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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0158500 |
| Transcript ID | LotjaGi6g1v0158500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alcohol dehydrogenase, putative; TAIR: AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|P28304|QOR1_ECOLI Quinone oxidoreductase 1; TrEMBL-Plants: tr|I3T0E6|I3T0E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0158500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43951144..43954133) extracted from Lotus japonicus Gifu genome v1.2.
ATCAGCAGTTTCAGGCTATTCAGAATCCAGAACCTTCGTCTCTCTTAATTTCTTACTCCACCAACCCCACTCACAACCCC TTCTTCTTCATCTTCATTGATCACACTCAGAGCCAGAGCAACATCACTCACCGCGAAAGCTTCGTTATCATCATCATCAT CAGCGACGGAAATGGTGAAAGCTATCAGAGTTCACGAACTCGGTGGTCCCCAGGTGAAGAAGACTCATCATCTTTCACTT TCTAATTCAATCACTCATTCACAGTTTTCACTCACTCATTCATTCATTCAATTCAGATTCTGAAATGGGAGGATGTGGAA ATTGGAGACCCCAAAGAAAATGAAGTGCGTGTGAAGAACAAAGCAATCGGGGTTAATTTCATTGATGTCTACTTTCGGAA AGGGGTTTACAAAGCCTCCACTTCACCCTTCACTCCAGGCATGTCTTGTTGTTCTTCTACCAATTGATCATTCTATTCTA TGTTGTTGTTGTGGTTGTTGTTGTTGTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACCAATTGATC ATTCTATTCTATGTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCTTCTTCTACCAATTGATCATTATATTCTATGTTGTTG TTGTTGTTGTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACCAATTGATCATTCTATTCTATGTTGATGATGTTGT TGTTGTTGTTGTTGTTGTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTACCAATTGATCATT CTATTCTATGTTGTTGTTGTTGTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATTCAATTGTTT TGATGGGGTGGCAGGTATGGAGGCTGTTGGGGTTGTGACTGCTGTGGGTGGTGGACCAACTGGTGTGCAGGTTGGTGATC TTGTTGGTTATGCTGGTCAGCCAATTGGCTCTTATGTTGAGGAGCAGATTCTCCATGCTGGTAAAGTGGTTCCTATTCCT TCCTCAATTGACCCAAGTGTTGCTGCATCGGTGATGCTCAAGGGCATGACTGCTCAATTTTTGCTTCGCCGTTGTTTCAA GGTGAGTTTTTGTTATCTGAATTAGTATGATCCTAGGTTTTAAACTGTGGTTGGTTGGTGCTATTGCTGATATTGTGAAA CATTGTGCAAATATGCGGTTGATGCAGTCGCGATTGCTGCTACTGATACAGCGCATGCTTGAATACACTGTTCAGAATCG TGATGAAGCCAAAATTCACGGTGGAAAGAAGCAATTTCCGTGAGCTTTTGCAACCGTGCCCACCATGATTTTGGCCTCAC AGTGGTTTTACATTGTATCCAAACATGCATATAGTCATGGTATGTGGATCTCCAAAAGACCAAAACCTTGATGTCTCGGC CGCCAATGCGGTCGTGGACCTTGATTTAAAACCATTGTCCTATCTTAAGAAGCCTTTTTTTAACCCTTGGTTAGTCTGCG GTGAATAGTCCTGAAAAGGGTTTTAAGTTTCGGTTGGCAACTGCAATTGCGGCCATAGCGTTAAGGGTTTTTGAGATGGC ACCGCAATTGTGGCTGCATCAACCCACATTTGTCGCTATTTCGTGACATAACACGATGGCAACTGCAATATAAGACCCTG GTTGTGAAGTCTGTTTTGATGAGCCTATGAAAATAGCTTTTGAAACCAGCAAGAATATGAGGTTTTAGCTATGTTTTTAG ATAAGCTGTTTGTGAAAACAAGGCTACTAGTACATTGTTTTCACCCAGACACTCTTCAACTTATTTCATCCAAAGTTTCA TTCTAGCATTAGATGGAGGCCTACAACTGGTATAGTTTTTTTATCTCTAATGTGCAGTAACCAGTGTTGCCCTCATGCAT TCATTGGTGTTTATTTTTCTTCATTAGAGGTGGGCATTTTCTTGCATATTACATTGGTGTTTTCCTGTCTGTTGTTTATC ATAGCGGACTATAGTATCTATTAACTGATGGATTCTTGTTTTATCCTCTAACTAATTCATTTTCTCTTAACTTTGCCCTA CTTTTATATTAAATATAGACTAACATACCTATCACTTTACAGGTTGAACGTGGCCACACAATTCTTGTCCATGCAGCTGC TGGTGGAGTTGGATCCCTATTGTGCCAGTGGGCAAATGCTCTTGGTGCAACTGTTATAGGAACTGTATCCAATGAGGAGA AGGCAGCTCAAGCCAAGGAGGATGGCTGTCATCATGTGATAATTTACAAAGAAGAGGATTTCGTTGCTCGCGTCAATGAA ATTACATCAGGCAATGGAGTTGAAGTGGTCTATGATTCTGTGGGAAAGGATACCTTTGAGGTAGTTCCAATTCTATGCTT ACTACACTAAATGAAATTTCAAAATCAGACTAGGTATAATACTTAATATTAATGGGTGAACTCAATTTTAAGGATTACTT TCAGATTAATACAATCTAGAAGCAAACTTAGAAGCTTATTTTCCTGATGAACTGATTTCTGCCTGATGAAAGCTTTCTTT GTTAGGGCAAATTTGAAAATCAAACTTTGGGTTACTATTTTTCAGTGATATGTGTATGCTCTTTTCAAATTTCAATATTG TTGTGAGAAAAAGTTTGTAAGGAGGTATTCTATGATTTATCCAGGGATCCTTAGCATGCTTGAAGCAACGAGGCTACATG GTGAGTTTTGGGCAATCATCTGGTTCACCTGATCCAGTCTCATTATCCTTCCTTGCTGCAAAATCCCTGTTCCTGACAAG GCCCAGCCTAATGCAATATGTTGTCACTCGGGATGAGCTATTGGAGGCCGCAAGAGAGTTGTTTGCTGCTGTTGCATCTG GTGTCTTGAAGGTGAGGGTCAATCATACTTACCCATTATCTGAGGCTGCAAAAGCACATGAAGACCTGGAGAATAGGAAG ACCTCAGGATCTATTGTGTTGATACCCTAA
CDS sequence (LotjaGi6g1v0158500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACTTTCGGAAAGGGGTTTACAAAGCCTCCACTTCACCCTTCACTCCAGGCATGTCTTGCTGTTGGGGTTGTGAC TGCTGTGGGTGGTGGACCAACTGGTGTGCAGGTTGGTGATCTTGTTGGTTATGCTGGTCAGCCAATTGGCTCTTATGTTG AGGAGCAGATTCTCCATGCTGGTAAAGTGGTTCCTATTCCTTCCTCAATTGACCCAAGTGTTGCTGCATCGGTGATGCTC AAGGGCATGACTGCTCAATTTTTGCTTCGCCGTTGTTTCAAGGTTGAACGTGGCCACACAATTCTTGTCCATGCAGCTGC TGGTGGAGTTGGATCCCTATTGTGCCAGTGGGCAAATGCTCTTGGTGCAACTGTTATAGGAACTGTATCCAATGAGGAGA AGGCAGCTCAAGCCAAGGAGGATGGCTGTCATCATGTGATAATTTACAAAGAAGAGGATTTCGTTGCTCGCGTCAATGAA ATTACATCAGGCAATGGAGTTGAAGTGGTCTATGATTCTGTGGGAAAGGATACCTTTGAGGGATCCTTAGCATGCTTGAA GCAACGAGGCTACATGGTGAGTTTTGGGCAATCATCTGGTTCACCTGATCCAGTCTCATTATCCTTCCTTGCTGCAAAAT CCCTGTTCCTGACAAGGCCCAGCCTAATGCAATATGTTGTCACTCGGGATGAGCTATTGGAGGCCGCAAGAGAGTTGTTT GCTGCTGTTGCATCTGGTGTCTTGAAGGTGAGGGTCAATCATACTTACCCATTATCTGAGGCTGCAAAAGCACATGAAGA CCTGGAGAATAGGAAGACCTCAGGATCTATTGTGTTGATACCCTAA
Protein sequence (LotjaGi6g1v0158500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTFGKGFTKPPLHPSLQACLAVGVVTAVGGGPTGVQVGDLVGYAGQPIGSYVEEQILHAGKVVPIPSSIDPSVAASVML KGMTAQFLLRRCFKVERGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAKEDGCHHVIIYKEEDFVARVNE ITSGNGVEVVYDSVGKDTFEGSLACLKQRGYMVSFGQSSGSPDPVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELF AAVASGVLKVRVNHTYPLSEAAKAHEDLENRKTSGSIVLIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 2 | 279 | 278 | 5.7E-12 | ||
| PANTHER | 4 | 281 | 278 | 2.1E-155 | – | |
| PANTHER | 4 | 281 | 278 | 2.1E-155 | – | |
| Gene3D | 12 | 275 | 264 | 9.9E-89 | – | |
| SUPERFAMILY | 22 | 107 | 86 | 6.76E-14 | ||
| CDD | 34 | 281 | 248 | 1.35907E-150 | – | |
| SUPERFAMILY | 70 | 232 | 163 | 4.84E-48 | ||
| Gene3D | 81 | 225 | 145 | 9.9E-89 | – | |
| Pfam | 109 | 217 | 109 | 8.0E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0158500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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