAGCAACCGCCCGAAACATACATTTTAAGCCTTCTTGACGAGGACG AAAGGAGCATTGCTGCCGGAAACTTTGAGAGGCATTGGGGATTGTTCACTTTTGATGGCCAAGCAAAGTACCATGTGGAC CTTGGCCAGGGCTCAAAGAGTCTTGTGAATGCTCAAAATGTTGAGTATCTTTCCTCTAAGTGGTGTGTTGTGAACAACAA CAAAGACTTGTCTAATGCAACTGCAAGCGCTTCAGAAGCTTGTGCAAATGCTGATTGTACTGCTCTATCTCCTGGTGGAT CTTGTTTTAACATCAGCTGGCCTAGTAACATATCATATGCTTTTAACAGTTATTATCAGCAGCATGATCAAACAGCAGAA AGCTGTGACTTTGGCGGTCTTGGTTTAATCACCACCGTTGATCCGTCCATGGATCGTTGCAGGTTTCCGATTGAGATTCG CACTTCACAAGCTGAATCTAGCAGGGTGTGCAGCTTCCAGTGGATGATTTTACTTGTAACAACCTTCTTGGCAGTTAGGT AAAGGTGAGGATATTTTTACAGTAGATGTCTATTGTTGAATTAAAATGGTTATCACTTTTTTCTCAGGTAATTTATTCAT GCAGGTTAGGTATTCAGGAATTAGGATGTAACTTTGGTTTCCCTGTTTCATGGTTATTCACCGCATACATTTCTAGTTAA TCAATTGCATGTGGTTGATATGAGATGGCCATCTCCTGAAATTGAGTGATAATCATCACAATCAGTCACAAATGTTCATG ATTGACAATAGATATATAGATGTGAGTATGATCGTGCACTAGCTAGTGCCCCCAATGTAGAGGCGAGGGTATGTCATGAC GGCCAATATATTTATTTAGAAAAGAATTTTTTTTTGGTGGAAGCTGTTTTATTTTTTAATATCTACTTTGAGTGTCATTG AACCAGTGAAACTTGAGAGTCACTATAGGAACTTGAAAACTTCTCTTTCCATGAGATAGAGCTTGAGCTTTTTCCTTCTT CCAGACACATTTTTTACAAAATAAAAAATTTAGGTTTTTGATTTATCCATGGTGGTGGTAGGTAACCAAGATGCTTATCA AAGCTTTATACCGCGTTTACCCTCAAAGCAATTTAAGCTATGGCGGATATCAATTGGGTGGTTCTTGCAATCGAAAGTGT TTGTGGGTTGTGAGGAATGTGAAAGGAGAAGGAGAGTGTTGTTGTGAGAGTCATGGAGGCATAGAGCAGTGGCATTAAGA GAAGAGGATCTGGAGGCAATTGAAGGGGCAAAGGCACATTAAAAAGTAAGCATGAAAGGCAGCAAGTGAAACTTTTGAAA GTGAGTAGATGGGTTTTTACTATTTTAGTGTTACAGGTTGTGTGGTCGGCTTGATTTGGGTGCCATAGGGTGTCCACCCC CAACCTGAGAACAGAACCGAATCACCTTGTGTCCAACTAAATAAACCCAAATCAACACGCCAGCTCGAGTCCAACATGTA TGTTAGAAATCACATGGATTTCTTCAATGGGATACCAAACATAGCGAAAGGGAGAATAGGGAAATTGATTCCAATATTCA TTCATTATTAAATTTGATAGTAAAATATTACAATGGGTTTCCTATTTAAACTAGAATTCTAATATCTCCCCGCAAGCTGG AAGTGGTAAGAATTAACACTACCAGCTTGAAAACATAACTACTCAAAAACAAAGCAAAGCTAAAAACAACAACAAAAAGA ATAAAAGCACAGGATATGCAACAAGGCAAAAACAATCAGCACTTTTGGACAATTTCAGTCCTAACTCAAGACCTTGAGAA GCACCCAATTCTGAAATCTGAACAAGGTTCTGTAGCATATTCAATCTCTAATGAACTGAGAATCCAAGCTGATGACCACC CTGTAGCTTCTGATAAGCCACTAAAAAAAACTTCTGCATTTTCTTCTTCAAATTCTGAATCACAGAAAATCTCTATAGGA ACATGCTGATGAAGGCTTCTAGCTTAATTGGAGTAGCAAGATCTTGTAAGTACTGAATCAGTCTCTCCCTTAGAAAAGAT GATCTTATTTTAATGCCTTTGAGTTTGCTATTCAGTCCCTTCTTGCAGCTCTTGGAACTCAAGCTCTCATATAGACAAGA ACTGAAGAACTTGTCAATTTGTGAGCAATTCTTGACACATGTCTGGTTTCTCTGATAAAAGCTTGATTCAGCAAGCATGC TATCATCTTCATGACCATATCTATAATTGACTCCCACAACTTTCCTTTTCTTCTCAGGTATACCAAGCTGTATTTCCACT GATGCAAATATATTTCCCTACTAGTAATCAGCTTGATCAAATCACAAATTAATTTCCATGCCATCCAAAACCACAACATG TCAACTACTGCAACAACATCAGCATCCTTGCACACAATGAAAATGGGTTGAATTTGAAGAAAAGAGCCTTGGAAGAAGGT CTTTGTATGAAGCAATATGAAGACTTCAAGAACATGTCTAGTAAAATTCAACTTGATAGTGAATGAATTTGATATATTAA TCTCACACTTCAATTGATCAAAACGATGGTGTCTTTTGTGGAAGAATGAACTTGCAGTGAACAAAGACATAGTCTATACC ATTCTTAACCCCAATTCTATCAGCTCTTTTCTTTGAAACCTTTTTACAAACAGCTTGTCTACAACTTCTGGATTCACCAG GATCAAGTGGAATTTTCCTAAACTGATTTCCTATCTGGGAATCATTTCCACAAACACCTTTTGAGCAACACAAGAATCCA TCAAGATCAAACTGAATATTTGCTATCTCTGAGGATTTTTCACAAAAAACATGTGAACAATCCCAAAATCCTCCAGGATC AAATGAAAGTTTCTTAGGAAGATTTACTATCTCAGAGTAATTTCCACAAACACTTGGTGTGCGAAAACAAGGACCATCAA TCTCAAGCAACAAGTTCGAATCATTCTTCCAATCAAAAGAGATATTCAATAATCCTAGCCAAGACAATTGAAATTCTTTG AATGAAAGAAGGATTTGAATTACCTCTGTGATCAAATTCTTCATGAGACACGAATCTGCTTCAAGATTGATCGCACCCTC ACTGAAATCTCCAAAAACATAAGCATTGGTGGCAGGTTTCCATGCCGGAAATTGAACATCTCGATCGACAAAGAAGGAAA GATGTGAAACAGAAGAAGATGCTACAGCAGGATCGGTGGTTGGCGCAGAATCAGAAGCAATGGCTTCGAACACAAACGAA TTCATCGACGACGAACACGAACAAGACAATTCATTGGACGCCGAAGATGAAGATGAATCTGGATTAAGCTACGAATCCAG TAGCAATGAAGAACCAAAGAAACCCTTGCTGAAAGTGCCGAAACTGAAAGGTTCAATCGCCGGTTTCCACGCCGGAATCT TGATTTCTCGATCAGCGAAGAAAGAAACAGGCAAATGATCAAGAATCTTCTCAGAAATCGATTCATCTATGGCAGAATCA AAGCACGCAGATGAAAGAGGAACTGGAGGATGCAAGGCATAATCCTCATCTTGAACCTTCACGAATGATTCTTGCACCAT GAGAGAATCAGAAGCCATGGCCATCGAATCAGAGAACGTTGAACACGAACCAGAGCTCATGACTGAATCAGAGAACAGCG AAAGAGAAGATGAACCTGTGGTGATGTCTCCAAAATCAGCGATCAAATCAGAGAAATTGAAGGAAGATAATCTCGCAGTG GTGCTGCCGCGGCAGCGCTTGAAGCCACGGCGAGCAGGTCGAAGGAAGCGCTCGTAACTCGGCGACGGCGGCGACGGAAG TGGCGGTGAGCTCCATTGGAGCTCTGATACCATGTTAGAAATCACATGGATTTCTTCAATGGGATCCCAAACATAGCGAA ATGGAGAGTAGAGAAATTGATTCCAATATTCATTCATTATCAAATTTGATAGTAAAATATTACAATGGGTTTCCTATTTA TACTAGAATTCTAATAATGTACTTGTTCAATTTGTTTACGGATTTACTAATTGGTCCACCTCCACAACAAAAATCACCCC GTCTACTACACATACCTTTGATAATGAGCAAATTATATCATCAACACTCGTAGCCCTATTGCCCTCCTTACTCCCTCCTC CTTCAAGCTTTTATTAAACACCTCCCCACGATATGTAGAGACAATACCTCCTTTTCTAGAAGGAGTTCTAACACTTTGTT TGGTAGAGAAGAGAGAGATAGAGAAAAGAGAGTAGAGAAGAGAGAAGTTGAGTAGAGAGAAATATGTGAGAAATATAGTA GATTTATAGGTTGTTTGGTATGATAAAAAGAGAAGAGAGATAGAGAAGAGAGAGACCCCTAACTACCCTAACACTCCGTT TGGTAGAGAAGAGAGAGATAGAGAAGAGAGAGTAGAGAAGAGAGAAGTTGAGTAGAGAGAAATATGTGAGAAATAGAGTA GATTTAGAGGTTGTTTGGTATGATAGAGATAAGGGAGAGGGGGAAGAGAAATAATGAGGTGGAAGAGAGAAAAAAAGTTA ACTTTTCATTAAAATATTTTTTTAATGTCAGAATGCAAATAGTGGCGGTTCTAAACCGCCACTAAAAACAAGAAACGGAA AATGAAAAGTAAAAGTGGTGTCAGAATGCAGATAGTGGCGGTTTTAACCGCCACTAAATGCACAGAATAAAAAAAAGGAG GAGCAGCCATCATTTCTCTTCGCAAAACGCGAAGAGAACAAAAAGGTGAAAATCTCCA
CDS sequence (LotjaGi6g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCACCATTTCTCACTTCGTCACATTCACCTTCCTAACCATTTCCACCATGGCCTGTGCAGCTCAAGCTGTGGGTGT GAACTGGGGCACCGAGGCTTCTCACCCTCTACCAGCCCCCAAAGTTGTGAAGCTCTTGAAATCCAACAACATCAACAAAG TTAAGCTCTTTGATGCCAACTCTAGTGTTCTTCTAGCTCTTTCTGGGTCTAATGTTGCTGTCACTGTGGGTATTCCTAAC ATTTTGCTCAGAAGCTTGAACTCTTCCAAGAAGGCTGCGGATAGTTGGGTACATGATAATGTAACCCGCTATGTTTCCAA TGGGGGAAGTGTAGCTCGAATTGAATATGTTGCTGTTGGTGATGAGCCGTTTCTTAAAAGTTATGGTGAACAGTTTCATC CCTTTGTAATTGGAGCTGCTATGAACATTCAATCAGCTTTAAAGAGAGCTAAACTGGACAGCAGAGTGAAAGTAGTGGTT CCATGTAGCTTTGACAGTTTCGAGTCAGGATCGAACCTCTCCTCAGAAGTGCATTTCAGGCCTGACCTCAACAAAACCAT GATTCAGCTCCTTTCATTTCTTGACAAGCACGGATCCCCTTTCTTTGTGACCATTTCTCCATTCATAACCTTCCTTCAAA CCAAAAACACCTCACTGGACTTTTTCCTCTTTAAAGAAACTGCACGCCCTCGTAATTTCAGCCATAAAACATACAAAAAT AGCTTCGACTTGAGTTACGATACAGTGGTTGCTGCATTATCAGAAGTTGGATTTCCTAGCATGGACGTTGTTGTGGCGAA GATTGGTTGGCCGACGGATGGATCTGCCAATGCAAGCTCATACCTAGCAGAAACATTCATGAAAGGCCTGATAAACCATC TTCATAGAAGCTCGGGGACCCCGCTCAGGCCGCATCAGCAACCGCCCGAAACATACATTTTAAGCCTTCTTGACGAGGAC GAAAGGAGCATTGCTGCCGGAAACTTTGAGAGGCATTGGGGATTGTTCACTTTTGATGGCCAAGCAAAGTACCATGTGGA CCTTGGCCAGGGCTCAAAGAGTCTTGTGAATGCTCAAAATGTTGAGTATCTTTCCTCTAAGTGGTGTGTTGTGAACAACA ACAAAGACTTGTCTAATGCAACTGCAAGCGCTTCAGAAGCTTGTGCAAATGCTGATTGTACTGCTCTATCTCCTGGTGGA TCTTGTTTTAACATCAGCTGGCCTAGTAACATATCATATGCTTTTAACAGTTATTATCAGCAGCATGATCAAACAGCAGA AAGCTGTGACTTTGGCGGTCTTGGTTTAATCACCACCGTTGATCCGTCCATGGATCGTTGCAGGTTTCCGATTGAGATTC GCACTTCACAAGCTGAATCTAGCAGGGTGTGCAGCTTCCAGTGGATGATTTTACTTGTAACAACCTTCTTGGCAGTTAGG TAA
Protein sequence (LotjaGi6g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTISHFVTFTFLTISTMACAAQAVGVNWGTEASHPLPAPKVVKLLKSNNINKVKLFDANSSVLLALSGSNVAVTVGIPN ILLRSLNSSKKAADSWVHDNVTRYVSNGGSVARIEYVAVGDEPFLKSYGEQFHPFVIGAAMNIQSALKRAKLDSRVKVVV PCSFDSFESGSNLSSEVHFRPDLNKTMIQLLSFLDKHGSPFFVTISPFITFLQTKNTSLDFFLFKETARPRNFSHKTYKN SFDLSYDTVVAALSEVGFPSMDVVVAKIGWPTDGSANASSYLAETFMKGLINHLHRSSGTPLRPHQQPPETYILSLLDED ERSIAAGNFERHWGLFTFDGQAKYHVDLGQGSKSLVNAQNVEYLSSKWCVVNNNKDLSNATASASEACANADCTALSPGG SCFNISWPSNISYAFNSYYQQHDQTAESCDFGGLGLITTVDPSMDRCRFPIEIRTSQAESSRVCSFQWMILLVTTFLAVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 14 | 462 | 449 | 9.8E-234 | – | |
| PANTHER | 14 | 462 | 449 | 9.8E-234 | – | |
| Phobius | 16 | 24 | 9 | - | – | |
| Gene3D | 23 | 355 | 333 | 3.8E-100 | – | |
| Phobius | 25 | 62 | 38 | - | – | |
| Pfam | 25 | 347 | 323 | 2.0E-57 | ||
| SUPERFAMILY | 25 | 346 | 322 | 4.21E-60 | ||
| Phobius | 63 | 83 | 21 | - | – | |
| Phobius | 84 | 480 | 397 | - | – | |
| SMART | 367 | 449 | 83 | 1.7E-34 | ||
| Pfam | 367 | 435 | 69 | 1.2E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0117800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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