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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0138400 |
| Transcript ID | LotjaGi6g1v0138400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G55760.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q680K8|Y1576_ARATH BTB/POZ domain-containing protein At1g55760; TrEMBL-Plants: tr|I3TAL9|I3TAL9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0138400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40318913..40323268) extracted from Lotus japonicus Gifu genome v1.2.
CCCTGAAATTTTTTACTAACCAATTTAAATCATTTAATATAAGAATTAAAAATTAAGAATTCACAACAGAATTACAGTAA AATTAGTTGTAAAGGATCCATGTTAGTATAGTCACTGATGCAGCATGTCATAGATAATGTCATTCACATTAAATCACAAG TGTCACACGTATTAAAATATGAAAAGATAATAGTCACACACATTAAATATCACAAGATGAAAGGTTGTAACCTTAGACAG GTGGAGAGAATCAAGAAGGTGATCAATTATGGCAATGTGACATAAGTCCCCAAATCCAAAAATGAAGGCAGTTTAGGAAA ATTAGTCAAATTTCTAAGGGACAGATACTTTGCTTCAAAGGACCCCAAAATTAAATATTCTTCTCCCTTCCAAGCTTCAC ACACATGACACAACCAAGGTTCATCTTGATTCCCTATTGGTTCAAGCAATATATTGTAATGTGAGACCTTCTAAAATCAA ACCAACCAATTGACATTTATCATCGACATCCACCATCACCATCCCATACCAATAAAAGTGTTGTGTAAGCCAACAAACAA AACCAACAACAAATCAATCTCTCTCTCTGATTAAAAATATATTTTTATCAGCAGGAAAAAGCTCCCCATCAAATCAAAAG AGTAAAAGCAACCCCACCGTCACCATTGCGTGTTGAAATCATAGAAGGAAACTGCAAAATAATCAAACCCCATGAACCGT GGATTGAATGTTTTTCCAAATATCTTCCTTATTGTCAAATAAATAAGAAAAGAAAAAGGCACTAGTAGTAGTAGTGAACA GAGGAGTGAGTGAGAGAAACAGAGCATCTTCATATGAGGAGTGAAGGTTGTTGGAGAAGAAGAAGAAAGAGTCAACCTGG GAAAGCACGGAGAGTTTTTGTTGGAGGGTATTTTGGATTGCATCCATGAAATCACAGCAGCACTGGCTTTTGCGAATAGG ATGAGCGATTCTGCATACAGGGTTGAAACCACTCCTCGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACCTA CCGAAAATCTGACCCTTTCAAGATCGGAAAGTGGAATTGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCACACACACACACACACACACACACACACAAAACTCAGAAAACTAGTCATGTTTGAGACAGAACACTAGTTAACAGAAA CAGAGGACACTGACAAGTGGGGTTGTGTTGTGTTGGTTTATCAATGAAAAATTGAAACACCCCACATGGCTAAATTGATT TAATTATGTGATAACATGTTTGGTATATGAGAAAGTTTGTTTTTATGCAATTTATTTGATGACCCTTTTGAGATTTTTAG TTGTTTGATGCCAAATTGGAACAGAGAGTGTGAGGCTTACTCTGTTTTGTTTTTGTTTTGTGTGAATTGAAGGCATTTGT CGGTGGAGAAGAACAGGGTTTTGTTTGTGAAATTGTTCCCAGAGATATCCAATCTAACAAGAGACAATCCCCCAATTGCA TCTTTTATTGTTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGTCCCTCACACATCCAGGTCATCAATGTTCTGATTTACT TTTTCTCTTTCACTTTTTCTTGTGGATAGAAAATATTCAATCTATGATTCTGGTATGTAGTTGTATAGTTGAGTATATTT TTTTTCAACAGTTTCTTATGTTGACTGATTGATATTTTTGGTATGGTACAGAGATAAAAGACAAAGTGATCAAGAACAAT GAGGACTTTGTTTGGGCAATTGAGGTTCCTCTTACTGGGAAATTCATAATTGATGTTGAGTTCCTTGATTTGAAGACTGC ATCCCCAAACGTATGTACTACCTAGATATCTCATTATCATTGGTTGTCTATGTAGCATCCATTGCAATTGATAAGTACTT TAAGACAACCAGAATATGAAAGTCTCGCTAAAATCAATTAAGGGTACTAATTGGTTCCATTATTATAATTATGAGCACTT CATTAATAATTAATCCCATTCTTCAGTCATGACGAATAATGAACAATGATGAAGCAAGATGATTAGTGAAAATAGAGTAG TAGGCTAAGCCTGCCTGAGTCAATTATAAAGTTAGCGCATGTTTGGAAATCCTTCTAACAGTTGATTTTGAAGTCAAAAT TAATTGTGAGAAGAAGCTTATGTGAGTAGCTACTCCTTGGCGTCAGAACTTAGAATTGATTCTGAGAAAAGATAAGTTGA TCCAAACATGCATTTAATGTTTCTCTTATATTTTCATTTTGAATGTGAATTTTCAATACAGGGTGGAGAACCTTGCTCTA TTTGGGCTGAAGGGTTTACTCAGACAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGAAAAATGCTAACAGAAGGAATC CACACAGACATCACCATCAATGCTTCTGATGGAACTATAGGAGCTCATCGAGCTGTACTTGCTGCCCGTTCACCCGTGTT CTGCAGCATGTTCTCACACAATCTTCAGGAGAAAGAGCTGTCAACTATAAACATCTCAGACATGTCAATTGAAACTTGCC AAGCTTTTCTCAATTATCTTTATGGAATCATAAAAAATGAAGAGTTTCTAATGCACAGGCTGGCCCTTCTGCATGCAGCC GACAAGTATGACATATCTGATCTGAGAGAGGCATGCCATGAGAGTCTCCTAGAAGATATTGACACAAAGAATGTGCTTGA CAGGCTCCAGCACGCGTCGCTGTATCAGTTGATGAAACTTAAGATGAGCTGCATCCGCTATCTTGTGAAATTTGGTAAAA TATATGAAATCAAGGATGATTTCAATACTTTCCTGCAGAATGCAGATAGGGATCTCATTTCTGAAGTTTTCTATGAAGTT CTTGATGCGTGGAAAGGATTCTGAAGATCATGAAACTTCACAAAGGATTGGAAGACGTTGTGCTATTTAATGTATCAAAG AAATAGATTGTTTGAATTCTAGATGAACGTTATTCTTTGTACTCAGATGGTCTTTTTTTTCAATGATTTCCGTGTACATA TATCTGTCATGCTCTTCATACATAAAACATAAGATGTTATTGTTTACAAAAGATGTACATTGTATGAAAAGAAAAAGAAC ATGTATTCATGAATGCAAATGGTTCTAAATTCTGATGTTGTATTTCATTTCCTTGATTCATAGAATTTTACATGTTAGAT TTTACGCCTACTCATTGAATTATGACACAGAGGAGAAACATTTACCCAGTAGCACATTATTTAGAAGCTAGCACATGATG ATATAATGTCATATATTTCTACTAATTAAGCTTTTTAGAGTAACATCATTATCCCATGCAAAATTTTGATGTCCTCTGAT TTAGGGGCACCACTTACACATCCATAAGACAGTTTATAGAATTTAAAGTAGATTCAAGTCAAGATAGTAAACTAAGTGAT TAAATCCAAACTGGTAGCAAATAAGACACATCCTAATGTTCAGACATGGTTCTCTTCAGTTAGTGTAACTTGATCTCCAT TTTGGCAACATTGTTGTAAAAGAAGTACATAGTATTCTCCTTTTATTGCATACTTAAAACAACAGCACATTGGATGAAAT ATGAGTGCACATAAGAAGGTGATGCAATGGAAAATACTTCGGTTATGTTTGGATATCGGTTGACACAACTGTGAACGGAC ATCATCCGTCACTTCGAGGGAAAAAGTGAATATAACTTTTCTTATGGAAGAGGATGAAAGTCAGCTTACGCTACACTCAC TCACTCAGCAATTCAGCAAAAGTAGCAATGGCGCATATGACTGTGAGTCCATGACAGTGAGGGAATATGCCTCCCACAAA AAGACCAGCACTTATAAGTGCTTCAATATATTTTCCAGCATTACAAGAATTGTATATCATTCTCTTAACAAGTAGAGTAC TTTATTTGGGTCATAACTATAAGACTGTCGTCTGTTCTTATAATCAAATTCAATTTACTTACCATACATGATCCTTTACT ATGTATAGATGAGCGAGGAAGCCATGAGTAATGAGTGTAAGATTAAACAAAAACAGATTAGCCATAATGGGTTTCAATCT TCTCATGTTAGATAACTAGTTATGTTGGAGAGACTAGAGCAAACATAAGTTACATAACACTTCAAGTTCAACCATTTGAT TTAAAAAAGTTTGTTTATCCCAATCATGAGAGTGGTCCTGTAACACAAGGATCCAAATAATTTGAAGATAAAATCCAGAG ACGCCCATGTTCTGCAGTATTCTAATAGAGGATAGCATTCACTTGTATACAACAGACCAAATTTTTTTAGCTGTGGGAAC CTGTAATTCAACTCCTTTTTTGGCTTTTTATTCAAG
CDS sequence (LotjaGi6g1v0138400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCGATTCTGCATACAGGGTTGAAACCACTCCTCGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACCTA CCGAAAATCTGACCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCGGTGGAGAAGAACAGGGTTTTGTTTGTGAAAT TGTTCCCAGAGATATCCAATCTAACAAGAGACAATCCCCCAATTGCATCTTTTATTGTTCGGGTGGTTAGTTCTGTTGGA GATCGCAAGTCCCTCACACATCCAGAGATAAAAGACAAAGTGATCAAGAACAATGAGGACTTTGTTTGGGCAATTGAGGT TCCTCTTACTGGGAAATTCATAATTGATGTTGAGTTCCTTGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGCT CTATTTGGGCTGAAGGGTTTACTCAGACAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGAAAAATGCTAACAGAAGGA ATCCACACAGACATCACCATCAATGCTTCTGATGGAACTATAGGAGCTCATCGAGCTGTACTTGCTGCCCGTTCACCCGT GTTCTGCAGCATGTTCTCACACAATCTTCAGGAGAAAGAGCTGTCAACTATAAACATCTCAGACATGTCAATTGAAACTT GCCAAGCTTTTCTCAATTATCTTTATGGAATCATAAAAAATGAAGAGTTTCTAATGCACAGGCTGGCCCTTCTGCATGCA GCCGACAAGTATGACATATCTGATCTGAGAGAGGCATGCCATGAGAGTCTCCTAGAAGATATTGACACAAAGAATGTGCT TGACAGGCTCCAGCACGCGTCGCTGTATCAGTTGATGAAACTTAAGATGAGCTGCATCCGCTATCTTGTGAAATTTGGTA AAATATATGAAATCAAGGATGATTTCAATACTTTCCTGCAGAATGCAGATAGGGATCTCATTTCTGAAGTTTTCTATGAA GTTCTTGATGCGTGGAAAGGATTCTGA
Protein sequence (LotjaGi6g1v0138400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIVRVVSSVG DRKSLTHPEIKDKVIKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQTRSNAKAIESLGKMLTEG IHTDITINASDGTIGAHRAVLAARSPVFCSMFSHNLQEKELSTINISDMSIETCQAFLNYLYGIIKNEEFLMHRLALLHA ADKYDISDLREACHESLLEDIDTKNVLDRLQHASLYQLMKLKMSCIRYLVKFGKIYEIKDDFNTFLQNADRDLISEVFYE VLDAWKGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 328 | 328 | 1.2E-178 | – | |
| PANTHER | 1 | 328 | 328 | 1.2E-178 | – | |
| Gene3D | 140 | 291 | 152 | 2.3E-36 | – | |
| SUPERFAMILY | 149 | 259 | 111 | 3.92E-25 | ||
| Pfam | 155 | 259 | 105 | 1.1E-22 | ||
| CDD | 162 | 244 | 83 | 1.20865E-22 | – | |
| SMART | 163 | 261 | 99 | 7.0E-21 | ||
| ProSiteProfiles | 163 | 222 | 60 | 15.825 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0138400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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